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We are now unlocking the secrets of health at a molecular level – which includes not only why some people get diseases, but also how to prevent or cure them. However, as Osler points out, knowing this information is only valuable in the context of making it available for the right patient at the right time. This presentation provides a basic introduction to genomic or personalized medicine, and discusses how this information can and should be integrated into our electronic medical record systems. These slides were originally presented at the HIMSS Annual Conference in February of 2007.
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Enabling the Future of Care Delivery: IT-Driven, Molecular Medicine
HIMSS Annual Conference
February 27, 2007
Lyle Berkowitz, MD
Keith Strier, JD, PAHM
“To wrest from nature the secrets which have perplexed philosophers in all ages, to track to their sources the causes of disease, to
correlate the vast stores of knowledge, that they may be quickly available for the
prevention and cure of disease — these are our ambitions.”
—Sir William Osler (1849 – 1919)
Our Ambitions
Agenda
Background
The Great Integration
Implications and Future Thinking
The PromiseImagine when doctors can…
Predict Disease pre-symptomatically with simple testing
Prevent Disease by identifying risks, early interventions
Diagnose Conditions less invasively, more accurately
Select Drugs that maximize benefits and minimize risks
Calibrate Treatments to heighten efficacy and recovery
Treat/Cure Disease using our own genes
Dis
ease
Bur
den
Time
Cos
t
1/re
vers
ibili
ty
Typical Current
Intervention
Earliest Clinical
Detection
Earliest Molecular Detection
Initiating Events
Baseline Risk
Decision Support Tools:
Baseline Risk Preclinical Progression
Disease Initiation and Progression
Assess Risk Refine Assessment
Predict
Diagnose
Track Progression
Predict Events
Inform Therapeutics
Sources of New Biomarkers:
Stable Genomics: Single Nucleotide Polymorphisms Haplotype Mapping Gene Sequencing
Dynamic Genomics: Gene ExpressionProteomics Metabolomics Molecular Imaging
Therapeutic Decision Support
Sou
rce:
“P
erso
naliz
ed M
edic
ine:
Cur
rent
and
Fut
ure
Per
spec
tives
,” P
atric
ia
Dev
erka
, MD
, Duk
e U
nive
rsity
, Ins
titut
e fo
r G
enom
e S
cien
ces
and
Pol
icy;
and
R
ick
J. C
arls
on, J
D, U
nive
rsity
of W
ashi
ngto
n
Changing Paradigm of Care
Real World Examples
Stable Genomics (Inherited Genes)– BRCA 1 & 2 predictor of breast and ovarian cancer risks– LDLR and APOB predictor of developing early coronary artery disease– MODY 1-6 predictor of MODY diabetes; subtypes affect treatment choice– CYP2D6/C19 Main cytochrome P450 genes that affects drug metabolism dosing – CYP2C9/VKORC1 variants in these cP450 genes affect warfarin metabolism– TPMT guides adjustment of Purinethol dosing in Acute Leukemia patients
Dynamic Genomics (Gene Expression, Biomarkers…)– Estrogen Receptor predicts response to Tamoxifen in breast cancer– HER-2 Receptor predicts response to Herceptin in breast cancer– PSA predicts risk of prostate cancer– Cholesterol predicts risk of heart disease and strokes– HIV Genotyping to guide selection of therapy– PET Scans to diagnose and help manage treatment options for various cancers
Evolving Applications
Open Source Tools/Networks
Understand
Apply
The Great Integration
Genetic Banking
Clinical Collaboration
NUGene Project Understanding Genomics
NUGene: Data Flow & Privacy
NOTISNUgene
DatabasePhenotypic
Data Warehouse
Coded Data
Phenotypic Engine
Encryption
Decryption
De-identification Process
Medical Record
Participant Enrollment Materials
Patient Identifiers
Clinical Proteomics Initiative Understanding Proteomics
Background– Joint initiative between the NCI and the FDA – Correlate protein and gene expression patterns
Early detection and cancer screening Establish therapeutic response endpoints Monitor drug toxicity during treatment
Ovarian Cancer Project– Phase 1: Identify diagnostic patterns– Phase 2: Confirm diagnostic ability– Phase 3: Test in real world
Correlagen Applying Genomics in the Real World
Genes That Matter™ Integrated Results Reporting Examples
– Maturity-Onset Diabetes of the Young (MODY)– Early-Onset Coronary Heart Disease– Severe Combined Immunodeficiency (SCID)
Case Scenario #1
3yo male Acute lymphoblastic leukemia Being treating with mercaptopurine
How do you currently manage this scenario?
How will you manage this in the world of molecular medicine integrated with EMRs?
Pharmacogenomic Alert
Pharmacogenomic AlertThis patient has a TMPT gene defect which indicates a high
sensitivity to standard doses of mercaptopurine.
[] Cancel Drug Order
[] Lower the standard dose (75mg/m2) by 85% to a modified dose (11.25 mg/m2)
[] Ignore this Alert
Case Scenario #2
32yo Female New onset diabetes (non-ketotic) Non-obese
How do you currently manage this scenario?
How will you manage this in the world of molecular medicine integrated with EMRs?
Diagnostic Alert
Dx AlertThis patient fits the profile for MODY. Consider
checking for MODY genetics
[] Order MODY Genetic Screen
[] Ignore Alert
[] Learn more about MODY
Treatment Alert
Treatment AlertBased on known genomic data and phenotype
expression in this patient, the best treatment for their Type 1 MODY diabetes is to start with a sulfanurea.
[] Change Order to a Sulfanurea
[] Ignore Alert
ImplicationsThings to start thinking about
Diagnose
Treat
PredictCDS
PersonnelStorage
Impact on Other Players
The Future
Technology Advancements– The $1000 Complete Genome– BioMarker Testing: POC/Continuous– Superior Molecular Imaging
Ethical, Financial and Regulatory Issues– Who should get these tests– Who should pay for these tests– How should this data be stored– How will this data be used
Better,
Faster,
Cheaper
Resources
The Human Genome Project: www.genome.gov The NUGene Project: www.NUGene.org Clinical Proteomics Project: http://proteomics.cancer.gov The FDA and Genomics: www.fda.gov/cder/genomics The CDC and Genomics: www.cdc.gov/genomics/default.htm NIH & Pharmacogenetics: www.nigms.nih.gov/Initiatives/PGRN Non-Profit Organizations
– http://bioitalliance.org – http://www.personalizedmedicinecoalition.org
News and Updates– http://www.ageofpersonalizedmedicine.org – http://www.genomenewsnetwork.org/
Thank You