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Molecular & Cellular Immunology 3283 Cancer Immunity Jonathan Irish, Ph.D.

Molecular & Cellular Immunology 3283 Cancer Immunity

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Page 1: Molecular & Cellular Immunology 3283 Cancer Immunity

Molecular & Cellular Immunology 3283

Cancer Immunity

Jonathan Irish, Ph.D.

Page 2: Molecular & Cellular Immunology 3283 Cancer Immunity

Outline

Cancer Immunity - M&IM 3283 - Irish

Surveillance & immunoediting

Hematological malignancies

Cancer immunotherapy

Case study:

TLR9 KO lymphoma model

Page 3: Molecular & Cellular Immunology 3283 Cancer Immunity

1. Are cancer cells ‘non-self’? If so, when do they become non-self

and why does the immune system fail to kill them?

2. How do we therapeutically target cancer cells without harming

immune system cells?

3. Can we vaccinate against cancer cells, break tolerance,

transplant, or engineer anti-cancer cells without generating GVH or

autoimmunity?

4. Do cancer cells modulate the immune system as part of initiation

or progression?

5. Can we treat established, metastatic / disseminated cancer by

activating a systemic immune response?

Example ‘Big Questions’ in Cancer Immunity

Cancer Immunity - M&IM 3283 - Irish

Page 4: Molecular & Cellular Immunology 3283 Cancer Immunity

Timeline of Cancer Milestones – Nearly All Involve Immunology,

the Immune System, or Hematological Cancers

Cancer Immunity - M&IM 3283 - Irishhttp://www.nature.com/milestones/milecancer/timeline.html

Immune related topics we will discuss

Chemotherapy

Page 5: Molecular & Cellular Immunology 3283 Cancer Immunity

Stepwise Model of Tumor Initiation and Progression

Cancer Immunity - M&IM 3283 - Irish

Healthy CellsAltered Cells

(still benign)

Cancer

Cells

Aggressive

Cancer Cells

Normal Tissue Invasive Cancer

Mutation 1 Mutation 2, 3, 4 Mutation 5, 6

Kinzler and Vogelstein, Cell 1996

Page 6: Molecular & Cellular Immunology 3283 Cancer Immunity

Acquired Capabilities of Cancer Cells

Cancer Immunity - M&IM 3283 - Irish

Healthy CellsAltered Cells

(still benign)

Cancer

Cells

Aggressive

Cancer Cells

Normal Tissue Invasive Cancer

Mutation 1 Mutation 2, 3, 4 Mutation 5, 6

Hanahan and Weinberg, Cell 2000 & 2011

Self-sufficient growth

Insensitive to anti-growth

Evading cell death

Limitless replication potential

Growing blood vessels

Tissue invasion

Acquired Capability

Page 7: Molecular & Cellular Immunology 3283 Cancer Immunity

Changes to Cell Signaling Interactions in Cancer

Cancer Immunity - M&IM 3283 - IrishIrish, Kotecha, & Nolan, Nat Rev Cancer 2006

Self-sufficient growth

Insensitive to anti-growth

Evading cell death

Limitless replication potential

Growing blood vessels

Tissue invasion

Acquired Capability

Altered signaling supports

cancer cell survival,

aggressive behavior

↑ RAS/RAF/ERK signaling

↓ STAT1, PTEN signaling

↑ STAT5, ↓ p53 signaling

↑ AKT signaling

↑ VEGF signaling

↑ EGFR, WNT signaling

}Example Signaling Alteration

Page 8: Molecular & Cellular Immunology 3283 Cancer Immunity

Changes to Cell Signaling Interactions in Cancer

Cancer Immunity - M&IM 3283 - IrishIrish, Kotecha, & Nolan, Nat Rev Cancer 2006

Page 9: Molecular & Cellular Immunology 3283 Cancer Immunity

• Immune cells undergo programmatic somatic translocations and

mutations, generating a diverse pool of cells for selection.

Cellular Evolution: Central to Cancer and Immunity

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 10: Molecular & Cellular Immunology 3283 Cancer Immunity

• Immune cells undergo programmatic somatic translocation and

mutation generating a diverse pool that undergoes selection.

• For both cancer and immunity, cells need to acquire new, heritable

cellular features.

• When immune developmental checkpoints are dysregulated we

see cancer, allergy, and autoimmunity.

• Examples of heritable cellular features

Cellular Evolution: Central to Cancer and Immunity

Cancer Immunity - M&IM 3283 - Irish

• Genetic

• Mutations (DNA basepair changes)

• Amplifications / deletions (copy number changes)

• Translocations (might include viruses, retrotransposons)

• Epigenetic

• Methylation / acetylation of DNA, histones

• Prions

• Infection by intracellular pathogens

• Reprogramming, as with iPS cells (Oct4 + Sox2 + Nanog + Klf4 +/- Myc)

Page 11: Molecular & Cellular Immunology 3283 Cancer Immunity

Cancer Immunoediting Model

Cancer Immunity - M&IM 3283 - IrishSchreiber et al., Science 2011

Page 12: Molecular & Cellular Immunology 3283 Cancer Immunity

1. 1909: Paul Ehrlich postulates a model where the immune system

helps prevent the development of cancer.

2. 1957: Richmond Prehn and Joan Main observe differential rejection

of chemically induced tumors (rejected) and spontaneous tumors (not

rejected).

3. 1982: Aline van Pel and Thierry Boon demonstrate that mutagenized

tumor cells generate specific immunity against spontaneous tumors.

4. 2001: Robert Schreiber et al. demonstrate 1) immunodeficient mice

are susceptible to chemically induced and spontaneous tumors, and

2) the immune system selects for cancer escapees (or perhaps

becomes tolerized to the tumor). Importance of IFNγ / STAT1 seen.

5. 2012: Tyler Jacks and Schreiber demonstrate T cell dependent

immunoediting / cancer cell escape (as opposed to tolerization).

Landmarks in Tumor Immune Surveillance

Cancer Immunity - M&IM 3283 - Irishhttp://www.nature.com/milestones/milecancer/full/milecancer03.html

Page 13: Molecular & Cellular Immunology 3283 Cancer Immunity

Immune Status Matters for Cancer

Cancer Immunity - M&IM 3283 - IrishSchreiber et al., Science 2011 / Nature 2001

Page 14: Molecular & Cellular Immunology 3283 Cancer Immunity

Death Receptors and Cancer

Cancer Immunity - M&IM 3283 - IrishAshkenazi, Nat Rev Cancer 2002

Page 15: Molecular & Cellular Immunology 3283 Cancer Immunity

Lpr and Gld: an Informative Pair of Mutations

Cancer Immunity - M&IM 3283 - IrishNagata and Suda, Immunol Today 1995

While establishing a mouse MRI. strain, Andrews et al.12 discovered a mouse

mutant that develops lymphadenopathy and splenomegaly. The autosomal

recessive mutation responsible was located to mouse chromosome 19 (Ref. 13)

and is referred to as lpr (for lymphoproliferation). Later, Roths et al.‘” found a

different mutant with a phenotype similar to lpr, and this mutation was designated

gld (for generalized lymphoproliferative disease).

Page 16: Molecular & Cellular Immunology 3283 Cancer Immunity

TNF and TNFR Superfamily

Cancer Immunity - M&IM 3283 - IrishAshkenazi, Nat Rev Cancer 2002

Page 17: Molecular & Cellular Immunology 3283 Cancer Immunity

Cancer Cells Interfere with Death Receptor Signaling

Cancer Immunity - M&IM 3283 - IrishAshkenazi, Nat Rev Cancer 2002

Page 18: Molecular & Cellular Immunology 3283 Cancer Immunity

Outline

Cancer Immunity - M&IM 3283 - Irish

Surveillance & immunoediting

Hematological malignancies

Cancer immunotherapy

Case study:

TLR9 KO lymphoma model

Page 19: Molecular & Cellular Immunology 3283 Cancer Immunity

1. Cell based therapy (e.g. engineered T cells or DCs)

2. Antibody based targeted therapy that kills tumor cells

(e.g. Rituximab α-CD20, Trastuzumab α-HER2)

3. Vaccines (e.g. idiotype vaccination, vaccines vs. tumor

causing microbes, DNA and other vaccines using tumor

specific or associated antigens, dendritic cell vaccines)

4. Immunomodulation (e.g. ipilimumab α-CTLA4, α-PD-1,

immunotransplant into lymphodepleted host, CD40

gene therapy, CpG DNA, depletion of Tregs or MDSCs)

Tumor Immunotherapy Strategies

Cancer Immunity - M&IM 3283 - Irishhttp://www.nature.com/milestones/milecancer/full/milecancer03.html

DNA vaccines produced in bacteria can function like

unmethylated CpG (innate immune signal, TLR9 pathway)

Page 20: Molecular & Cellular Immunology 3283 Cancer Immunity

Potential Mechanisms of Antibody Based Therapy

Cancer Immunity - M&IM 3283 - IrishVan de Donk et al., Leukemia 2012

FcR polymorphisms govern α-CD20 therapy

Page 21: Molecular & Cellular Immunology 3283 Cancer Immunity

B7-CD28 Family Members Regulate T Cells

Cancer Immunity - M&IM 3283 - IrishSharpe & Freeman, Nat Rev Immunol 2002

Page 22: Molecular & Cellular Immunology 3283 Cancer Immunity

Anti-PD-1 Antibody Therapy in Melanoma

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 23: Molecular & Cellular Immunology 3283 Cancer Immunity

Anti-PD-1 Antibody Therapy in Melanoma

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 24: Molecular & Cellular Immunology 3283 Cancer Immunity

Using the Immune System to Treat Cancer

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 25: Molecular & Cellular Immunology 3283 Cancer Immunity

Cell Based Therapy: Adoptive Immunotherapy

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 26: Molecular & Cellular Immunology 3283 Cancer Immunity

Strategies to Genetically Engineer T Cells

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 27: Molecular & Cellular Immunology 3283 Cancer Immunity

Challenges in Making Effective Anti-tumor T Cells

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 28: Molecular & Cellular Immunology 3283 Cancer Immunity

A Personalized Medicine Strategy

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 29: Molecular & Cellular Immunology 3283 Cancer Immunity

Targeting Cancer Cells and the Immune System

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 30: Molecular & Cellular Immunology 3283 Cancer Immunity

Cancer Vaccines

Cancer Immunity - M&IM 3283 - Irish

What is the difference between a tumor associated antigen

and a tumor specific antigen?

Page 31: Molecular & Cellular Immunology 3283 Cancer Immunity

IL-2 + Vaccination vs. gp100 Melanoma Antigen

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 32: Molecular & Cellular Immunology 3283 Cancer Immunity

IL-2 + Vaccination vs. gp100 Melanoma Antigen

Cancer Immunity - M&IM 3283 - IrishRestifo, Dudley, & Rosenberg, Nat Rev Immunol 2012

Page 33: Molecular & Cellular Immunology 3283 Cancer Immunity

Outline

Cancer Immunity - M&IM 3283 - Irish

Surveillance & immunoediting

Hematological malignancies

Cancer immunotherapy

Case study:

TLR9 KO lymphoma model

Page 34: Molecular & Cellular Immunology 3283 Cancer Immunity

B Cell Lymphoma: Selection Failure

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 35: Molecular & Cellular Immunology 3283 Cancer Immunity

Mechanisms of Immunoglobulin Diversity

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 36: Molecular & Cellular Immunology 3283 Cancer Immunity

Healthy B cell Development

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 37: Molecular & Cellular Immunology 3283 Cancer Immunity

Cellular Origin of B Cell Malignancies

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 38: Molecular & Cellular Immunology 3283 Cancer Immunity

Hallmark IgH + Oncogene Translocations

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 39: Molecular & Cellular Immunology 3283 Cancer Immunity

BCR as an ‘Oncogene’

Cancer Immunity - M&IM 3283 - IrishKüppers, Nat Rev Cancer 2005

Page 40: Molecular & Cellular Immunology 3283 Cancer Immunity

BCR Signaling Checkpoints in Healthy Development

Cancer Immunity - M&IM 3283 - Irish

Page 41: Molecular & Cellular Immunology 3283 Cancer Immunity

Failure to Control Ig Diversity Mechanisms

Cancer Immunity - M&IM 3283 - Irish

Page 42: Molecular & Cellular Immunology 3283 Cancer Immunity

Follicular Lymphoma Tumors

Cancer Immunity - M&IM 3283 - Irish

B Cells(follicular structures)

T Cells(infiltrating tumor)

Follicular lymphoma, flow cytometry

Lymphoma

B cell receptor

Ig light chain (k)

BCL2

Tumor-infiltrating T cells (CD3)

Lymphoma

B cell receptor

Ig light chain (k)

3X

Follicular lymphoma histologyblack stain = T Cells (CD3)

10X

CD20

Irish et al., PNAS 2010

Page 43: Molecular & Cellular Immunology 3283 Cancer Immunity

Validating a Cancer (Signaling) Profile

Cancer Immunity - M&IM 3283 - IrishIrish et al., PNAS 2010

Page 44: Molecular & Cellular Immunology 3283 Cancer Immunity

Key Signaling Events in Follicular Lymphoma

Cancer Immunity - M&IM 3283 - IrishIrish et al., PNAS 2010

Page 45: Molecular & Cellular Immunology 3283 Cancer Immunity

Abnormal Tumor Infiltrating T cell Signaling in FL

Cancer Immunity - M&IM 3283 - IrishIrish et al., PNAS 2010

Follicular lymphoma tumor-infiltrating T cellsHealthy T cells

Patient 1 Patient 2 Patient 3

Unstim

IL-2

IL-7

IL-15

low

high

high

low

low

low

STAT5 phosphorylation

IL-2, IL-7, and IL-15

signaling for 23 FL patients

T cellsFL cells Each dot = one patient

Green arrows indicate

healthy PBMC

average (N=6)

Page 46: Molecular & Cellular Immunology 3283 Cancer Immunity

TIL T Cell Signaling Stratifies Overall Survival in FL

Cancer Immunity - M&IM 3283 - IrishIrish et al., PNAS 2010

Page 47: Molecular & Cellular Immunology 3283 Cancer Immunity

Outline

Cancer Immunity - M&IM 3283 - Irish

Surveillance & immunoediting

Hematological malignancies

Cancer immunotherapy

Case study:

TLR9 KO lymphoma model

Page 48: Molecular & Cellular Immunology 3283 Cancer Immunity

Your PhD project focuses on understanding the role of innate immune

signaling in macrophages and dendritic cells in mouse models of lymphoma.

You have a mouse that is knock out for toll like receptor 9 (TLR9). TLR9 is

expressed in antigen presenting cells (APCs) and increases innate immune

function through NFkB and other signaling pathways that increase expression

of surface molecules, such as CD80, CD86, and CD40.

Your PI suggests a series of experiments where you will study whether CpG

synergizes with chemotherapy in a model of B cell lymphoma. In this model

you will subcutaneously inject a clonal lymphoma B cell line into an immune

competent mouse. Your PI would like you to treat with chemotherapy and CpG

in TLR9 wild type and knockout mice.

• What tumor immunity issues exist in this therapy model?

• What would be good controls?

• Should you generate any more reagents or tools?

Case Study: TLR9 KO Lymphoma Model

Cancer Immunity - M&IM 3283 - Irish

Page 49: Molecular & Cellular Immunology 3283 Cancer Immunity

Case Study: TLR9 KO Lymphoma Model

Cancer Immunity - M&IM 3283 - Irish

1. Treatment of established tumors vs. rejection of tumor engraftment. Establish the

tumor before treatment so that you are not just testing the ability of the immune

system to reject a tumor, which isn’t useful for human therapy.

2. Make sure there is “room to improve” on the gold standard. Treat with chemo +/-

CpG and make sure that chemo alone does not cure the tumor.

3. Artificial immunity vs. the cell line. A TLR9 knockout host may resist a TLR9

expressing tumor since this is a foreign antigen. It would be useful to generate a

TLR9 knockout tumor cell line so that mice +/- TLR9 will not different in their natural

response to the tumor.

4. Mechanism of action may not be clear. In this case the tumor and host both can

respond to the therapy (TLR9 is expressed in APCs, which include B cells, dendritic

cells, and monocytes). This can be an opportunity as well.

5. Systemic vs. local immune response. Create two tumors, one on each flank. Treat

one tumor locally with chemo + CpG and then assess the response at the flanking

tumor. Systemic immunity will clear the flanking tumor.