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Introduction to Medical Informatics Aslı YAZAĞAN Middle East Technical University Doctoral Student at Informatic Institute Medical Informatics Programme & RTEU Vocational School Teaching Assistant at Computer Technologies Department 31.03.2015 Tbilisi State Medical University Aslı Yazağan

Mathematics, Statistics and Medical Informatics

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Page 1: Mathematics, Statistics and Medical Informatics

Introduction to Medical Informatics

Aslı YAZAĞANMiddle East Technical University

Doctoral Student at Informatic Institute

Medical Informatics Programme &

RTEU Vocational School Teaching Assistant at

Computer Technologies Department

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 2: Mathematics, Statistics and Medical Informatics

Who I am

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Matematics @ HacettepeInformatics @ Pittsburgh

Medical Informatics Metu

Page 3: Mathematics, Statistics and Medical Informatics

OverviewStory of Mathematics and Statistics

Medical Informatics

Global Health Issues

Emerging Trends

The Future of Medicine

New Technologies in Medicine

Wearable & Portable Health Devices

3D Printing

Augmented Reality

Online Health Communities

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 4: Mathematics, Statistics and Medical Informatics

Chain Problem

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Here is the story

What do you think about this?

Page 5: Mathematics, Statistics and Medical Informatics

Chain Problem

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

What aboutthis?

Page 6: Mathematics, Statistics and Medical Informatics

Turbulance Theory

Newton (17.yy) vs. Laplace (18.yy)

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 7: Mathematics, Statistics and Medical Informatics

Math : Language of Nature

• Math create rules to define the whole universe.• Is it possible to apply mathematics’s principles on

social sciences such as biology, sociology, economic and medicine?

• Is it language for human nature?

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

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Dealing with uncertanity

• Human ~ Uncertanity, many variables..• Not possible to have exact result.• How to calculate the probability of a case occurs?

Statistics and Probability

• 16yy : researchers tries to deal with uncertanity.Kuantum Physics rely on uncertanity.

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 9: Mathematics, Statistics and Medical Informatics

Mathematics use statistics and probability to diffuse

social sciences.

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Social Sciences(biology,

sociology, economics medicine)

statistics

probability

Page 10: Mathematics, Statistics and Medical Informatics

Statistics• 17.yy - a salesclerk in London : John Graunt• Weekly Death Report from all regions > Live table

63 disease and death reasonsFirst time new born sex balanceAge distibution of people in the regionChild and old deaths and reasons

• Mathematics meet with Social Sciences…

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 11: Mathematics, Statistics and Medical Informatics

Statistics• If a person 60 years old what is the prob. of he lives

until 80?• Even papa used!

“According to table half of people die before 17 years old. So instead of complaining about life, we should think each year a gift for us given.” Edmont Halley

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 12: Mathematics, Statistics and Medical Informatics

Statistics • Social phenomenon has a reason and statistics can

be used to set rules for social regulation.• Founder of modern statistics: Belguim scientist

Lambert Adolphe-Jacques Quetelet

• People’s weight, height, limb lenght and also entellectual properties…

All human features has similar distibution.

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

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Statistics • Measurable features has a distribution depending a

mathematical function.

• But people income does not show a normal distribution??

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 14: Mathematics, Statistics and Medical Informatics

Probability• Gamblers..• Karl Peason

24.000 coin toss : 12.000 vs 12.012

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

“Looks like a chance but it obeys a rule”.

Page 15: Mathematics, Statistics and Medical Informatics

Probability and Genetics• A priest from Moravia : Mendel• Mathematicals foundation of Genetics• Experiments on peas

Similar to 2 coin toss experiment.

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 16: Mathematics, Statistics and Medical Informatics

Next Generation Sequencing• Geneticists tries to predicts future

generation characteristics analyzing DNA using statisicical methods.

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 17: Mathematics, Statistics and Medical Informatics

Big Data

• Probability and Statistics are meaningfull if

there is a BIG AMOUNT OF DATA

Informatics

INTRODUCTION TO MEDICAL INFORMATICS

31.03.2015 Tbilisi State Medical University Aslı Yazağan

Page 18: Mathematics, Statistics and Medical Informatics

The world is getting old… Demand is increasing…

The life expectancy of human is increasing Chronic diseases is increasing Health Personnel need is increasing Health consciousness is improving

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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+Hospitals need

Qualified Health workers needIncreasing Health Expenses and gap between rich & poor

Insufficient education of public

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Emerging Trends in Medical Field

Genomic Medicine

Standardized Electronic Health Records

Remote Healthcare and Diagnosis

Aggregated Public Health Data

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Page 24: Mathematics, Statistics and Medical Informatics

Genomic Medicine

• Advances in genomic medicine envision personalized medicine that uses individuals’ genome information to prevent, diagnose and treat diseases.

Challenges: storing, sharing and analyzing the genomic data.

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Page 25: Mathematics, Statistics and Medical Informatics

Electronic Health Records

• Electronic Health Record (EHR) is a longitutudinal electronic record of patient health information generated by one or more encounters in any care delivery setting.

Challenges: Storing, sharing and analyzing it securely.

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Page 26: Mathematics, Statistics and Medical Informatics

Remote Healthcare and Diagnosis

• Solution for the people that are not able to get good health services in rural areas.

• Health Professionals can collaborate to give the best decision for patients.

• Patients can be monitored to get real-time health information using a mobile device and an alarm system can be triggered when an abnormal situation is detected.

Challenges: Storing, sharing and analyzing it securely. 31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Aggregated Public Health Data

• Large data obtained by digital health records that does not have information identifies any individual patients.

Challenges: Analyzing this data can produce significant outcomes for public assessments, public education and for commercial purposes.

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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What are the NEEDs for Future?

Clinicians need to; Be more efficientMigrate away from paper based-recordsReduce Medication errorsHave educational and patient related information at their

fingerprints.

More tools for clinicians; Internet High speed computers Voice recognition Wireless and mobile technology

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Page 29: Mathematics, Statistics and Medical Informatics

A Geek DoctorBertalan Meskó, MD, PhD

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Preventive Medicine

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Medicine + Mathematics + Engineering

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Medicine + Mathematics + Engineering

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Page 34: Mathematics, Statistics and Medical Informatics

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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What could be a Solution?

•Application of computers, communications and information technology and systems to all field of medicine – medical care, medical education and medical research. •Use scientific field that deals with big data.•Understanding, skills and tools that enable the sharing and use of information to deliver healthcare and promote health

Doctor 2.0

•Bioinformatics Analysis of biological information using computers and statistical techniques; the science of developing and utilizing computer databases and algorithms to accelerate and enhance biological research.

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Medicine + Mathematics + Engineering + Informatics

Medicine : grounds us in clinically relevent questionsMathematics : news way to analyze and taylor it to specific disease

Engineering : put the pieces together Informatics: helps to deal with big data

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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Medical Informatics

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Medicine is going to become an information science.Dr. Leroy Hood (Genomics pioneer)

Page 38: Mathematics, Statistics and Medical Informatics

Wearable Health Devices

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Paramedics using the handheld Stroke Angel system in the field.

Ambulances equipped with PDA-based checklists help guide the paramedics’ examination of patient status; the PDA transfers examination results and patient data wirelessly to an appropriate hospital for pre-registration and check-in.

Page 39: Mathematics, Statistics and Medical Informatics

Wearable Health Devices

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

A belt that can monitor a developing baby's heartbeat, sleep and motion could allow doctors to monitor high-risk pregnancies without hospitalising mothers

Page 40: Mathematics, Statistics and Medical Informatics

Wearable Health Devices

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

The ActiBelt system: Multiple MS patients wore ActiBelts for seven days at home so that researchers could record their movements and measure their daily activity. It can detect movements related to running, walking, sitting, standing up, lying down.

Page 41: Mathematics, Statistics and Medical Informatics

3D Printing

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

In 2013, French Professor Alain Carpentier engineered the first self-regulating artificial heart, using biomaterials and electronic sensors. Electronic sensors and microprocessors could monitor blood pressure and flow in real time – instantly adjusting the pulse rate.

Page 42: Mathematics, Statistics and Medical Informatics

Virtual & Augmented Reality

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

https://youtu.be/zJiCt_VYxPY?list=UU8vwN4Sju7ER6KZzDADBKBQ

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Online Health Communities

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

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31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Thank you!

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31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

Turkey Case

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Medical Informatics Education in Turkey

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

•Computer education class first in 1984 in Medical faculties. •Most of Medical Faculties have Computer class.•Medical Informatician is

a Biostatician a lecturer from Public Health department?a lecturer from Medical Education department?

•Course Contents:ICT (Information Communication Technology)

Computer Hardware - Office ProgramsMedical Informatics

HIS, EHR, Health Standards, Databases, Medical Literature and Internet, etc.

https://youtu.be/iTAKyezQggk

Page 47: Mathematics, Statistics and Medical Informatics

Medical Informatics SubFields

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

•Health Information Systems•Decision Support Systems•Bioinformatics

Electronic Health RecordsImage Processing Signal AnalysisNursing Information SystemsTeleMedicineHealth Standards(HL7 ,DICOM)Augmented Reality3-D Printing Wearable Health devicesMedical Informatics Education

Page 48: Mathematics, Statistics and Medical Informatics

Decision Support Systems

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

•Decision making process requires having all relevant data displayed in a meaningful setting.

•Medical Images AnalysisAbnormally detection from the medical images Image segmentation and registration

Page 49: Mathematics, Statistics and Medical Informatics

Bioinformatics

31.03.2015 Tbilisi State Medical University Aslı Yazağan

INTRODUCTION TO MEDICAL INFORMATICS

•Bioinformatic and biomedical researchers need resource-intensive applications to store large data sets, catalogs and archives. •Image analysis, data mining, protein folding and gene sequencing are all important tasks for biomedical researches