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Session 4.7
Unit 4: Development, Plants and the EnvironmentTopic 6: Infections, immunity and forensics
TranscriptionIntroduction
Structure of a geneTranscription process
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Session 4.7
Unit 4: Development, Plants and the EnvironmentTopic 6: Infections, immunity and forensics
TranscriptionIntroduction
Structure of a geneTranscription process
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
DNA ReplicationDNA content doubles
TranscriptionSynthesis of RNAA region of DNA is used to make one RNA
TranslationSynthesis of proteinOne mRNA is used to make one protein
The Central Dogma of Molecular Biology
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Introduction
Structure of RNA
Sugar-phosphate backbone
Adenine (A)
Cytosine (C)
Phosphate
Guanine (G)
Ribose
5’ end
Nitrogen bases
3’ end
Uracil (U)
One RNA strand
“single-stranded RNA”
OH
OH
OH
OH
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Introduction
mRNA = Messenger RNAUsed as a template for protein synthesisIntermediate between DNA and proteinBrings the “message” written in DNA
Message = instructions for synthesizing the protein
tRNA = Transfer RNAUsed for protein synthesis
Brings amino acids
rRNA = Ribosomal RNAPart of Ribosomes
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Introduction
mRNAs, tRNAs and rRNAs are used in translation
There are many kinds of RNA
For expression of genes and beyond
Regulation: siRNA, microRNA, snRNA Coding RNA: messenger RNA=mRNA Non-coding RNA: Tools in translation tRNA rRNA
Transcription takes place in the nucleusRNA is exported from the nucleus into the cytoplasmTranslation of mRNA takes place in the cytoplasm
TRANSCRIPTION
TRANSLATION
DNA
mRNARibosome
Protein
There is no nucleus,Transcription AND translation take place in the cytoplasm
Prokaryotes
DNA
Pre-mRNA
Nuclearenvelope
mRNA
TRANSLATION
TRANSCRIPTION
MATURATION
Ribosome
Polypeptide
Eukaryotes
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Introduction
Session 4.7
Unit 4: Development, Plants and the EnvironmentTopic 6: Infections, immunity and forensics
TranscriptionIntroduction
Structure of a geneTranscription process
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Structure of a gene
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Contains the bases that encode the amino acids of
the protein
Inactive/ActiveActivated only if specific
transcription factors bind these base pairs
Contains the base pairs that make transcription
cease
"Wait my signal before you start reading!"
"read the information!" "Stop reading!"
Session 4.7
Unit 4: Development, Plants and the EnvironmentTopic 6: Infections, immunity and forensics
TranscriptionIntroduction
Structure of a geneTranscription process
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
DNA
Gene 1
Gene 2
Gene 3
DNA strand(template)
3'
TRANSCRIPTION
Codon
RNA
TRADUCTION
3'5'
5'
Several RNA:- ribosomal- transfer- small nuclear- micro- messenger
Complementary
DNA RNA
A U T A G C C G
Complementarity
Overall direction
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Transcription is the use of a region of one strand of the DNA double helix as a template to produce a molecule of RNA
This strand is called the non-coding strand/antisense strandOther strand = coding strand/sense strand/non-template strand
Enzyme: RNA Polymerase
RNA Polymerase adds AMP, CMP, GMP and UMP to a new RNA strand
AMP = Adenosine monophosphate
From the 5’P to the 3’OH end of the new RNA strandFrom the 3’OH to the 5’P end of the template DNA strand
The RNA strand is complementary to its DNA template
DNA RNATranscription
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Non-coding strandAntisense strandTemplate strand
5’a 3’
Coding strandSense strandNon-template strand
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
DNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5’aa 3’
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
DNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5’aau 3’
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
DNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5’aauguag 3’
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
DNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5’aauguag 3’
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Direction of transcription5’ to 3’ of RNA3’ to 5’ of coding/sense/non-template strand5’ to 3’ of non-coding/antisense/template strand
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
DNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
DNA RNA
2. Transcribe the DNA coding strand only to RNA from 5’ to 3’ of the RNA
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
1 Denaturation 5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5' 3'aauguaguaguaaacuggugaaaugcaagguauuuauugcuaaggaagaugcuggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
RNA is almost the same as the coding/sense/non-template strand (U instead of T)RNA is complementary to the non-coding/antisense/template strand (CG GC / TA AU
Manual Transcription of DNA to RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggagattacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Template DNA
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
Result of DNA Replication
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
Result of transcription
5' 3'aatgtagtagtaaactggtgaaatgcaaggtatttattgctaaggaagatgctggaga
ttacatcatcatttgaccactttacgttccataaataacgattcgttctacgacctct3’ 5’
5' 3'aauguaguaguaaacuggugaaaugcaagguauuuauugcuaaggaagaugcuggaga
Comparison of DNA Replication and Transcription
Old DNANew DNA
RNA
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-coding strandAntisense strandTemplate strand
Coding strandSense strandNon-template strand
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Transcription process
Non-template / Coding Template / Non-coding
Not individual tRNAs hereRather… if you could put all the anticodons in tandem
Session 4.7
Unit 4: Development, Plants and the EnvironmentTopic 6: Infections, immunity and forensics
TranscriptionIntroduction
Structure of a geneTranscription process
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
“Splicing” = joining two linear pieces together
Most eukaryotic genes are discontinuous The coding region of the gene is composed of two elements
- Exons = used in final/mature mRNA - Introns = NOT present in final/mature mRNA
But both exons and introns are present in the initial/immature mRNA
Introns will be “eliminated” / spliced outExons will be spliced together
Mature mRNA is composed of exons only
Only exons contains the codons
Only exons are coding for proteins This modification of pre-mRNA into mRNA happens after transcription
“Post-transcriptional modification”
Splicing of exons
A2 Edexcel Biology Xavier DANIEL, Ph.D.
Alternative splicing
Human body can make antibodies that are- embedded in the membrane of Lymphocyte sB- secreted by lymphocytes B
Two forms of the same proteins making up antibodies
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