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    FERMENTATION TECHNOLOGY

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    FERMENTATION

    Microbiologists consider fermentation as 'any

    process for the production of a product by means of mass

    culture of micro-organisms'.

    Biochemistsconsider fermentation as 'an energy-

    generating process in which organic compounds act both

    as electron donors and acceptors'; hence fermentation is

    an anaerobic process where energy is produced without

    the participation of oxygen or other inorganic electron

    acceptors.

    Moreover, Fermentationis usually defined as ametabolic process that

    convertssugar to acids, gases and/oralcohol.It is also one method by which organisms derive

    their energy when oxygen is lacking. It occurs inyeast andbacteria,but also in oxygen-starved

    muscle cells, as in the case oflactic acid fermentation.The science of fermentation is known

    aszymology.

    Fermentation Process

    Cellular Derivation o f Energy

    Once the glucose enters cytosol, Glycolysis begins. Glycolysis is a metabolic pathway

    that breaks down glucose.

    The first step, glycolysis, is common to all fermentation pathways:

    C6H12O6+ 2 NAD++ 2 ADP + 2 Pi 2 CH3COCOO

    + 2 NADH + 2 ATP + 2 H 2O + 2H+

    Pyruvateis CH3COCOO. Piisphosphate.TwoADP molecules and two Piare converted

    to twoATP and two water molecules viasubstrate-level phosphorylation. Two molecules

    ofNAD+are also reduced toNADH.

    If oxygen is available Cellular Respiration (oxidative phosphorylation) will proceed

    otherwise Fermentation allows glycolysis to continue.

    In fermentation process, it turns theNADH and pyruvate produced in theglycolysis step

    intoNAD+and various small molecules.

    Fermentation is employed for preservation in a process that produceslactic acid as found in

    such sourfoods (food processing), as well as for producing alcoholic beverages such

    aswine (fermentation in winemaking) andbeer. Fermentation can even occur within the

    stomachs of animals, such as humans.

    Types of Fermentation

    Fermentation reactsNADH with anendogenous,organicelectron acceptor. Usually this is

    pyruvate formed from the sugar during the glycolysis step. During fermentation, pyruvate is

    metabolized to various compounds through several processes:

    http://en.wikipedia.org/wiki/Metabolismhttp://en.wikipedia.org/wiki/Sugarhttp://en.wikipedia.org/wiki/Alcoholhttp://en.wikipedia.org/wiki/Yeasthttp://en.wikipedia.org/wiki/Bacteriahttp://en.wikipedia.org/wiki/Lactic_acid_fermentationhttp://en.wikipedia.org/wiki/Zymologyhttp://en.wikipedia.org/wiki/Zymologyhttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/Phosphatehttp://en.wikipedia.org/wiki/Phosphatehttp://en.wikipedia.org/wiki/Phosphatehttp://en.wikipedia.org/wiki/Adenosine_diphosphatehttp://en.wikipedia.org/wiki/Adenosine_triphosphatehttp://en.wikipedia.org/wiki/Substrate-level_phosphorylationhttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Oxidative_phosphorylationhttp://en.wikipedia.org/wiki/NADHhttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/Glycolysishttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Foodhttp://en.wikipedia.org/wiki/Fermentation_in_food_processinghttp://en.wikipedia.org/wiki/Winehttp://en.wikipedia.org/wiki/Fermentation_in_winemakinghttp://en.wikipedia.org/wiki/Beerhttp://en.wikipedia.org/wiki/NADHhttp://en.wikipedia.org/wiki/Endogenyhttp://en.wikipedia.org/wiki/Organic_compoundhttp://en.wikipedia.org/wiki/Electron_acceptorhttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/File:Fermenting.jpghttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/Electron_acceptorhttp://en.wikipedia.org/wiki/Organic_compoundhttp://en.wikipedia.org/wiki/Endogenyhttp://en.wikipedia.org/wiki/NADHhttp://en.wikipedia.org/wiki/Beerhttp://en.wikipedia.org/wiki/Fermentation_in_winemakinghttp://en.wikipedia.org/wiki/Winehttp://en.wikipedia.org/wiki/Fermentation_in_food_processinghttp://en.wikipedia.org/wiki/Foodhttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Glycolysishttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/NADHhttp://en.wikipedia.org/wiki/Oxidative_phosphorylationhttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Substrate-level_phosphorylationhttp://en.wikipedia.org/wiki/Adenosine_triphosphatehttp://en.wikipedia.org/wiki/Adenosine_diphosphatehttp://en.wikipedia.org/wiki/Phosphatehttp://en.wikipedia.org/wiki/Pyruvatehttp://en.wikipedia.org/wiki/Zymologyhttp://en.wikipedia.org/wiki/Lactic_acid_fermentationhttp://en.wikipedia.org/wiki/Bacteriahttp://en.wikipedia.org/wiki/Yeasthttp://en.wikipedia.org/wiki/Alcoholhttp://en.wikipedia.org/wiki/Sugarhttp://en.wikipedia.org/wiki/Metabolism
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    Ethanol Fermentation, aka alcoholic fermentation, is the production

    ofethanol andcarbon dioxide. It occurs mostly in yeast and it is used to produce

    alcoholic beverages such as wine.

    Lactic Acid fermentation,produces lactic acid and it occurs in most organism including

    humans. It is used to produce beverages such as buttermilk and food like cheese and

    yogurt.

    There are two means of producinglactic acid:

    1. Homolactic Fermentationis the production of lactic acid exclusively

    2. Heterolactic fermentationis the production of lactic acid as well as other acids and

    alcohols.

    Chemistry of Ethanol Fermentation

    Thechemical equation below shows the alcoholic fermentation ofglucose,

    whosechemical formula is C6H12O6. One glucose molecule is converted into

    twoethanol molecules and twocarbon dioxide molecules:

    C6H12O6 2 C2H5OH + 2 CO2

    C2H5OH is thechemical formula forethanol.

    Procedure

    During glycolysis, the energy from the exothermic reaction is used to bind inorganic

    phosphates to ADP and convertNAD+to NADH. The two pyruvates are then broken down into

    two acetaldehydes and give off carbon dioxide as a waste product. The two acetaldehydes are

    then converted to two ethanol by using the H ions from NADH which is converted back toNAD+.

    http://en.wikipedia.org/wiki/Ethanol_fermentationhttp://en.wikipedia.org/wiki/Ethanol_fermentationhttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Lactic_acid_fermentationhttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Chemical_equationhttp://en.wikipedia.org/wiki/Glucosehttp://en.wikipedia.org/wiki/Chemical_formulahttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Chemical_formulahttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Chemical_formulahttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Chemical_formulahttp://en.wikipedia.org/wiki/Glucosehttp://en.wikipedia.org/wiki/Chemical_equationhttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Lactic_acid_fermentationhttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Ethanol_fermentation
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    Chemistry of Lactic Ac id Fermentation

    Lactic Fermentation happens in our muscle cells this is what causes our muscles to burn

    during hard exercise.

    Procedure

    From glycolysis, Pyruvate and NADH enter the fermentation process. Two NADHmolecules provide energy to convert pyruvate into lactic acid. As NADH is used, it is converted

    back toNAD+. Two molecules ofNAD+are recycled back to glycolysis. The recycling ofNAD+

    allows glycolysis to continue.

    Homolactic Fermentation(producing only lactic acid) is the simplest type of

    fermentation. The pyruvate from glycolysis undergoes a simpleredox reaction,

    forminglactic acid.It is unique because it is one of the only respiration processes to not

    produce a gas as a byproduct. Overall, one molecule of glucose (or any six-carbon

    sugar) is converted to two molecules of lactic acid: C 6H12O6 2 CH3CHOHCOOH

    It occurs in the muscles of animals when they need energy faster than theblood cansupply oxygen. It also occurs in some kinds ofbacteria (such aslactobacilli) and

    somefungi. It is this type of bacteria that convertslactose into lactic acid inyogurt,

    giving it its sour taste. These lactic acid bacteria can carry out either homolactic

    fermentation, where the end-product is mostly lactic acid.

    Heterolactic Fermentation, where some lactate is further metabolized and results in

    ethanol and carbon dioxide, acetate, or other metabolic products, e.g.: C 6H12O6

    CH3CHOHCOOH + C2H5OH + CO2

    If lactose is fermented (as in yogurts and cheeses), it is first converted into glucose and

    galactose (both six-carbon sugars with the same atomic formula): C12H22O11+ H2O 2

    C6H12O6

    Heterolactic fermentation is in a sense intermediate between lactic acid fermentation,

    and other types, e.g. alcoholic fermentation. The reasons to go further and convert lactic

    acid into anything else are:

    The acidity of lactic acid impedes biological processes; this can be beneficial to the

    fermenting organism as it drives out competitors who are unadapted to the acidity;

    as a result the food will have a longer shelf-life (part of the reason foods are

    purposely fermented in the first place); however, beyond a certain point, the acidity

    starts affecting the organism that produces it. The high concentration of lactic acid (the final product of fermentation) drives the

    equilibrium backwards (Le Chatelier's principle), decreasing the rate at which

    fermentation can occur, and slowing down growth

    Ethanol, that lactic acid can be easily converted to, is volatile and will readily

    escape, allowing the reaction to proceed easily.CO2is also produced, however it's

    only weakly acidic, and even more volatile than ethanol.

    http://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Redoxhttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Bloodhttp://en.wikipedia.org/wiki/Bacteriumhttp://en.wikipedia.org/wiki/Lactobacillihttp://en.wikipedia.org/wiki/Fungihttp://en.wikipedia.org/wiki/Lactosehttp://en.wikipedia.org/wiki/Yogurthttp://en.wikipedia.org/wiki/Le_Chatelier%27s_principlehttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Carbon_dioxidehttp://en.wikipedia.org/wiki/Le_Chatelier%27s_principlehttp://en.wikipedia.org/wiki/Yogurthttp://en.wikipedia.org/wiki/Lactosehttp://en.wikipedia.org/wiki/Fungihttp://en.wikipedia.org/wiki/Lactobacillihttp://en.wikipedia.org/wiki/Bacteriumhttp://en.wikipedia.org/wiki/Bloodhttp://en.wikipedia.org/wiki/Lactic_acidhttp://en.wikipedia.org/wiki/Redoxhttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotidehttp://en.wikipedia.org/wiki/Nicotinamide_adenine_dinucleotide
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    Acetic acid is acidic, and not as volatile as ethanol; however, in the presence of

    limited oxygen, its creation from lactic acid releases a lot of additional energy. It is a

    lighter molecule than lactic acid, that forms fewer hydrogen bonds with its

    surroundings (due to having fewer groups that can form such bonds), and thus more

    volatile and will also allow the reaction to move forward more quickly.

    If propionic acid, butyric acid and longer monocarboxylic acids are produced, theamount of acidity produced per glucose consumed will decrease, as with ethanol,

    allowing faster growth.

    Aerobic Respirat ion

    Fermentation does not necessarily have to be carried out in an anaerobic environment.

    Even in the presence of abundant oxygen, yeast cells greatly prefer fermentation to aerobic

    respiration, as long as sugars are readily available for consumption (a phenomenon known

    as the Crabtree effect).

    In aerobic respiration, the pyruvate produced by glycolysis is oxidized completely,generating additional ATP and NADH in the citric acid cycle and by oxidative

    phosphorylation. However, this can occur only in the presence of oxygen. Oxygen is toxic to

    organisms that are obligate anaerobes, and is not required by facultative anaerobic

    organisms. In the absence of oxygen, one of the fermentation pathways occurs in order to

    regenerate NAD+; lactic acid fermentation is one of these pathways.

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    Fermentation Technology

    Fermentation technology is the oldest of all biotechnological processes. The term is

    derived from the Latin verb fevere, which means 'to boil' . It is thought to have been first used in

    the late fourteenth century in alchemy, but only in a broad sense. It was not used in the modernscientific sense until around 1600.

    Development of Fermentation Process

    Fermentation has been used by humans for the production of food and beverages since

    theNeolithic age.

    6000BC- Bread making (involving yeast fermentation)

    2500BC-Malting of barley, fermentation of beer in Egypt.

    1787-Fabroni defined fermentation as a decomposition of one substance by another substance.

    1814-Kirchhoff observed that a glutinous component of wheat is capable of converting starch to

    sugar and dextriin.

    1830-Robiquet and Boutron, also Chalard discovered the hydrolysis of amygdalin by bitter

    almonds. Liebig and Whohler (1837) and Robiquet (1836) named the enzyme emulsin.

    1833-Payen and Persoz separated active amylase from malt.

    1837-Berzelius included fermentation under catalytic processes.

    1838-Berzelius proposes the term catalysis, meaning a loosening down.

    1858-Pasteur noted that green mould fermented only dextro tartaric acid and did not attack levo

    tartaric acid.

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    1862-Danielewski separated pancreatic amylase from trypsin by adsorption.

    1870-Liebig developed a purely chemical theory of enzyme action.

    1871-Pasteur showed that living yeast was necessary for fermentation. A difference was madebetween organized ferments such as yeast and lactic acid-producing bacteria and unorganized

    ferments such as pepsin and diastase.

    1878-Kuhne designated the latter class of substances as enzymes, which means in yeast.

    1883-Duclaux introduced the custom designating an enzyme by the substrate on which its

    action was first observed and adding the suffix, -ase.

    1898-Croft-Hill performed the first enzymatic synthesis, that of isomaltose.

    1900-Catalysts of oxidation were considered as enzymes.

    1909-Sorensen pointed out the dependence of enzyme activity on pH.

    19001920Ethanol, glycerol, acetone and butanol produced commercially by large-

    scale fermentation.

    1923-Citric acid fermentation plant using Aspergillus niger by Charles Pfizer.

    1943-Submerged culture of Penicillium chrysogenum opens way for large -scale production

    of penicillin.

    1945-Production through fermentation process scaled up to make enough penicillin to treat

    100,000 patients per year. Beginning of rapid development of antibiotic industry; during World

    War II, research driven by 85% tax on excess profits, encouraged investment in research

    and development for antibiotics.

    1957-Commercial production of natural amino acids via fermentation facilitated the discovery of

    Micrococcus glutamicus (later renamed Corynebacterium glutamicum) Glucose-isomerizing

    capability of xylose isomerase reported

    1960-Lysine produced on a technical scale

    1961-First commercial production of MSG via fermentation

    1965-Corn bran and hull replaces xylose as inducer of glucose (xylose) isomerase in

    Streptomyces phaeochromogenus. Phenyl methyl ester of aspartic acid and phenylalanine

    (aspartame) synthesized at G. D. Searle Co.

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    1967-Clinton Corn Processing ships fi rst enzymatically produced fructose syrup.

    19791980-Energy-saving method for drying ethanol using corn (starch) and cellulose-based

    adsorbents reported.

    1977

    1982- Fermentation ethanol processes adapted by wet millers for fuel grade ethanol

    Fermentation Process in Industries

    Fermented products have applications asfood as well as in generalindustry. Some

    commodity chemicals, such asacetic acid,citric acid, andethanol are made by fermentation.

    Nearly all commercially produced enzymes, such aslipase,invertase andrennet,are made by

    fermentation withgenetically modified microbes.In some cases, production of biomass itself is

    the objective, as in the case ofbaker's yeast and lactic acid bacteriastarter cultures for cheese

    making.

    Classification of Fermentation Process used in Industries

    Solid State Cultures

    Microorganism grows on moist solid surface with little or

    no free water like mushroom. Examples include fermented

    bakery products such as bread or for the maturing of cheese.

    Solid State Fermentation is also widely used to prepare raw

    materials such as chocolate and coffee; typically cacao bean

    fermentation and coffee bean skin removal are SSF processes

    carried out under natural tropical conditions.

    -

    Submerged Cultures

    Uses dissolved substrate e.g. sugar solution or a solid substrate

    suspended in large amount of water to form slurry. Most

    fermentation industries today use the submerged process for the

    production of microbial products.

    Types of Fermentation Process

    The fermentation unit in industrial microbiology is analogous to a chemical plant in the

    chemical industry. A fermentation process is a biological process and, therefore, has

    requirements of sterility and use of cellular enzymic reactions instead of chemical reactions

    aided by inanimate catalysts, sometimes operating at elevated temperature and pressure.

    http://en.wikipedia.org/wiki/Foodhttp://en.wikipedia.org/wiki/Industryhttp://en.wikipedia.org/wiki/Acetic_acidhttp://en.wikipedia.org/wiki/Citric_acidhttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Lipasehttp://en.wikipedia.org/wiki/Invertasehttp://en.wikipedia.org/wiki/Rennethttp://en.wikipedia.org/wiki/Genetic_engineeringhttp://en.wikipedia.org/wiki/Baker%27s_yeasthttp://en.wikipedia.org/wiki/Starter_cultureshttp://en.wikipedia.org/wiki/Starter_cultureshttp://en.wikipedia.org/wiki/Baker%27s_yeasthttp://en.wikipedia.org/wiki/Genetic_engineeringhttp://en.wikipedia.org/wiki/Rennethttp://en.wikipedia.org/wiki/Invertasehttp://en.wikipedia.org/wiki/Lipasehttp://en.wikipedia.org/wiki/Ethanolhttp://en.wikipedia.org/wiki/Citric_acidhttp://en.wikipedia.org/wiki/Acetic_acidhttp://en.wikipedia.org/wiki/Industryhttp://en.wikipedia.org/wiki/Food
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    Industrial fermentation processes may be divided into two main types, with various

    combinations and modifications. These are batch fermentations and continuous

    fermentations.

    Batch fermentations

    A tank of fermenter is filled with the prepared mash of raw materials to be fermented.The temperature and pH for microbial fermentation is properly adjusted, and

    occassionally nutritive supplements are added to the prepared mash. The mash is

    steam-sterilized in a pure culture process. The inoculum of a pure culture is added to the

    fermenter, from a separate pure culture vessel. Fermentation proceeds, and after the

    proper time the contents of the fermenter, are taken out for further processing. The

    fermenter is cleaned and the process is repeated. Thus each fermentation is a

    discontinuous process divided into batches.

    Continuou s fermentation

    Growth of microorganisms during batch fermentation confirms to the characteristic

    growth curve, with a lag phase followed by a logarithmic phase. This, in turn, is

    terminated by progressive decrements in the rate of growth until the stationary phase is

    reached. This is because of limitation of one or more of the essential nutrients. In

    continuous fermentation, the substrate is added to the fermneter continously at a fixed

    rate. This maintains the organisms in the logarithmic growth phase. The fermentation

    products are taken out continuously. The design and arrangements for continuous

    fermentation are somewhat complex.

    Aerobic fermentations

    A number of industrial processes, although

    called 'fermentations',

    are carried on by microorganisms under

    aerobic conditions. In older aerobic processes

    it was necessary to furnish a large surface

    area by exposing fermentation media to air. In

    modern fermentation processes aerobic

    conditions are maintained in a closed

    fermenter with submerged cultures. The

    contents of the fermenter are agitated with au

    impeller and aerated by forcing sterilized air

    (Fig 1).

    Anaerobic fermentations

    Basically a fermenter designed to operate under micro-aerophilic or anaerobic conditions

    will be the same as that designed to operate under aerobic conditions, except that

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    arrangements for intense agitation and aeration are unnecessary. Many anaerobic

    fermentations do, however, require mild aeration for the initial growth phase, and

    sufficient N agitation for mixing and maintenance of temperature.

    Component Parts of a Fermentation Process

    1. Formulation of media (for both inoculum& production fermenter)

    2. Sterilization

    3. Inoculum development

    4. Growth of the organism (optimal conditions)

    5. Extraction / purification of product

    6. Disposal of effluent

    The microbes used for fermentation grow in (or on) specially designedgrowth

    medium which supplies the nutrients required by the organisms. Varieties of media exist, but

    invariably contain a carbon source, a nitrogen source, water, salts, and micronutrients.

    Nutrient sources for industrial fermentation

    Any Microbe requires Water, Oxygen, Energy source, Carbon source, Nitrogen source

    and Micronutrients for the growth.

    Carbon & Energy source + Nitrogen source + O2+ other requirements Biomass + Product +

    byproducts + CO2+ H2O + heat

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    Nutrient Raw material

    Carbon

    Glucose Corn sugar, Starch, Cellulose

    Sucrose Sugarcane, Sugar beet molasses

    Lactose Milk whey

    Fats Vegetable oils

    Hydrocarbons Petroleum fractions

    Nitrogen

    Protein Soybean meal, Cornsteep liquor, Distillers' solubles

    Ammonia Pure ammonia or ammonium salts

    Urea

    Nitrate Nitrate salts

    Phosphorus source Phosphate salts

    The Range of Fermentation Process

    There are five major groups of commercially important fermentations:

    Those that produce microbial cells (or biomass) as the product.

    Those that produce microbial enzymes

    Those that produce microbial metabolites.

    Those that produce recombinant products.

    Those that modify a compound which is added to the fermentation - the transformation

    Some Important Fermentation Products

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    Fermenters

    Industrial fermentations are typically carried

    out in large tanks,

    called fermentersor bioreactor. The heart of the

    fermentation process is the fermenter. For aerobic

    fermentations, air is typically used because it is

    inexpensive to provide enough oxygen for cellular

    respiration. Anaerobic fermentations, such as the

    production of ethanol, typically do not require the

    addition of any air, and only require agitation froma mixer to keep the organisms suspended. Aerobic

    fermentations may be conducted in a variety of fermenters, such as a bubble column or

    apacked bed over which fermentation medium drips (as in the production of vinegar). Cooling is

    typically required, since organisms produce waste heat as part of their metabolism.

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    In general:

    Stirred vessel, H/D 3

    Volume 1-1000 m3(80 % filled)

    Biomass up to 100 kg dry weight/m3

    Product 10 mg/l200 g/l

    Types of fermenter

    Simple fermenters (batch and continuous)

    Fed batch fermenter

    Air-lift or bubble fermenter

    Cyclone column fermenter

    Tower fermenter

    Other more advanced systems, etc

    Fermenter in Antibiotic Production

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    Fermenter in Antibiotic Production

    Flow sheet of a multipurpose fermenter and its auxiliary equipment

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    Typical Fermenter

    Microbes and nutrients are put into the fermenter and air is bubbled through so that the

    microbes can respire aerobically. As carbon dioxide builds up the gas outlet releases it to avoid

    build up of pressure. A water jacket surrounding the fermenter maintains an optimum

    temperature so the proteins do not become denatured. Temperature, pH and oxygen probes are

    linked to a computer which monitors the conditions inside the vessel. Paddle stirrers ensure that

    the microbes, nutrients and oxygen are well mixed and distribute the heat evenly. The product is

    run off from the bottom. It is separated from the microbes and purified so that it can be sold or

    distributed.

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    Microbial Growth Kinetics

    Batch Culture

    Batch culture is a closed system without any inlet or outlet streams as

    nutrients are prepared in a fixed volume of liquid media. The inocula are

    transferred and then the microorganisms gradually grow and replicate.

    As the cell propagates, the nutrients are depleted and end products are

    formed. The microbial growth is determined by cell optical density,

    measured in a spectrophotometer, can be used as a measure of the

    concentration of bacteria in a suspension. As visible light passes through

    a cell suspension the light is scattered. Greater scatter indicates that

    more bacteria or other material is present.

    A growth curve can be divided into four phases: The lag phase shows almost no apparent cell

    growth. This is the duration of time represented for adaptation of microorganism to the new

    environment, without much cell replication and with no sign of growth. The length of the lag

    phase depends on the size of the inocula. It is also results from the shock to the environment

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    when there is no acclimation period (time required for bacteria to adapt to their new

    environment). In exponential growth phase there is an appreciable amount of cells and they are

    growing very rapidly, the cell number exponentially increases. The optical cell density of a

    culture can then be easily detected. The rate of cell synthesis sharply increases. Finally, rapid

    utilization of substrate and accumulation of products may lead to stationary phase where the cell

    density remains constant. In this phase cell may start to die as the cell growth rate balances the

    death rate. The dead cells and cell metabolites in the fermentation broth may create toxicity to

    deactivating remaining cells. At this stage a death phase develops while the cell density

    drastically drops it also shows an exponential decrease in the number of living cells in the media

    while nutrients are depleted.

    During the lag phase dX/dt and dS/dt are essentially zero. However as exponential growth

    phase begins it is possible to measure dX/dt and dS/dt values which are very useful for defining

    important microbial kinetic parameters. The exponential phase may be describe by the

    equation:

    where : is the concentration of microbial biomass

    is time

    is the specific growth rate

    Integrating the equation will give:

    where :is the concentration of microbial biomass

    is the biomass concentration after the time interval

    Taking natural logarithms the equation will becomes:

    A plot of natural logarithm of biomass concentration against time should yield a straight line, the

    slope of which would equal . During the exponential phase nutrients are in excess and theorganism is growing at its maximum specific growth rate .

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    some representative values of for some range of microorganism

    the nature of the limitation of growth may be explored by growing the organism in the presence

    of a range of substrate concentrations and plotting the biomass concentration at stationary

    phase against the initial substrate concentration.

    Concentration

    Where is the concentration of biomass produced

    is the yield factor

    is the initial substrate concentration

    is the residual substrate concentration

    Specific Growth Rate

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    Microbial growth kinetic relationships

    Monod Kinetics

    The most widely used expression for describing specific growth rate as a function of substrate

    concentration is attributed to Monod (1942, 1949). This expression is:

    Where:

    is the residual substrate concentration

    is the substrate utilization constant, numerically equal to substrate concentrationwhen is half .

    some representative values of for some range of microorganism

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    Time-rate-of-change

    Substrate utilization rate

    First order kinetics

    if S > KS

    where substrate utilization rate is a constant

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    Continuous Culture

    In a continuous operation, one or more feed streams

    containing the necessary nutrients are fed

    continuously, while the effluent stream containing thecells, products, and residuals is continuously

    removed. A steady state is established by maintaining

    an equal volumetric flow rate for the feed and effluent

    streams. In so doing, the culture volume is kept

    constant, and all nutrient concentrations remain at

    constant steady state values. The condition in

    continuous culture is different in batch culture due to

    the continuous addition of fresh medium or nutrient to the vessel. Because of this, theexponential growth is prolonged and it will continue until additional substrate is depleted. The

    medium is continuously fed to the culture at a suitable rate in order to get continuous, steady-

    state cell production. The vessel that used as a growth container is continuous culture is called

    bioreactor or chemostat.

    The chemostat setup consists of a sterile fresh nutrient reservoir connected to a growth

    chamber or reactor. Fresh medium containing nutrients essential for cell growth is pumped

    continuously to the chamber from the medium reservoir. The medium contains a specific

    https://controls.engin.umich.edu/wiki/index.php/File:Chemostat.jpg
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    concentration of growth-limiting nutrient (Cs), which allows for a maximum concentration of cells

    within the growth chamber. Varying the concentration of this growth-limiting nutrient will, in turn,

    change the steady state concentration of cells (Cc). Another means of controlling the steady

    state cell concentration is manipulating the rate at which the medium flows into the growth

    chamber. The medium drips into culture through the air break to prevent bacteria from traveling

    upstream and contaminating the sterile medium reservoir.

    The well-mixed contents of the vessel, consisting of unused nutrients, metabolic wastes, and

    bacteria, are removed from the vessel and monitored by a level indicator, in order to maintain a

    constant volume of fluid in the chemostat. This effluent flow can be controlled by either a pump

    or a port in the side of the reactor that allows for removal of the excess reaction liquid. In either

    case, the effluent stream needs to be capable of removing excess liquid faster than the feed

    stream can supply new medium in order to prevent the reactor from overflowing.

    Temperature and pressure must also be controlled within the chemostat in order to maintain

    optimum conditions for cell growth. In order to prevent the reaction mixture from becoming too

    acidic (cell respiration causes the medium to become acidic) or too basic, which could hinder

    cell growth, a pH controller is needed in order to bring pH balance to the system.

    The stirrer ensures that the contents of the vessel are well mixed. If the stirring speed is too

    high, it could damage the cells in culture, but if it is too low, gradients could build up in the

    system. Significant gradients of any kind (temperature, pH, concentration, etc.) can be a

    detriment to cell production, and can prevent the reactor from reaching steady state operation.

    The combination of growth and dilution within the chemostat will ultimately determine the growth

    thus the change in biomass with time is

    Where x is the cell mass, is the specific growth rate and D is the dilution rate. A steady statewill be reached when

    The mechanism underlying the controlling effect of the dilution rate is demonstrated by monod

    equation:

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    At steady state:

    Where is the steady state concentration of substrate in the chemostat.

    Concentration of cells in the chemostat at steady state

    [ { }]

    Note:

    If > D, the utilization of substrate will exceed the supply of substrate, causing the growth rateto slow until it is equal to the dilution rate

    If > d the amount of substrate added will exceed the amount utilized. Therefore the growthrate will increase until it is equal to the dilution rate.

    Steady state at , such as a steady state can be achieve d and maintained as long as thedilution rate does not exceed a critical rate

    Critical dilution rate:

    ( )

    Biomass Product iv i ty

    The productivity of a culture system may be described as the output of biomass per unit time of

    the fermentation.

    Productivity for batch culture

    Where: is the output of the culture

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    is the maximum cell concentration achieved at stationary phase

    is the initial cell concentration at inoculation

    is the time during which the organism grows at

    is the time during which the organism is not growing at and includes lag phase,the deceleration phase and the periods of batching, sterilizing and harvesting.

    Productivity for continuous culture

    Where: is the output of the culture

    is the time period prior to the establishment of a steady state and includes vesselpreparation, sterilization and operation in batch culture prior to continuous operation

    is the time period during which steady state conditions prevail

    Fed Batch Culture

    A fed-batch culture is a semi-batch operation in which the nutrients

    necessary for cell growth and product formation are fed either

    intermittently or continuously via one or more feed streams during the

    course of an otherwise batch operation. The culture broth is harvested

    usually only at the end of the operational period, either fully or partially

    (the remainder serving as the inoculum for the next repeated run). This

    process may be repeated (repeated fed-batch) a number of times if the

    cells are fully viable and productive. Thus, there are one or more feed

    streams but no effluent during the course of operation. The products

    are harvested only at the end of the run. Therefore, the culture volume

    increases during the course of operation until the volume is full. Thereafter, a batch mode of

    operation is used to attain the final results. Thus, the fed-batch culture is a dynamic operation.

    By manipulating the feed rates, the concentrations of limiting nutrients in the culture can be

    manipulated either to remain at a constant level or to follow a predetermined optimal profile until

    the culture volume reaches the maximum, and then a batch mode is used to provide a final

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    touch. In so doing, the concentration of the desired product or the yield of product at the end of

    the run is maximized.

    Nomenclature

    - concentration of microbial biomass

    - time

    - specific growth rate

    - concentration of microbial biomass

    - biomass concentration after the time interval- yield factor

    - initial substrate concentration

    - residual substrate concentration

    - substrate utilization constant

    MEDIA FOR INDUSTRIAL FERMENTATION

    Detailed investigation is needed to establish the most suitable medium for an individualfermentation process, but certain basic requirements must be met by any such medium. Allmicro-organisms require water, sources of energy, carbon, nitrogen, mineral elements andpossibly vitamins plus oxygen if aerobic. On a small scale it is relatively simple to devise amedium containing pure compounds, but the resulting medium, although supporting satisfactorygrowth may be unsuitable for use in a large scale process.

    On a large scale one must normally use sources of nutrients to create a medium whichwill meet as many as possible of the following criteria:

    I. It will produce the maximum yield of product or biomass per gram of substrate used.

    2. It will produce the maximum concentration of product or biomass.

    3. It will permit the maximum rate of product formation.

    4. There will be the minimum yield of undesired products.

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    5. It will be of a consistent quality and be readily available throughout the year.

    6. It will cause minimal problems during media making and sterilization.

    7. It will cause minimal problems in other aspects of the production process particularly aerationand agitation, extraction, purification and waste treatment.

    The use of cane molasses, beet molasses, cereal grains, starch, glucose, sucrose and

    lactose as carbon sources, and ammonium salts, urea, nitrates, corn steep liquor, soya bean

    meal, slaughter-house waste and fermentation residues as nitrogen sources, have tended to

    meet most of the above criteria for production media because they are cheap substrates.

    However, other more expensive pure substrates may be chosen if the overall cost of the

    complete process can he reduced because it is possible to use simpler procedures.

    MEDIUM FORMULATION

    Medium formulation is an essential stage in the design of successful laboratory

    experiments, pilot-scale development and manufacturing processes. The constituents of a

    medium must satisfy the elemental requirements for cell biomass and metabolite production and

    there must be an adequate supply of energy for biosynthesis and cell maintenance. The first

    step to consider is an equation based on the stoichiometry for growth and product formation.

    Thus for an aerobic fermentation:

    Carbon dioxide and energy source + nitrogen source + O2 + other requirement biomass +

    products + CO2 + H2O + heat

    This equation should be expressed in quantitative terms, which is important in the

    economical design of media if component wastage is to be minimal. Thus, it should be possible

    to calculate the minimal quantities of nutrients which will be needed to produce a specificamount of biomass. Knowing that a certain amount of biomass is necessary to produce a

    defined amount of product, it should be possible to calculate substrate concentrations

    necessary to produce required product yields. There may be medium components which are

    needed for product formation which are not required for biomass production. Unfortunately, it is

    not always easy to quantify all the factors very precisely. A knowledge of the elemental

    composition of a process micro-organism is required for the solution of the elemental balance

    equation. This information may not be available so that data which is given in Table 4.2 will

    serve as a guide to the absolute minimum quantities of N, S, P, Mg and K to include in an initial

    medium recipe. Trace elements (Fe, Zn, Cu, Mn, Co, Mo, B) may also be needed in smaller

    quantities. An analysis of relative concentrations of individual elements in bacterial cells and

    commonly used cultivation media quoted by Cooney (1981) showed that some nutrients are

    frequently added in substantial excess of that required, e.g. P, K; however, others are often near

    limiting values, e.g. Zn, Cu. The concentration of P is deliberately raised in many media to

    increase the buffering capacity. These points emphasize the need for considerable attention to

    be given to medium design.

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    Some examples of fermentation media:

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    TYPES OF MEDIA

    1. WATER

    Water is the major component of all fermentation media, and is

    needed in many of the ancillary services such as heating, cooling,

    cleaning and rinsing. Clean water of consistent composition is

    therefore required in large quantities from reliable permanent sources.

    When assessing the suitability of a water supply it is important to

    consider pH, dissolved salts and effluent contamination. The mineral

    content of the water is very important in brewing, and most critical inthe mashing process, and historically influenced the siting of

    breweries and the types of beer produced. Hard waters containing

    high CaSO4 concentrations are better for the English Burton bitter beers and Pilsen type lagers,

    while waters with a high carbonate content are better for the darker beers such as stouts.

    Nowadays, the water may be treated by deionization or other techniques and salts added, or the

    pH adjusted, to favour different beers so that breweries are not so dependent on the local water

    source. Detailed information is given by Hough ci al. (1971) and Sentfen (1989).

    2. ENERGY SOURCES

    Energy for growth comes from either the oxidation of medium components or from light.Most industrial micro-organisms are chemo-organotrophs, therefore the commonest source of

    energy will be the carbon source such as carbohydrates, lipids and proteins. Some micro-

    organisms can also use hydrocarbons or methanol as carbon and energy sources.

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    A. CARBON SOURCES

    Factors influencing the choice of carbon source

    It is now recognized that the rate at which the carbon source is metabolized can often

    influence the formation of biomass or production of primary or secondary metabolites. Fast

    growth due to high concentrations of rapidly metabolized sugars is often associated with low

    productivity of secondary metabolites. This has been demonstrated for a number of processes.

    At one time the problem was overcome by using the less readily metabolized sugars such as

    lactose (Johnson, 1952), but many processes now use semi-continuous or continuous feed of

    glucose or Sucrose. Alternatively, carbon catabolite regulation might be overcome by genetic

    modification of the producer organism.

    The main product of a fermentation process will often determine the choice of carbon

    source, particularly if the product results from the direct dissimilation of it. In fermentations such

    as ethanol or single-cell protein production where raw materials are 60 to 77% of the production

    cost, the selling price of the product will be determined largely by the cost of the carbon source(Whitaker, 1973; Moo-Young, 1977). It is often part of a company development programme to

    test a range of alternative carbon sources to determine the yield of product and its influence on

    the process and the cost of producing biomass and/or metabolite. This enables a company to

    use alternative substrates, depending on price and availability in different locations, and remain

    competitive. Up to ten different carbon sources have been or are being used by Pfizer Ltd for an

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    antibiotic production process depending on the geo graphical location of the production site and

    prevailing economics (Stowell, 1987).

    Examples of commonly used carbon sources

    CARBOHYDRATES

    It is common practice to use carbohydrates as the carbon

    source in microbial fermentation processes. The most widely

    available carbohydrate is starch obtained from maize grain. It is

    also obtained from other cereals, potatoes and cassava. Analysis

    data for these substrates can be obtained from Atkinson and

    Mavituna (1991a). Maize and other cereals may also be used

    directly in a partially ground state, e.g. maize chips. Starch may

    also be readily hydrolysed by dilute acids and enzymes to give a

    variety of glucose preparations (solids and syrups). Hydrolysed

    cassava starch is used as a major carbon source for glutamic acid production in Japan (Minoda,

    1986). Syrups produced by acid hydrolysis may also contain toxic products which may make

    them unsuitable for particular processes.

    OILS AND FATS

    Oils were first used as carriers for antifoams in antibiotic

    processes (Solomons, 1969). Vegetable oils (olive, maize, cotton

    seed, linseed, soya bean, etc.) may also be used as carbon

    substrates, particularly for their content of the fatty acids, oleic,

    linoleic and linolenic acid, because costs are competitive with

    those of carbohydrates. In an analysis of commodity prices for

    sugar, soya bean oil and tallow between 1978 and 1985, it would

    have been cheaper on an available energy basis to use sugar

    during 1978 to mid 1979 and late 1983 to 1985, whereas oil

    would have been the chosen substrate in the intervening period

    (Stowell, 1987).

    Bader et al. (1984) discussed factors favouring the use of oils instead of carbohydrates.

    A typical oil contains approximately 2.4 times the energy of glucose on a per weight basis. Oils

    also have a volume advantage as it would take 1.24 dm3 of soya bean oil to add 10 kcal of

    energy of a fermenter, whereas it would take 5 dm3 of glucose or sucrose assuming that they

    are being added as 50% w/w solutions. Ideally, in any fermentation process, the maximum

    working capacity of a vessel should be used. Oil based fed-hatch fermentations permit this

    procedure to operate more successfully than those using carbohydrate feeds where a larger

    spare capacity must be catered for to allow for responses to a sudden reduction in the residual

    nutrient level (Stowell, 1987).

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    HYDROCARBONS AND THEIR DERIVATIVES

    There has been considerable interest in hydrocarbons. Development work has been

    done using n-alkanes for production of organic acids, amino acids, vitamins and co-factors,

    nucleic acids, antibiotics, enzymes and proteins (Fukui and Tanaka, 1980). Methane, methanol

    and n-alkanes have all been used as substrates for biomass production (Hamer, 1979; Levi et

    al., 1979; Drozd, 1987; Sharp. 1989).

    3. NITROGEN SOURCES

    Factors influencing the choice of nitrogen source

    Control mechanisms exist by which nitrate reductase, an enzyme involved in the

    conversion of nitrate to ammonium ion, is repressed in the presence of ammonia (Brown et al.,

    1974). For this reason ammonia or ammonium ion is the preferred nitrogen source. In fungi that

    have been investigated, ammonium ion represses uptake of amino acids by general and

    specific amino acid permeases (Whitaker, 197M. In Aspergillus nidulans, ammonia also

    regulates the production of alkaline and neutral proteases (Cohen. 1973). Therefore, in mixturesof nitrogen sources, individual nitrogen components may influence metabolic regulation so that

    there is preferential assimilation of one component until its concentration has diminished.

    The use of complex nitrogen sources for antibiotic production has been common

    practice. They are thought to help create physiological conditions in the trophophase which

    favour antibiotic production in the idiophase (Martin and McDaniel, 1977). For example, in the

    production of polyene antibiotics, soybean meal has been considered a good nitrogen source

    because of the balance of nutrients, the low phosphorus content and slow hydrolysis. It has

    been suggested that this gradual breakdown prevents the accumulation of ammonium ions and

    repressive amino acids. These are probably some of the reasons for the selection of ideal

    nitrogen sources for some secondary metabolites.

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    Examples of commonly used nitrogen uses

    Organic nitrogen may he supplied as amino acid, protein or urea. In many instances

    growth will be faster with a supply of organic nitrogen, and a few microorganisms have an

    absolute requirement for amino acids. It might be thought that the main industrial need for pure

    amino acids would be in the deliberate addition to amino acid requiring mutants used in amino

    acid production. However, amino acids arc more commonly added as complex organic nitrogen

    sources which are non-homogeneous, cheaper and readily available. In lysine production,

    methionine and threonine are obtained from soybean hydrolysate since it would be too

    expensive to use the pure amino acids (Nakayarna, 1972a)

    4. MINERALS

    All micro-organisms require certain mineral elements for growth and metabolism

    (Hughes and Poole, 1989, 1991). In many media, magnesium, phosphorus, potassium, sulphur,

    calcium and chlorine arc essential components, and because of the concentrations required,

    they must be added as distinct components. Others such as cobalt, copper, iron, manganese,

    molybdenum and zinc are also essential hut arc usually present as impurities in other major

    ingredients. There is obviously a need for batch analysis of media components to ensure that

    this assumption can be justified, otherwise there may be deficiencies or excesses in different

    batches of media. See Tables 4.7 and 4.8 for analysis of corn steep liquor and Pharmamedia,

    and Miller and Churchill (1986) for analysis of other media ingredients of plant and animal origin.

    When synthetic media are used the minor elements will have to be added deliberately. The form

    in which the minerals are usually supplied and the concentration ranges arc given in Table 4.10.

    As a consequence of product composition analysis, as outlined earlier in this chapter, it is

    possible to estimate the amount of a specific mineral for medium design, e.g. sulphur in

    penicillins and cephalosporins, chlorine in chlortetracycline.

    Chelators

    Many media cannot be prepared or autoclaved without the formation of a visible

    precipitate of insoluble metal phosphates. Gaunt et al. (1984) demonstrated that when the

    medium of Mandels and Weber (1984) was autoclaved, a white precipitate of metal ions formed,

    containing all the iron and most of the calcium, manganese and zinc present in the medium.

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    5. GROWTH FACTORS

    Some micro-organisms cannot synthesize a full complement of cell components and

    therefore require preformed compounds called growth factors. The growth factors most

    commonly required are vitamins, but there may also be a need for specific amino acids, fatty

    acids or sterols. Many of the natural carbon and nitrogen sources used in media formulations

    contain all or some of the required growth factors (Atkinson and Mavituna, 1991a). When there

    is a vitamin deficiency it can often be eliminated by careful blending of materials (Rhodes and

    Fletcher, 1966). It is important to remember that if only one vitamin is required it may he

    occasionally more economical to add the pure vitamin, instead of using a larger bulk of a

    cheaper multiple vitamin source. Calcium pantothenate has been used in one medium

    formulation for vinegar production (Beaman, 1967). In processes used for the production of

    glutamic acid, limited concentrations of biotin must be present in the medium. Some production

    strains may also require thiamine (Kinoshita and Tanaka, 1972).

    6. BUFFERS

    The control of pH may be extremely important if optimal productivity is to be achieved. A

    compound may be added to the medium to serve specifically as a buffer, or may also be used

    as a nutrient source. Many media are buffered at about pH 7.0 by the incorporation of calcium

    carbonate (as chalk). If the pH decreases the carbonate is decomposed. Obviously, phosphates

    which are part of many media also play an important role in buttering. However, high phosphate

    concentrations are critical in the production of many secondary metabolites.

    7. OXYGEN REQUIREMENTS

    It is sometimes forgotten that oxygen, although not added to an initial medium as such, is

    nevertheless a very important component of the medium in many processes, and its availability

    can be extremely important in controlling growth rate and metabolite production.

    The medium may influence the oxygen availability in a number of ways including the following:

    1. Fast metabol ism

    The culture may become oxygen limited because sufficient oxygen cannot be made

    available in the fermenter if certain substrates, such as rapidly metabolized sugars which

    lead to a high oxygen demand, are available in high concentrations.

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    2. Rheology

    The individual components of the medium can influence the viscosity of the final mediumand its subsequent behaviour with respect to aeration and agitation.

    3. Anti foams

    Many of the antifoams in use will act as surface active agents and reduce the oxygen

    transfer rate.

    Hall et al. (1973) have recognized five patterns of foaming in fermentations:

    1. Foaming remains at a constant level through-out the fermentation. Initially it is due to

    the medium and later due to microbial activity.

    2. A steady fall in foaming during the early part of the fermentation, after which it

    remains constant. Initially it is due to the medium hut there are no later effects

    caused by the micro-organism.

    3. The foaming falls slightly in the early stages of the fermentation then rises. There are

    very slight effects caused by the medium but the major effects arc due to microbial

    activity.

    4. The fermentation has a low initial foaming capacity which rises. These effects aredue solely to microbial activity.

    5. A more complex foaming pattern during the fermentation which may be a

    combination of two or more of the previously described patterns.

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    If excessive foaming is encountered there are three ways of approaching the problem:

    1. To try and avoid foam formation by using a defined medium and a modif ication of

    some of the physical parameters (pH, temperature. aeration and agitation). This

    assumes that the foam is due to a component in the medium and not a metabolite.

    2. The foam is unavoidable and antifoam should be used. This is the more standard

    approach.

    3. To use a mechanical foam breaker.

    The Development of Inocula for Industrial Fermentations

    Inocula are living organisms or an amount of material containing living organisms (such as

    bacteria or other microorganisms) that is added to initiate or accelerate a biological process.

    Criteria of Inocula:

    Healthy, active state - minimize lag period

    Available in sufficient quantities

    Suitable morphological form

    Free of contamination

    Stable - retain its product forming properties

    The process adopted to produce an inoculum meeting these criteria is called inoculum

    development.

    Difference between Inoculum and Production medium:

    Inoculum grows in culture medium

    Design of production medium is determined not only by nutritional requirements of

    organism but also by requirements for maximum product formation

    Both media can be of different composition

    Examples of inoculum and production media:

    Process Inoculum Development Medium Production Medium

    Griseofulvin

    Whey powder, Lactose} to give:

    Lactose 3.5%

    Nitrogen 0.05%

    Corn-steep

    Liquor solids 0.38%

    (to give approx. 0.04% N)

    Lactose 7%

    Corn-steep

    Liquor solids to give:

    Nitrogen 0.2%

    Limestone 0.8%

    KH2PO4 0.4%

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    KH2PO4 0.4%

    KCl 0.05%

    KCl 0.1%

    Clavunalic

    Acid

    Soybean flour 1.0%

    Dextrin 2.0%

    Plunoric L81 0.03%

    (Antifoam)

    Soybean flour 1.5%

    Oil 1.0%

    KH2PO4 0.1%

    Vitamin B12

    (g dm-3)

    Sugar beet molasses 70

    Sucrose -

    Betaine -

    NH4H2PO4 0.8

    (NH4)2SO4 2

    MgSO4 0.2

    ZnSO4 0.02

    5-6 Dimethyl-benzimidazole 0.005

    (g dm-3)

    105

    15

    3

    -

    2.5

    0.2

    0.08

    0.025

    LysineCane molasses 5%Corn-steep Liquor 1%

    CaCO31%

    Soybean meal hydrolysate -

    20%-

    -

    1.8%

    Choice of Microorganism:

    Nutritional characteristics - cheap medium

    Optimum environmental conditions

    Productivity - substrate conversion, product yield, rates.

    Amenability to genetic manipulation Ease of handling and safety (suitability)

    Criteria for transfer of inoculum:

    Physiological condition of inoculummajor effect on performance of fermentation

    Indicators of inoculum quality include dissolved oxygen, pH and CO2

    Yeast, Bacteria and Fungicommon inocula

    Safety Measures:

    A. Use of laminar flow cabinets

    Laminar Flows

    Laminar air flows can maintain a working area devoid of contaminants. Many medical

    and research laboratories require sterile working environments in order to carry out specialized

    work. Laminar Flow Cabinets can provide the solution.

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    Laminar Flow Cabinets

    Laminar Flow Cabinets create particle-free working environments by projecting air

    through a filtration system and exhausting it across a work surface in a laminar or uni-directional

    air stream. They provide an excellent clean air environment for a number of laboratory

    requirements.

    Types of Laminar Flow Cabinets:

    a. Horizontal Laminar Flow Cabinets

    Horizontal Laminar Flow Cabinets receive their name due to the direction

    of air flow which comes from above but then changes direction and is

    processed across the work in a horizontal direction. The constant flow of

    filtered air provides material and product protection.

    b. Vertical Laminar Flow Cabinets

    Vertical Laminar Flow Cabinets function equally well as horizontal

    Laminar Flow Cabinets with the laminar air directed vertically downwards

    onto the working area. The air can leave the working area via holes in the

    base. Vertical flow cabinets can provide greater operator protection.

    Laminar Flow Cabinets are used:

    to limit exposure of operators to aerosols and other possible infections

    to protect the culture material from contamination

    B. Asepsis must be maintained

    Asepsis is the state of being free from disease-causing contaminants (such as bacteria,

    viruses, fungi, and parasites) or, preventing contact with microorganisms.

    C. Correct Standards must be applied

    CLASS 1 - none or minimal hazard

    CLASS 2 - ordinary potential hazard

    CLASS 3 - Special hazard, require special containment

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    CLASS 4 - Extremely dangerous, may cause epidemic disease

    CLASS 5 - Pathogens excluded by law

    Methods of Storage and Preservation:

    Storage at reduced temperatures:

    1. Agar Slopes - refrigerator (4 oC), freezer (-20 oC), protect beads (-80 oC)

    2. Liquid nitrogen (-150 to -196 oC)

    Storage in dehydrated form;

    1. Soil + culture dried. Used for fungi

    2. Lyophilization \ freeze drying. Freezing of culture followed by drying under vacuum

    which results in sublimation of cell water

    Quality Control of Preserved Cultures

    Each batch must be routinely tested.

    Whatever method is used in preservation of stock cultures it is important to assess the

    quality of the stocks

    Each batch of cultures should be routinely checked to ensure the propagated strains

    retain the correct growth characteristics, morphology (the study of the form or shape of

    an organism) and product forming properties

    Physiological Aspects

    A. Lag phase - represents dead time with respect to process;

    true lag = all of the population is retarded

    apparent lag = part of population dead/ normal

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    Lag period may be due to:

    1. Change in nutrients on transfer

    2. Change in physical environment

    3. Presence of inhibitor

    4. Spore germination

    5. Viability of culture on transfer

    6. Size of inoculum

    B. Number of generations during the growth cycle

    For example, 6 - 7% biomass initially, then after 4 generations (doubling times), inoculum gives

    100% final biomass.

    Contamination and Instability

    A. Consequences

    Loss of productivity - media must support contaminant

    Out compete and replace - e.g. in continuous systems

    Contaminate product

    Cause breakdown e.g. enzyme action

    Complicate recovery e.g. polymers

    Cause lysis (refers to the breaking down of acell)

    B. Avoidance

    Pure inoculum

    Aseptic conditions

    Sterilize raw materials, additions + reactor, plant equipment etc.

    C. Detection

    Check using Microscope

    Monitor pattern of pH, product, biomass formation

    http://en.wikipedia.org/wiki/Cell_(biology)http://en.wikipedia.org/wiki/Cell_(biology)http://en.wikipedia.org/wiki/Cell_(biology)http://en.wikipedia.org/wiki/Cell_(biology)
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    Inoculum Quality Control

    A. Pure Culture - Tests

    Cultural methods - slow

    Loop dilution- involves the successive transfer (serial dilution) of bacteria fromthe original culture to a series of tubes of liquefied agar

    Streak plates - It is essentially a dilution technique that involves spreading a

    loopful of culture over the surface of an agar plate.

    Differential(designed to show the difference between different organisms grown

    on it) /selective(designed to grow only specific bacteria but not others) plating

    Direct methods - rapid (process requirement)

    Yeast; Morphology, granulation, cell shape and size

    Bacteria; Shape, Gram reaction

    B. Test for Viability

    Viable stain e.g. methylene blue, etc.

    C. Test for Cell Concentration

    Example from brewing - Sedimented volume

    Instability

    Organism has tendency to lose ability to produce product or some desirable

    characteristic (e.g. yeast --> ability to flocculate - colloids come out of suspension in the

    form of floc or flake)

    Can occur at any stage during inoculum protocol (e.g. preservation, storage,

    recovery from storage, in inoculum development unit or in production.

    Can be major reason to reject a culture at industrial scale.

    Any increase in scale (followed by an increased number of generations) will pose

    greater problems if culture tends to degenerate.

    Stability and performance of a culture during fermentation is influenced by:

    Mode of substrate feeding

    Nutrients

    Temperature

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    Osmotic pressure

    Oxygen

    Intracellular product accumulation

    Tolerance to product

    Industrial Production

    A. Development of Brewing Inoculum

    It is common to use yeast from previous fermentation run to inoculate a fresh fermenter.

    Problems:

    1. Strain degeneration

    Degree of flocculence Degree of attenuation

    2. Contamination

    Wash with acid

    3. Propagation

    High level of asepsis

    Environmental conditions may differ from brewing (e.g. media, sugars,

    presence of air, pH, and temp.)

    Reactor

    B. Ino cula for Fung al Process

    Spore suspension - used at early stages

    Inoculum affects morphology of fungus - can influence size of pellet or

    floc.

    Spore Suspension:

    Solidified media e.g. agar media

    Solid media e.g. cereal grains, bran, malt, flaked maize etc. (amount of water,

    relative humidity of air, temp. are important)

    Submerged culture - influenced by media

    C. Asept ic Inocu lat ion o f Plant Fermenters

    Transfer from seed tank to plant-scale reactor is carried out aseptically.

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    Critical Point in the Process and Involves:

    Opening and closing a series of valves in a defined sequence

    Sterilizing pipes\valves (usually with steam) in a defined sequence

    D. Ind ustr ial Product ion of L act ic Starters

    Unit Operations:

    Biomass Production

    - Raw Materials (nutrients)

    - UHT Sterilization

    - Fermentation

    - Cooling: Cold storage

    Finishing Operations

    - Ultrafiltration

    - Centrifugation

    - Freeze/Spray dry

    - Packaged at ambient

    - Aseptic Filling

    - Storage at -20oC

    - Stored in liquid nitrogen

    - Stored in dry ice

    Reference:

    Stanburry, P. F., Whitaker, A. and Hall, S. J., (2003), Principles of Fermentation and

    Technology, 2nd edition