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Halobacterium sp. NRC-1 NP_045984. Halobacterium sp. NRC-1 NP_046115. Halobacterium sp. NRC-1 NP_395927. Halobacterium sp. NRC-1 NP_395611. Halobacterium salinarum R1 YP_001690410. Halobacterium salinarum R1 YP_001690911. Saccharopolyspora erythraea NRRL 2338 YP_001105158. - PowerPoint PPT Presentation
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Halobacterium sp. NRC-1 NP_045984Halobacterium sp. NRC-1 NP_046115
Halobacterium sp. NRC-1 NP_395927
Halobacterium sp. NRC-1 NP_395611
Halobacterium salinarum R1 YP_001690410
Halobacterium salinarum R1 YP_001690911
Saccharopolyspora erythraea NRRL 2338 YP_001105158
Nocardia farcinica IFM 10152 YP_117796
Mycobacterium smegmatis str. MC2 155 YP_889839Frankia sp. EAN1pec YP_001510823
Frankia sp. CcI3 YP_479373
Frankia alni ACN14a YP_710879
Herpetosiphon aurantiacus ATCC 23779 YP_001545011
Symbiobacterium thermophilum IAM 14863 YP_075521
Gramella forsetii KT0803 YP_861002
Anaeromyxobacter dehalogenans 2CP-C YP_464151
Anaeromyxobacter sp. Fw109-5 YP_001378174
Myxococcus xanthus DK 1622 YP_635027
Sorangium cellulosum So ce 56 YP_001613076
Bacillus subtilis subsp. subtilis str. 168 NP_390949
Bacillus amyloliquefaciens FZB42 YP_001422361
Bacillus pumilus SAFR-032 YP_001487928
Bacillus licheniformis ATCC 14580 YP_080351
Bacillus licheniformis ATCC 14580 YP_092768
Bacillus halodurans C-125 NP_241744
Bacillus clausii KSM-K16 YP_174786
Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376946
Bacillus cereus ATCC 14579 NP_834887
Bacillus weihenstephanensis KBAB4 YP_001647789
Bacillus thuringiensis serovar konkukian str. 97-27 YP_039214
Bacillus anthracis str. Ames NP_847628
Bacillus thuringiensis str. Al Hakam YP_897414
Bacillus anthracis str. Sterne YP_031312
Bacillus anthracis str. Ames Ancestor YP_022123
Bacillus cereus E33L YP_086487
Bacillus cereus ATCC 10987 NP_981630
Picrophilus torridus DSM 9790 YP_023387
Picrophilus torridus DSM 9790 YP_023642
Thermoplasma volcanium GSS1 NP_110602
Thermoplasma acidophilum DSM 1728 NP_394935
Thermoplasma acidophilum DSM 1728 NP_394452
Thermoplasma volcanium GSS1 NP_111251
Exiguobacterium sibiricum 255-15 YP_001814487
Lysinibacillus sphaericus C3-41 YP_001695995Bacillus halodurans C-125 NP_244843
Oceanobacillus iheyensis HTE831 NP_691971
Geobacillus kaustophilus HTA426 YP_147937
Geobacillus kaustophilus HTA426 YP_146457
Geobacillus thermodenitrificans NG80-2 YP_001124645
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 YP_301795
Staphylococcus epidermidis ATCC 12228 NP_764339
Staphylococcus epidermidis RP62A YP_188257Staphylococcus haemolyticus JCSC1435 YP_253784
Staphylococcus aureus subsp. aureus MRSA252 YP_040473
Staphylococcus aureus subsp. aureus JH1 YP_001316309
Staphylococcus aureus subsp. aureus str. Newman YP_001331986
Staphylococcus aureus subsp. aureus Mu3 YP_001441668
Staphylococcus aureus subsp. aureus USA300 YP_493684
Staphylococcus aureus subsp. aureus N315 NP_374205
Staphylococcus aureus subsp. aureus JH9 YP_001246522
Staphylococcus aureus subsp. aureus USA300 TCH1516 YP_001574927
Staphylococcus aureus subsp. aureus NCTC 8325 YP_499580
Staphylococcus aureus subsp. aureus MSSA476 YP_043145
Staphylococcus aureus subsp. aureus COL YP_185958
Staphylococcus aureus subsp. aureus Mu50 NP_371610
Staphylococcus aureus subsp. aureus MW2 NP_645785
Staphylococcus aureus RF122 YP_416437
Burkholderia vietnamiensis G4 YP_001116207
Syntrophobacter fumaroxidans MPOB YP_847118
Syntrophobacter fumaroxidans MPOB YP_847160
Anabaena variabilis ATCC 29413 YP_320073
Anabaena variabilis ATCC 29413 YP_324548
Synechococcus elongatus PCC 6301 YP_173035
Synechococcus elongatus PCC 7942 YP_400784
Gloeobacter violaceus PCC 7421 NP_924143
Cyanothece sp. ATCC 51142 YP_001804829
Anabaena variabilis ATCC 29413 YP_320076
Nostoc sp. PCC 7120 NP_488064
Anabaena variabilis ATCC 29413 YP_322192
Acaryochloris marina MBIC11017 YP_001520281
Synechocystis sp. PCC 6803 NP_440505
Thermosynechococcus elongatus BP-1 NP_682392
Synechococcus sp. JA-3-3Ab YP_475181
Synechococcus sp. JA-2-3Ba2-13 YP_477446
Bradyrhizobium japonicum USDA 110 NP_766923
Burkholderia multivorans ATCC 17616 YP_001585770
Azorhizobium caulinodans ORS 571 YP_001524270Methylobacterium radiotolerans JCM 2831 YP_001757504
Hahella chejuensis KCTC 2396 YP_432017
Marinomonas sp. MWYL1 YP_001342988
Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677725
Francisella tularensis subsp. novicida U112 YP_899232
Francisella tularensis subsp. holarctica FTA YP_001429301
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_094253
Legionella pneumophila str. Paris YP_122602
Legionella pneumophila str. Corby YP_001249616
Legionella pneumophila str. Lens YP_125621
Rhodopseudomonas palustris HaA2 YP_483827
Parvibaculum lavamentivorans DS-1 YP_001411876
Alcanivorax borkumensis SK2 YP_694142
Colwellia psychrerythraea 34H YP_270499
Saccharophagus degradans 2-40 YP_526702
Vibrio cholerae O1 biovar eltor str. N16961 NP_231211
Vibrio cholerae O395 YP_001217121Methylibium petroleiphilum PM1 YP_001021761
Bradyrhizobium japonicum USDA 110 NP_770368
Bordetella petrii DSM 12804 YP_001629498
Bordetella parapertussis 12822 NP_885736
Bordetella bronchiseptica RB50 NP_890546
Bordetella pertussis Tohama I NP_881775
Chromobacterium violaceum ATCC 12472 NP_903328
Mesorhizobium loti MAFF303099 NP_105373
Jannaschia sp. CCS1 YP_508678
Dinoroseobacter shibae DFL 12 YP_001534022
Azoarcus sp. BH72 YP_933275
Ralstonia solanacearum GMI1000 NP_522803
Ralstonia metallidurans CH34 YP_587360
Polaromonas sp. JS666 YP_550908
Polaromonas naphthalenivorans CJ2 YP_980736
Halorhodospira halophila SL1 YP_001003985
Alkalilimnicola ehrlichei MLHE-1 YP_742877
Chromohalobacter salexigens DSM 3043 YP_574051
Marinobacter aquaeolei VT8 YP_958735
Mesorhizobium sp. BNC1 YP_676598
Xanthobacter autotrophicus Py2 YP_001416174
Ralstonia solanacearum GMI1000 NP_522768
Burkholderia vietnamiensis G4 YP_001115027
Burkholderia multivorans ATCC 17616 YP_001585473
Burkholderia pseudomallei 668 YP_001062961
Burkholderia pseudomallei 1106a YP_001075908
Burkholderia pseudomallei K96243 YP_111388
Methylobacterium extorquens PA1 YP_001639446
Methylobacterium sp. 4-46 YP_001768208
Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638161
Xanthomonas campestris pv. campestris str. 8004 YP_242389
Xanthomonas axonopodis pv. citri str. 306 NP_643292
Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364860
Xanthomonas oryzae pv. oryzae MAFF 311018 YP_450200
Xanthomonas oryzae pv. oryzae KACC10331 YP_199912Xanthomonas campestris pv. campestris str. ATCC 33913 NP_639037
Xanthomonas campestris pv. campestris str. 8004 YP_244822
Xanthomonas axonopodis pv. citri str. 306 NP_644042
Xanthomonas campestris pv. vesicatoria str. 85-10 YP_365585
Xanthomonas oryzae pv. oryzae KACC10331 YP_199278
Xanthomonas oryzae pv. oryzae MAFF 311018 YP_449618
Psychrobacter arcticus 273-4 YP_264797
Psychrobacter cryohalolentis K5 YP_580955Wolbachia endosymbiont of Drosophila melanogaster NP_966497
Rickettsia bellii RML369-C YP_537689
Rickettsia bellii OSU 85-389 YP_001496000
Rickettsia canadensis str. McKiel YP_001491977
Rickettsia felis URRWXCal2 YP_246349
Rickettsia akari str. Hartford YP_001493141
Rickettsia prowazekii str. Madrid E NP_220602
Rickettsia typhi str. Wilmington YP_067171
Rickettsia massiliae MTU5 YP_001499104
Rickettsia conorii str. Malish 7 NP_359925
Rickettsia rickettsii str. Sheila Smith YP_001494408
Rickettsia rickettsii str. Iowa YP_001649653
Idiomarina loihiensis L2TR YP_154434
Polynucleobacter sp. QLW-P1DMWA-1 YP_001156393
Granulibacter bethesdensis CGDNIH1 YP_743957
Zymomonas mobilis subsp. mobilis ZM4 YP_163306
Gluconobacter oxydans 621H YP_190717
Acidiphilium cryptum JF-5 YP_001235159
Enterobacter sakazakii ATCC BAA-894 YP_001439012
Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638010
Xanthomonas campestris pv. campestris str. 8004 YP_242542
Nitrobacter hamburgensis X14 YP_571560
Methylobacterium extorquens PA1 YP_001641277
Methylobacterium radiotolerans JCM 2831 YP_001752902
Mesorhizobium sp. BNC1 YP_674974
Rhodospirillum rubrum ATCC 11170 YP_425651
Bradyrhizobium sp. ORS278 YP_001208645
Bradyrhizobium sp. BTAi1 YP_001236881
Rhodopseudomonas palustris BisB18 YP_529990
Rhodopseudomonas palustris BisA53 YP_779478
Rhodopseudomonas palustris CGA009 NP_950127
Rhodopseudomonas palustris HaA2 YP_488264
Rhodopseudomonas palustris BisB5 YP_571496
Methylobacterium sp. 4-46 YP_001771100
Methylobacterium radiotolerans JCM 2831 YP_001757570Paracoccus denitrificans PD1222 YP_917772
Sphingomonas wittichii RW1 YP_001260922
Novosphingobium aromaticivorans DSM 12444 YP_496304
Sinorhizobium meliloti 1021 NP_384665
Sinorhizobium medicae WSM419 YP_001325865
Psychromonas ingrahamii 37 YP_943166
Roseobacter denitrificans OCh 114 YP_681157
Rhodobacter sphaeroides ATCC 17025 YP_001170018
Rhodobacter sphaeroides 2.4.1 YP_354730
Rhodobacter sphaeroides ATCC 17029 YP_001045802
Acinetobacter sp. ADP1 YP_046412
Acinetobacter baumannii ATCC 17978 YP_001084464
Acinetobacter baumannii AYE YP_001714068
Burkholderia xenovorans LB400 YP_557210
Burkholderia multivorans ATCC 17616 YP_001585362
Burkholderia ambifaria AMMD YP_777566
Burkholderia ambifaria MC40-6 YP_001816424
Burkholderia sp. 383 YP_366247
Burkholderia sp. 383 YP_366658Burkholderia cenocepacia MC0-3 YP_001774662
Burkholderia cenocepacia AU 1054 YP_621301
Burkholderia cenocepacia HI2424 YP_840030
Burkholderia vietnamiensis G4 YP_001115242
Burkholderia xenovorans LB400 YP_553508
Burkholderia vietnamiensis G4 YP_001116102
Burkholderia multivorans ATCC 17616 YP_001583283
Burkholderia sp. 383 YP_370935
Burkholderia ambifaria AMMD YP_776701
Burkholderia ambifaria MC40-6 YP_001812025
Burkholderia cenocepacia AU 1054 YP_625229
Burkholderia cenocepacia HI2424 YP_839104
Burkholderia cenocepacia MC0-3 YP_001778411
Burkholderia thailandensis E264 YP_440336
Burkholderia pseudomallei 1710b YP_336927
Burkholderia mallei NCTC 10247 YP_001079272
Burkholderia mallei NCTC 10229 YP_001024930
Burkholderia pseudomallei 668 YP_001061434
Burkholderia mallei SAVP1 YP_990436
Burkholderia pseudomallei 1106a YP_001074378
Burkholderia pseudomallei K96243 YP_110254
Burkholderia mallei ATCC 23344 YP_106386
Marinomonas sp. MWYL1 YP_001341997
Ralstonia eutropha JMP134 YP_298301Ralstonia eutropha H16 YP_840979
Methylobacillus flagellatus KT YP_545052
Methylobacillus flagellatus KT YP_545196
Bordetella parapertussis 12822 NP_883344
Bordetella bronchiseptica RB50 NP_887784
Bordetella petrii DSM 12804 YP_001632445
Azoarcus sp. EbN1 YP_159652
Ralstonia metallidurans CH34 YP_587086
Ralstonia eutropha JMP134 YP_298481
Ralstonia eutropha H16 YP_840698
Pseudomonas putida GB-1 YP_001669500
Gluconacetobacter diazotrophicus PAl 5 YP_001600819
Azorhizobium caulinodans ORS 571 YP_001526675
Pseudomonas aeruginosa PA7 YP_001348478
Pseudomonas aeruginosa PA7 YP_001346562
Pseudomonas aeruginosa PAO1 NP_252619
Pseudomonas aeruginosa UCBPP-PA14 YP_789187Pseudomonas entomophila L48 YP_608020
Pseudomonas fluorescens Pf-5 YP_260833
Pseudomonas fluorescens PfO-1 YP_349115
Pseudomonas stutzeri A1501 YP_001172323
Pseudomonas mendocina ymP_YP_001186246
Pseudomonas fluorescens Pf-5 YP_262432Pseudomonas syringae pv. phaseolicola 1448A YP_276457
Pseudomonas syringae pv. syringae B728a YP_237350
Pseudomonas syringae pv. tomato str. DC3000 NP_794399
Pseudomonas fluorescens PfO-1 YP_350621
Pseudomonas entomophila L48 YP_610218
Pseudomonas putida W619 YP_001747661
Pseudomonas putida KT2440 NP_746760
Pseudomonas putida F1 YP_001269817
Pseudomonas putida GB-1 YP_001670867
Photorhabdus luminescens subsp. laumondii TTO1 NP_929304
Vibrio parahaemolyticus RIMD 2210633 NP_800647
Shewanella sp. MR-7 YP_737020
Shewanella sp. ANA-3 YP_868569
Shewanella baltica OS155 YP_001049308
Shewanella baltica OS185 YP_001367639
Shewanella baltica OS195 YP_001555995
Shewanella sp. W3-18-1 YP_964615
Shewanella putrefaciens CN-32 YP_001182458
Yersinia enterocolitica subsp. enterocolitica 8081 YP_001006678
Serratia proteamaculans 568 YP_001479088
Citrobacter koseri ATCC BAA-895 YP_001452803
Enterobacter sp. 638 YP_001176857
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001335591
Enterobacter sakazakii ATCC BAA-894 YP_001438025
Enterobacter sp. 638 YP_001177845
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334816
Salmonella enterica subsp. arizonae serovar 62 YP_001571562
Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_454955
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_806232Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215388
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001589431
Salmonella typhimurium LT2 NP_459355
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151558
Flavobacterium johnsoniae UW101 YP_001197197
Acidobacteria bacterium Ellin345 YP_592327
Solibacter usitatus Ellin6076 YP_827888
Anaeromyxobacter sp. Fw109-5 YP_001378843
Rhodopirellula baltica SH 1 NP_869127
Candidatus Protochlamydia amoebophila UWE25 YP_008629
Chlamydia muridarum Nigg NP_296660
Chlamydia trachomatis D UW-3 CX NP_219515
Chlamydia trachomatis A HAR-13 YP_327811
Chlamydia trachomatis 434 Bu YP_001654352
Chlamydia trachomatis L2b UCH-1 proctitis YP_001653364
Chlamydophila abortus S26 3 YP_220039
Chlamydophila caviae GPIC NP_829534
Chlamydophila felis Fe C-56 YP_515258
Chlamydophila pneumoniae AR39 NP_445214
Chlamydophila pneumoniae TW-183 NP_876378
Chlamydophila pneumoniae CWL029 NP_224310
Chlamydophila pneumoniae J138 NP_300162
Anaeromyxobacter dehalogenans 2CP-C YP_466933
Heliobacterium modesticaldum Ice1 YP_001680379
Carboxydothermus hydrogenoformans Z-2901 YP_361239
Aquifex aeolicus VF5 NP_213934
Syntrophus aciditrophicus SB YP_461912
Pelobacter carbinolicus DSM 2380 YP_358496
Geobacter sulfurreducens PCA NP_952691
Geobacter metallireducens GS-15 YP_384884
Geobacter uraniireducens Rf4 YP_001230923
Pelobacter propionicus DSM 2379 YP_900848
Syntrophobacter fumaroxidans MPOB YP_844474
Desulfococcus oleovorans Hxd3 YP_001530529
Lawsonia intracellularis PHE MN1-00 YP_594652
Desulfovibrio desulfuricans G20 YP_389693
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough YP_012481
Desulfovibrio vulgaris subsp. vulgaris DP4 YP_965569
Symbiobacterium thermophilum IAM 14863 YP_074471
Methanosarcina acetivorans C2A NP_615957
Methanosarcina barkeri str. Fusaro YP_303687
Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376669
Bacillus thuringiensis serovar konkukian str. 97-27 YP_038840Bacillus cereus ATCC 10987 NP_981242
Bacillus cereus E33L YP_086122
Bacillus cereus ATCC 14579 NP_834494
Bacillus weihenstephanensis KBAB4 YP_001647411
Bacillus anthracis str. Ames NP_847241
Bacillus anthracis str. Sterne YP_030934
Bacillus anthracis str. Ames Ancestor YP_021698
Bacillus thuringiensis str. Al Hakam YP_897070
Moorella thermoacetica ATCC 39073 YP_430930
Desulfitobacterium hafniense Y51 YP_520289
Desulfotomaculum reducens MI-1 YP_001112992
Chlorobium tepidum TLS NP_662697
Chlorobium phaeobacteroides DSM 266 YP_911179
Pelodictyon luteolum DSM 273 YP_374406
Prosthecochloris vibrioformis DSM 265 YP_001130055
Listeria welshimeri serovar 6b str. SLCC5334 YP_850867
Listeria monocytogenes EGD-e NP_466240
Listeria innocua Clip11262 NP_472194
Listeria monocytogenes str. 4b F2365 YP_015286
Bacillus licheniformis ATCC 14580 YP_081211
Bacillus licheniformis ATCC 14580 YP_093640
Bacillus pumilus SAFR-032 YP_001488727
Bacillus subtilis subsp. subtilis str. 168 NP_391755
Bacillus amyloliquefaciens FZB42 YP_001423161
Bacillus weihenstephanensis KBAB4 YP_001644670
Bacillus cereus ATCC 14579 NP_831708
Bacillus cereus ATCC 10987 NP_978337
Bacillus thuringiensis str. Al Hakam YP_894553
Bacillus thuringiensis serovar konkukian str. 97-27 YP_036109
Bacillus cereus E33L YP_083355
Bacillus anthracis str. Sterne YP_028067
Bacillus anthracis str. Ames NP_844352
Bacillus anthracis str. Ames Ancestor YP_018587
Lactobacillus casei ATCC 334 YP_805320
Lactococcus lactis subsp. cremoris SK11 YP_808720Lactococcus lactis subsp. lactis Il1403 NP_266860
Lactococcus lactis subsp. cremoris MG1363 YP_001033135
Enterococcus faecalis V583 NP_815724
Lactobacillus salivarius UCC118 YP_535923
Lactobacillus reuteri F275 YP_001271110
Streptococcus agalactiae 2603V R NP_688732
Streptococcus agalactiae NEM316 NP_736221
Streptococcus agalactiae A909 YP_330350
Lactobacillus plantarum WCFS1 NP_784802
Lactobacillus brevis ATCC 367 YP_795748
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 YP_818047
Leuconostoc citreum KM20 YP_001727748
Oenococcus oeni PSU-1 YP_811337
Lactobacillus casei ATCC 334 YP_807394
Lactobacillus johnsonii NCC 533 NP_965789
Lactobacillus gasseri ATCC 33323 YP_819534
Herpetosiphon aurantiacus ATCC 23779 YP_001546523Deinococcus geothermalis DSM 11300 YP_594212
Acidothermus cellulolyticus 11B YP_872359
Leifsonia xyli subsp. xyli str. CTCB07 YP_062182
Clavibacter michiganensis subsp. michiganensis NCPPB 382 YP_001222283
Clavibacter michiganensis subsp. sepedonicus YP_001710473
Thermobifida fusca YX YP_288699
Streptomyces coelicolor A32 NP_628129
Streptomyces avermitilis MA-4680 NP_825437
Nocardioides sp. JS614 YP_922152
Propionibacterium acnes KPA171202 YP_054891
Kineococcus radiotolerans SRS30216 YP_001361392
Salinispora tropica CNB-440 YP_001159165
Salinispora arenicola CNS-205 YP_001537316
Saccharopolyspora erythraea NRRL 2338 YP_001102421
Renibacterium salmoninarum ATCC 33209 YP_001625560
Arthrobacter sp. FB24 YP_831116
Arthrobacter aurescens TC1 YP_947528
Nocardia farcinica IFM 10152 YP_116794
Rhodococcus sp. RHA1 YP_704790
Mycobacterium abscessus YP_001703364
Corynebacterium diphtheriae NCTC 13129 NP_940235
Corynebacterium urealyticum DSM 7109 YP_001799459
Corynebacterium efficiens YS-314 NP_737863
Corynebacterium glutamicum R YP_001138114
Corynebacterium glutamicum ATCC 13032 NP_600377
Corynebacterium glutamicum ATCC 13032 YP_225441
Mycobacterium vanbaalenii PYR-1 YP_953643
Mycobacterium gilvum PYR-GCK YP_001134847
Mycobacterium sp. JLS YP_001071322
Mycobacterium sp. MCS YP_640199
Mycobacterium sp. KMS YP_939079
Mycobacterium smegmatis str. MC2 155 YP_887546
Mycobacterium avium subsp. paratuberculosis K-10 NP_960250
Mycobacterium avium 104 YP_882347
Mycobacterium bovis BCG str. Pasteur 1173P2 YP_977753Mycobacterium tuberculosis H37Ra YP_001282941
Mycobacterium tuberculosis F11 YP_001287584
Mycobacterium bovis AF2122 97 NP_855302
Mycobacterium tuberculosis H37Rv YP_177824
Mycobacterium tuberculosis CDC1551 NP_336115
Desulfotalea psychrophila LSv54 YP_064662
Porphyromonas gingivalis W83 NP_905143
Parabacteroides distasonis ATCC 8503 YP_001303989Bacteroides vulgatus ATCC 8482 YP_001300067
Bacteroides thetaiotaomicron VPI-5482 NP_810123
Bacteroides fragilis YCH46 YP_099157
Bacteroides fragilis NCTC 9343 YP_211570
Nitratiruptor sp. SB155-2 YP_001355620
Arcobacter butzleri RM4018 YP_001490018
Campylobacter curvus 525.92 YP_001409213
Campylobacter concisus 13826 YP_001467777
Campylobacter hominis ATCC BAA-381 YP_001406208
Wolinella succinogenes DSM 1740 NP_907966
Helicobacter hepaticus ATCC 51449 NP_860634
Campylobacter jejuni RM1221 YP_178101
Campylobacter jejuni subsp. jejuni 81-176 YP_999807
Campylobacter jejuni subsp. jejuni NCTC 11168 NP_281294
Campylobacter jejuni subsp. jejuni 81116 YP_001481651
Campylobacter jejuni subsp. doylei 269.97 YP_001397340
Acidiphilium cryptum JF-5 YP_001234760
Coxiella burnetii RSA 331 YP_001596164
Coxiella burnetii Dugway 5J108-111 YP_001425202
Coxiella burnetii RSA 493 NP_819263
Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677353
Francisella tularensis subsp. holarctica YP_512984
Francisella tularensis subsp. holarctica OSU18 YP_762850
Francisella tularensis subsp. holarctica FTA YP_001427637
Francisella tularensis subsp. tularensis SCHU S4 YP_169329
Francisella tularensis subsp. tularensis FSC198 YP_666461
Francisella tularensis subsp. tularensis WY96-3418 YP_001122598
Francisella tularensis subsp. novicida U112 YP_897857
Coxiella burnetii RSA 493 NP_819973
Coxiella burnetii RSA 331 YP_001596747
Coxiella burnetii Dugway 5J108-111 YP_001424453
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_095233
Legionella pneumophila str. Lens YP_126561
Legionella pneumophila str. Paris YP_123528
Legionella pneumophila str. Corby YP_001249996Xanthomonas campestris pv. campestris str. ATCC 33913 NP_637588
Xanthomonas campestris pv. campestris str. 8004 YP_242968
Xanthomonas axonopodis pv. citri str. 306 NP_642653
Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364266
Bordetella petrii DSM 12804 YP_001629059
Bordetella pertussis Tohama I NP_879142
Bordetella bronchiseptica RB50 NP_891032
Bordetella parapertussis 12822 NP_886170Methylobacterium extorquens PA1 YP_001638832
Hyphomonas neptunium ATCC 15444 YP_760367
Sphingomonas wittichii RW1 YP_001264219
Caulobacter crescentus CB15 NP_419579
Caulobacter sp. K31 YP_001682265
Delftia acidovorans SPH-1 YP_001563420
Herminiimonas arsenicoxydans YP_001099673
Janthinobacterium sp. Marseille YP_001353704
Azorhizobium caulinodans ORS 571 YP_001523500
Rhizobium leguminosarum bv. viciae 3841 YP_765564
Agrobacterium tumefaciens str. C58 NP_356555
Ochrobactrum anthropi ATCC 49188 YP_001372076
Brucella suis ATCC 23445 YP_001622325
Brucella canis ATCC 23365 YP_001594460
Brucella abortus biovar 1 str. 9-941 YP_223479
Brucella suis 1330 NP_699697
Brucella melitensis biovar Abortus 2308 YP_418900
Brucella melitensis 16M NP_541738
Brucella ovis ATCC 25840 YP_001257479
Dichelobacter nodosus VCS1703A YP_001209030
Psychrobacter sp. PRwf-1 YP_001279232
Rhodoferax ferrireducens T118 YP_523610
Azoarcus sp. BH72 YP_932736
Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_856176
Aeromonas salmonicida subsp. salmonicida A449 YP_001142488
Burkholderia xenovorans LB400 YP_556904
Burkholderia xenovorans LB400 YP_559109
Burkholderia multivorans ATCC 17616 YP_001578676
Burkholderia cenocepacia AU 1054 YP_622077
Burkholderia cenocepacia HI2424 YP_836460
Burkholderia cenocepacia MC0-3 YP_001766109
Burkholderia vietnamiensis G4 YP_001120748
Burkholderia sp. 383 YP_370385
Burkholderia ambifaria AMMD YP_774767
Burkholderia ambifaria MC40-6 YP_001809428Burkholderia thailandensis E264 YP_441012
Burkholderia mallei NCTC 10229 YP_001027424
Burkholderia pseudomallei 668 YP_001057598
Burkholderia mallei SAVP1 YP_991499
Burkholderia mallei NCTC 10247 YP_001082389
Burkholderia pseudomallei 1106a YP_001064844
Burkholderia pseudomallei 1710b YP_332143
Burkholderia pseudomallei K96243 YP_107128
Burkholderia mallei ATCC 23344 YP_104657Methylococcus capsulatus str. Bath YP_113575
Marinomonas sp. MWYL1 YP_001340368
Pseudomonas stutzeri A1501 YP_001171817
Acinetobacter sp. ADP1 YP_046898
Acinetobacter baumannii SDF YP_001707382
Acinetobacter baumannii ATCC 17978 YP_001084953
Acinetobacter baumannii AYE YP_001713530
Rhodopseudomonas palustris HaA2 YP_484550Colwellia psychrerythraea 34H YP_268606
Pseudoalteromonas haloplanktis TAC125 YP_340517
Pseudoalteromonas atlantica T6c YP_661029
Psychromonas ingrahamii 37 YP_942171
Shewanella frigidimarina NCIMB 400 YP_749833
Shewanella denitrificans OS217 YP_562283
Shewanella amazonensis SB2B YP_928224
Shewanella loihica PV-4 YP_001093431
Shewanella sediminis HAW-EB3 YP_001474850
Shewanella woodyi ATCC 51908 YP_001759946
Shewanella pealeana ATCC 700345 YP_001501180
Shewanella halifaxensis HAW-EB4 YP_001673607
Shewanella baltica OS155 YP_001051330
Shewanella baltica OS195 YP_001555559
Shewanella baltica OS185 YP_001367187
Shewanella sp. W3-18-1 YP_962763
Shewanella putrefaciens CN-32 YP_001184161
Shewanella oneidensis MR-1 NP_718840
Shewanella sp. ANA-3 YP_868882
Shewanella sp. MR-4 YP_733376
Shewanella sp. MR-7 YP_737366
Haemophilus ducreyi 35000HP_NP_874145
Actinobacillus pleuropneumoniae L20 YP_001053006
Actinobacillus pleuropneumoniae serovar 3 str. JL03 YP_001651345
Pasteurella multocida subsp. multocida str. Pm70 NP_245911
Haemophilus somnus 129PT YP_718464
Haemophilus somnus 2336 YP_001783482
Mannheimia succiniciproducens MBEL55E YP_087907
Actinobacillus succinogenes 130Z YP_001345083
Haemophilus influenzae 86-028NP_YP_248744
Haemophilus influenzae Rd KW20 NP_439232
Haemophilus influenzae PittGG YP_001292989
Haemophilus influenzae PittEE YP_001291064
Escherichia coli UTI89 YP_540061
Escherichia coli APEC O1 YP_852100Salmonella enterica subsp. arizonae serovar 62 YP_001570193
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_150363
Salmonella typhimurium LT2 NP_460748
Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_456301
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001587668
Shigella sonnei Ss046 YP_309953
Escherichia coli CFT073 NP_753044
Shigella dysenteriae Sd197 YP_402616Escherichia coli str. K-12 substr. MG1655 NP_415497
Escherichia coli str. K12 substr. W3110 AP_001607
Escherichia coli DH10B YP_001729955
Escherichia coli HS YP_001457815
Escherichia coli E24377A YP_001462209
Escherichia coli 536 YP_668897
Shigella flexneri 5 str. 8401 YP_688512
Shigella flexneri 2a str. 2457T NP_836687
Escherichia coli O157 H7 str. Sakai NP_309161
Escherichia coli O157 H7 EDL933 NP_286915
Shigella flexneri 2a str. 301 NP_706901
Escherichia coli SECEC SMS-3-5 YP_001744190
Shigella boydii Sb227 YP_408646
Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_858102
Aeromonas salmonicida subsp. salmonicida A449 YP_001140647
Photobacterium profundum SS9 YP_130739
Vibrio fischeri ES114 YP_204336
Vibrio cholerae O1 biovar eltor str. N16961 NP_231478
Vibrio cholerae O395 YP_001217378
Vibrio vulnificus CMCP6 NP_761020
Vibrio vulnificus YJ016 NP_935076
Vibrio cholerae O1 biovar eltor str. N16961 NP_233258
Vibrio cholerae O395 YP_001215206
Vibrio parahaemolyticus RIMD 2210633 NP_797432
Vibrio harveyi ATCC BAA-1116 YP_001444799
Yersinia enterocolitica subsp. enterocolitica 8081 YP_001007127
Yersinia pestis CO92 NP_404730
Yersinia pestis KIM NP_670362Yersinia pseudotuberculosis IP_32953 YP_069686
Yersinia pestis biovar Microtus str. 91001 NP_992412
Yersinia pestis Antiqua YP_650508
Yersinia pestis Nepal516 YP_648808
Yersinia pestis Pestoides F YP_001163920
Yersinia pseudotuberculosis IP_31758 YP_001401839
Yersinia pestis Angola YP_001605914Yersinia pseudotuberculosis YPIII YP_001721691Photorhabdus luminescens subsp. laumondii TTO1 NP_928745
Serratia proteamaculans 568 YP_001477503
Pectobacterium atrosepticum SCRI1043 YP_051089
Pectobacterium atrosepticum SCRI1043 YP_049471
Sodalis glossinidius str. morsitans YP_454560
Enterobacter sakazakii ATCC BAA-894 YP_001438690
Enterobacter sp. 638 YP_001175962
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334409
Citrobacter koseri ATCC BAA-895 YP_001453963
Salmonella enterica subsp. arizonae serovar 62 YP_001571210
Salmonella typhimurium LT2 NP_459725
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001588992
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151218
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215731
Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_455296
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_805890
Escherichia coli str. K12 substr. W3110 AP_001370
Shigella flexneri 2a str. 2457T NP_836275
Escherichia coli str. K-12 substr. MG1655 NP_415261
Escherichia coli UTI89 YP_539751
Shigella boydii Sb227 YP_407107
Escherichia coli O157 H7 str. Sakai NP_308795
Escherichia coli CFT073 NP_752741
Escherichia coli DH10B YP_001729719
Escherichia coli E24377A YP_001461893
Shigella sonnei Ss046 YP_309676
Escherichia coli 536 YP_668668
Shigella dysenteriae Sd197 YP_402357
Shigella flexneri 2a str. 301 NP_706501
Escherichia coli HS YP_001457533
Escherichia coli O157 H7 EDL933 NP_286461
Escherichia coli APEC O1 YP_851837
Escherichia coli SECEC SMS-3-5 YP_001742843
Shigella flexneri 5 str. 8401 YP_688161
0.1
73413368701000
1000978
10001000
937
982
1000
991987
506
510
992
756
1000874
1000
983
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137
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345
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169
58
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548
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1000858
1000
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8441000
687
716
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720
779
459
827
1000
1000
8373631000
913
8071000
2708021000
910
304
572
1000
974426
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1000
123
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445
1000760529893
691
107
294
1000
233
910
5951000
995
664
6491000
1000
1000
346
250
1000
1000
780
1000549
999
1000
450
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998
1000
346
1000
1000
896
947
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444
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381
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482
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540
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523
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810
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113
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288
143
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47
155
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775
535
535
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575
991
976
998
921
793
537
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734
486
414
17
899
689
422
136
182
71
84
122
752
449
623
374
770
412
488
924
180
838
1000
1000
1000
184112
113
920723
419294
9
7511000449
628739
668
802996
5431000961880502
319
768
363
71
279
326
924
649696428998
1000
309
607
686
658
706553
946
1000
273
362
827
589
432
572
124
536
772
7851000
829
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861
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807
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682
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551
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922
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591
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522
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412
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1000
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738
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880
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527
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502
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992804
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92
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221
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475
196
166
93
468
258
487
845
542
941
879
875
597
436
621
348
822
518
Euryarchaeota (Halobacteriales)
ActinobacteriaChloroflexiFirmicuteBacteroidetes/ChlorobiDelta-Proteobacteria
FirmicutesEuryarchaota (Thermoplasmatales)
Cyanobacteria
Delta-ProteobacteriaBeta-Proteobacteria
Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria
Alpha-proteobacteriaBeta-ProteobacteriaGamma-Proteobacteria
Epsilon-Proteobacteria
Bacteroidetes
Actinobacteria
FirmicutesBacteroidetes/ChlorobiEuryarchaeota (Methanosarcinales)
ChloroflexiDeinococcus/Thermus
Delta-Proteobacteria
FirmicutesAquificales
PVCDelta-Proteobacteria
Bacteroidetes/ChlorobiAcidobacteria
Suppl. Mat. 2
0.1
Symbiobacterium thermophilum IAM 14863 YP_076979Solibacter usitatus Ellin6076 YP_824765
Candidatus Protochlamydia amoebophila UWE25 YP_008977Gramella forsetii KT0803 YP_861439Flavobacterium psychrophilum JIP02 86 YP_001295831
Methylobacillus flagellatus KT YP_545543Salinibacter ruber DSM 13855 YP_444468
Ralstonia metallidurans CH34 YP_584521Burkholderia thailandensis E264 YP_439812Burkholderia ambifaria MC40-6 YP_001811293
Azoarcus sp. EbN1 YP_158648Ralstonia solanacearum GMI1000 NP_522554Ralstonia metallidurans CH34 YP_586456Polaromonas sp. JS666 YP_548116
Nitrosomonas eutropha C91 YP_747791Rhodoferax ferrireducens T118 YP_525356
Synechococcus elongatus PCC 7942 YP_399221Synechococcus elongatus PCC 6301 YP_172019
Chlorobium chlorochromatii CaD3 YP_379659Anaeromyxobacter dehalogenans 2CP-C YP_464382Anaeromyxobacter sp. Fw109-5 YP_001378410
Helicobacter hepaticus ATCC 51449 NP_860787Wolinella succinogenes DSM 1740 NP_906440Helicobacter acinonychis str. Sheeba YP_664165Helicobacter pylori J99 NP_222853Helicobacter pylori 26695 NP_206943Helicobacter pylori HPAG1 YP_626883
Sulfurimonas denitrificans DSM 1251 YP_392597Arcobacter butzleri RM4018 YP_001490968Nitratiruptor sp. SB155-2 YP_001357081Sulfurovum sp. NBC37-1 YP_001357495
Campylobacter hominis ATCC BAA-381 YP_001406948Campylobacter fetus subsp. fetus 82-40 YP_891580
Campylobacter curvus 525.92 YP_001407573Campylobacter jejuni subsp. doylei 269.97 YP_001398790Campylobacter jejuni subsp. jejuni 81-176 YP_001001138Campylobacter jejuni subsp. jejuni 81116 YP_001482970Campylobacter jejuni RM1221 YP_179644Campylobacter jejuni subsp. jejuni NCTC 11168 NP_282628
Leptospira borgpetersenii serovar Hardjo-bovis L550 YP_798081Leptospira borgpetersenii serovar Hardjo-bovis JB197 YP_800805
Bdellovibrio bacteriovorus HD100 NP_969411Myxococcus xanthus DK 1622 YP_633680Rhodopirellula baltica SH 1 NP_867199Cytophaga hutchinsonii ATCC 33406 YP_677753
Candidatus Sulcia muelleri GWSS YP_001597952Gramella forsetii KT0803 YP_861474Flavobacterium johnsoniae UW101 YP_001194883Flavobacterium psychrophilum JIP02 86 YP_001296054
Thiobacillus denitrificans ATCC 25259 YP_314096Methylobacillus flagellatus KT YP_544740
Magnetococcus sp. MC-1 YP_866259Thiomicrospira crunogena XCL-2 YP_392229
Candidatus Ruthia magnifica str. Cm Calyptogena magnifica YP_903313Candidatus Vesicomyosocius okutanii HA YP_001218903
Rhodospirillum rubrum ATCC 11170 YP_428413Silicibacter pomeroyi DSS-3 YP_165019Sphingomonas wittichii RW1 YP_001262300Mesorhizobium sp. BNC1 YP_674805Rhizobium leguminosarum bv. viciae 3841 YP_766146Sinorhizobium meliloti 1021 NP_435566Sinorhizobium medicae WSM419 YP_001314551
Parvibaculum lavamentivorans DS-1 YP_001412808Caulobacter crescentus CB15 NP_420214Caulobacter sp. K31 YP_001684062
Maricaulis maris MCS10 YP_756380Hyphomonas neptunium ATCC 15444 YP_759950
Methylobacterium sp. 4-46 YP_001770109Xanthobacter autotrophicus Py2 YP_001415374Azorhizobium caulinodans ORS 571 YP_001527439
Rhodopseudomonas palustris CGA009 NP_945375Rhodopseudomonas palustris HaA2 YP_483640Rhodopseudomonas palustris BisB5 YP_567869Rhodopseudomonas palustris BisB18 YP_529913Rhodopseudomonas palustris BisA53 YP_778959Bradyrhizobium japonicum USDA 110 NP_769403Bradyrhizobium sp. ORS278 YP_001204500Bradyrhizobium sp. BTAi1 YP_001238831
Jannaschia sp. CCS1 YP_511799Paracoccus denitrificans PD1222 YP_915641Rhodobacter sphaeroides ATCC 17025 YP_001166745Rhodobacter sphaeroides 2.4.1 YP_353773Rhodobacter sphaeroides ATCC 17029 YP_001044225Dinoroseobacter shibae DFL 12 YP_001532008
Silicibacter pomeroyi DSS-3 YP_168721Roseobacter denitrificans OCh 114 YP_681602Silicibacter sp. TM1040 YP_614539Novosphingobium aromaticivorans DSM 12444 YP_497848Sphingopyxis alaskensis RB2256 YP_616722Mesorhizobium loti MAFF303099 NP_106928Mesorhizobium loti MAFF303099 NP_107099Agrobacterium tumefaciens str. C58 NP_354541Sinorhizobium meliloti 1021 NP_435911Sinorhizobium meliloti 1021 NP_435656Sinorhizobium medicae WSM419 YP_001314560Sinorhizobium medicae WSM419 YP_001314800Rhizobium leguminosarum bv. viciae 3841 YP_765315Rhizobium leguminosarum bv. viciae 3841 YP_770482Rhizobium etli CFN 42 NP_659746Rhizobium etli CFN 42 YP_473123Ochrobactrum anthropi ATCC 49188 YP_001369029Brucella abortus biovar 1 str. 9-941 YP_221148Brucella suis 1330 NP_697395Brucella canis ATCC 23365 YP_001592230Brucella melitensis 16M NP_540481Brucella melitensis biovar Abortus 2308 YP_413854Brucella ovis ATCC 25840 YP_001258397Brucella suis ATCC 23445 YP_001627054
Vibrio harveyi ATCC BAA-1116 YP_001447597Shewanella pealeana ATCC 700345 YP_001500817
Alcanivorax borkumensis SK2 YP_693071Psychrobacter sp. PRwf-1 YP_001280634Psychrobacter arcticus 273-4 YP_264065Psychrobacter cryohalolentis K5 YP_580051
Alkalilimnicola ehrlichei MLHE-1 YP_742716Thiobacillus denitrificans ATCC 25259 YP_314401
Ralstonia solanacearum GMI1000 NP_519397Ralstonia eutropha H16 YP_726783Ralstonia eutropha JMP134 YP_296249Ralstonia metallidurans CH34 YP_584192Polynucleobacter sp. QLW-P1DMWA-1 YP_001155237Polynucleobacter necessarius STIR1 YP_001798088
Bordetella petrii DSM 12804 YP_001631855Bordetella parapertussis 12822 NP_884049Bordetella bronchiseptica RB50 NP_889864Dechloromonas aromatica RCB YP_283939
Azoarcus sp. EbN1 YP_159939Azoarcus sp. BH72 YP_932845Chromobacterium violaceum ATCC 12472 NP_900844Neisseria gonorrhoeae FA 1090 YP_208434Neisseria meningitidis Z2491 NP_284684Neisseria meningitidis MC58 NP_274728Neisseria meningitidis 053442 YP_001599744Neisseria meningitidis FAM18 YP_975604Herminiimonas arsenicoxydans YP_001099927Janthinobacterium sp. Marseille YP_001353321Methylibium petroleiphilum PM1 YP_001021668Rhodoferax ferrireducens T118 YP_523187Polaromonas naphthalenivorans CJ2 YP_983999Polaromonas sp. JS666 YP_551095Acidovorax avenae subsp. citrulli AAC00-1 YP_969886Verminephrobacter eiseniae EF01-2 YP_995960Acidovorax sp. JS42 YP_985395Delftia acidovorans SPH-1 YP_001563798Leptothrix cholodnii SP-6 YP_001791809
Pseudoalteromonas atlantica T6c YP_661645Colwellia psychrerythraea 34H YP_268725Pseudoalteromonas haloplanktis TAC125 YP_340357Idiomarina loihiensis L2TR YP_155686Psychromonas ingrahamii 37 YP_942380
Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_856818Aeromonas salmonicida subsp. salmonicida A449 YP_001141804Photobacterium profundum SS9 YP_130037Vibrio fischeri ES114 YP_204682Vibrio harveyi ATCC BAA-1116 YP_001445492Vibrio cholerae O1 biovar eltor str. N16961 NP_231085Vibrio cholerae O395 YP_001216999Vibrio parahaemolyticus RIMD 2210633 NP_797923Vibrio vulnificus CMCP6 NP_761442Vibrio vulnificus YJ016 NP_934464Shewanella pealeana ATCC 700345 YP_001502069Shewanella halifaxensis HAW-EB4 YP_001674415Shewanella amazonensis SB2B YP_927666Shewanella loihica PV-4 YP_001094110Shewanella sediminis HAW-EB3 YP_001473948Shewanella woodyi ATCC 51908 YP_001760798
Shewanella oneidensis MR-1 NP_717954Shewanella sp. ANA-3 YP_869743Shewanella sp. MR-4 YP_734136Shewanella sp. MR-7 YP_738015Shewanella sp. W3-18-1 YP_963429Shewanella putrefaciens CN-32 YP_001183481Shewanella denitrificans OS217 YP_562858Shewanella frigidimarina NCIMB 400 YP_750694Shewanella baltica OS195 YP_001554649Shewanella baltica OS185 YP_001366375Shewanella baltica OS155 YP_001041605Shewanella baltica OS155 YP_001050566
Saccharophagus degradans 2-40 YP_527894Hahella chejuensis KCTC 2396 YP_433526Marinobacter aquaeolei VT8 YP_959053Pseudomonas aeruginosa UCBPP-PA14 YP_791695Pseudomonas aeruginosa PA7 YP_001349127Pseudomonas aeruginosa PAO1 NP_250248Pseudomonas mendocina ymP_YP_001188087Pseudomonas stutzeri A1501 YP_001172359Pseudomonas fluorescens Pf-5 YP_259044Pseudomonas fluorescens PfO-1 YP_347559Pseudomonas entomophila L48 YP_607455Pseudomonas putida W619 YP_001750420Pseudomonas putida GB-1 YP_001670042Pseudomonas putida KT2440 NP_746366Pseudomonas putida F1 YP_001266958
Pseudomonas stutzeri A1501 YP_001172356Pseudomonas mendocina ymP_YP_001188092Pseudomonas aeruginosa PA7 YP_001349131Pseudomonas aeruginosa PAO1 NP_250245Pseudomonas aeruginosa UCBPP-PA14 YP_791698
Pseudomonas fluorescens Pf-5 YP_259940Pseudomonas fluorescens PfO-1 YP_348243
Pseudomonas aeruginosa PA7 YP_001346344Pseudomonas aeruginosa PAO1 NP_252822Pseudomonas aeruginosa UCBPP-PA14 YP_788989
Pseudomonas aeruginosa PA7 YP_001348796Pseudomonas aeruginosa PAO1 NP_250547Pseudomonas aeruginosa UCBPP-PA14 YP_791385
Pseudomonas fluorescens PfO-1 YP_347555Pseudomonas fluorescens Pf-5 YP_259040Pseudomonas syringae pv. tomato str. DC3000 NP_791827Pseudomonas syringae pv. syringae B728a YP_236483Pseudomonas syringae pv. phaseolicola 1448A YP_275495
Pseudomonas entomophila L48 YP_607451Pseudomonas putida KT2440 NP_746371Pseudomonas putida F1 YP_001266953Pseudomonas putida GB-1 YP_001670046Pseudomonas putida W619 YP_001750424
825993
618
984
828999
1000
9881000
919
8301000
596
9281000
789
393
291
925
268
637
658
430
694
747
912
999
1000
509
965705
983
366
271
846785
4741000
976
822
447
815
822831
340340
997409
997
1000676
691
524
910
733
363
927
687743
277
224
845541
993
447
994
489
936
652
924977
445430
915
1000
602
1000
929
476
342136
101
131
312
939
613
547
588
696
452
690
1000
1000
945
971
364201
275
809
1000
8291000
781
5811000
444
1000
9981000
173
427
930
438
568574
959
10001000
200183347
244
992607
712409
1000
195
119
1000
1000
274
451
825
903
1000
9991000
935
1000
1000
1000
473
733
386
999
627990
759
998742
535
988
486
848
573
409
470
372
998
960
523
934
641265
476
908203
915
1000
595
735
914
667
1000
773
999928
529
989
615
965
1000
1000
596
635
997
919
1000
876
1000
929
970658
6491000
983
585
878
596
1000
890
1000
1000999
704
7038861000
992
1000
800
354
Suppl. Mat. 3
Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria
Delta-ProteobacteriaBacteroidetes/ChlorobiPVC
Spirochetes
Epsilon-Proteobacteria
Delta-ProteobacteriaBacteroidetes/Chlorobi
Cyanobacteria
Beta-ProteobacteriaBacteroidetes/Chlorobi
FirmicutesAcidobacteriaPVC
0.1
589
871.
63/.7880/.77
27/.96
35/.
100/1.
948100/1.
721
1000
1000
1000
1000
1000
1000
500
8391000
1000
1000993
1000985
413
480
1000
908
524
1000883
1000
1000
996521
938
1000
457
9991000
1000960
873988
456
1000.
614478
558
1000
875
990
1000
1000
335
453
381
806
987
536
795
Sulfolobus acidocaldarius DSM 639 YP_254815
Sulfolobus solfataricus P2 NP_341619
Metallosphaera sedula DSM 5348 YP_001192096
Sulfolobus tokodaii str. 7 NP_378042
Metallosphaera sedula DSM 5348 YP_001190669
Sulfolobus tokodaii str. 7 NP_376567
Sulfolobus tokodaii str. 7 NP_376500
Sulfolobus tokodaii str. 7 NP_378599
Metallosphaera sedula DSM 5348 YP_001190585
Metallosphaera sedula DSM 5348 YP_001190586
Sulfolobus tokodaii str. 7 NP_378396
Metallosphaera sedula DSM 5348 YP_001190391
Sulfolobus tokodaii str. 7 NP_375983
Sulfolobus solfataricus P2 NP_343985
Sulfolobus acidocaldarius DSM 639 YP_256675
Caldivirga maquilingensis IC-167 YP_001541744
Geobacillus thermodenitrificans NG80-2 YP_001125633
Geobacillus kaustophilus HTA426 YP_147524
Nitrosospira multiformis ATCC 25196 YP_413345
Azoarcus sp. EbN1 YP_159094
Nitrobacter hamburgensis X14 YP_577950
Silicibacter pomeroyi DSS-3 YP_165013
Nitrosococcus oceani ATCC 19707 YP_344942
Nitrosomonas eutropha C91 YP_748072
Nitrosomonas europaea ATCC 19718 NP_840762
Nocardioides sp. JS614 YP_922823
Sulfurovum sp. NBC37-1 YP_001357604
Sulfurimonas denitrificans DSM 1251 YP_392620
Natronomonas pharaonis DSM 2160 YP_330877
Magnetospirillum magneticum AMB-1 YP_421585
Aeropyrum pernix K1 NP_148062
Pyrobaculum calidifontis JCM 11548 YP_001056831
Pyrobaculum aerophilum str. IM2 NP_559246
Aquifex aeolicus VF5 NP_214506
Exiguobacterium sibiricum 255-15 YP_001813096
Bacillus halodurans C-125 NP_241605
Oceanobacillus iheyensis HTE831 NP_692667
Geobacillus thermodenitrificans NG80-2 YP_001125509
Geobacillus kaustophilus HTA426 YP_147399Salinibacter ruber DSM 13855 YP_444460Halobacterium salinarum R1 YP_001689972
Halobacterium sp. NRC-1 NP_444237
Haloarcula marismortui ATCC 43049 YP_135811
Natronomonas pharaonis DSM 2160 YP_327130
Halorubrum lacusprofundi ATCC 49239 ZP_02014739
Chloroflexus aurantiacus J-10-fl YP_001636024
Roseiflexus castenholzii DSM 13941 YP_001431686
Roseiflexus sp. RS-1 YP_001275293
Deinococcus geothermalis DSM 11300 YP_603490
Thermus thermophilus HB8 YP_144401
Thermus thermophilus HB27 YP_004743
Methylococcus capsulatus str. Bath YP_114811
Burkholderia xenovorans LB400 YP_556973
Burkholderia sp. 383 YP_372161
Rhizobium etli CFN 42 YP_468520
Bradyrhizobium japonicum USDA 110 NP_771120
Bradyrhizobium sp. ORS278 YP_001204332
Burkholderia vietnamiensis G4 YP_001115325
Burkholderia multivorans ATCC 17616 YP_001585717
Burkholderia thailandensis E264 YP_443386
Burkholderia pseudomallei 668 YP_001058396
Burkholderia pseudomallei 1710b YP_332896
Burkholderia pseudomallei K96243 YP_107881
Burkholderia pseudomallei 1106a YP_001065632
Crenarchaeota(Sulfolobales)
Crenarchaeota(Thermoproteales,Desulfurococcales)
Crenarchaeota(Thermoproteales)
Euryarchaeota(Halobacteriales)
Euryarchaeota(Halobacteriales)
Alpha-Proteobacteria
Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria
Deinococcus/Thermus
Chloroflexi
Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria
Firmicutes
Firmicutes
Actinobacteria
Epsilon-proteobacteria
Aquificales
BacteroidetesChlorobi
Dox
Suppl. Mat. 4
Picrophilus torridus DSM 9790 YP_024082Ferroplasma acidarmanus fer1 ZP_01709051
Aeropyrum pernix K1 NP_147500Halorubrum lacusprofundi ATCC 49239 ZP_02015599Haloarcula marismortui ATCC 43049 YP_136841
Haloferax volcanii AAK14378Nitrosopumilus maritimus SCM1 YP_001581518Cenarchaeum symbiosum A YP_876890
Pyrobaculum aerophilum str. IM2 NP_559235Pyrobaculum calidifontis JCM 11548 YP_001056825Sulfolobus acidocaldarius DSM 639 YP_256842Sulfolobus solfataricus P2 NP_344288
Sulfolobus tokodaii str. 7 NP_375951Metallosphaera sedula DSM 5348 YP_001190425
Haloarcula marismortui ATCC 43049 YP_135564Halobacterium sp. NRC-1 NP_279674Halobacterium salinarum R1 YP_001688771Natronomonas pharaonis DSM 2160 YP_326879Haloarcula marismortui ATCC 43049 YP_135922Haloquadratum walsbyi DSM 16790 YP_657381Haloferax volcanii AAK14377
Deinococcus radiodurans R1 NP_296339Deinococcus geothermalis DSM 11300 YP_603878
Thermus thermophilus HB27 YP_005640Thermus thermophilus HB8 YP_143578
Aquifex aeolicus VF5 NP_214504Geobacter uraniireducens Rf4 YP_001229197
Pelobacter carbinolicus DSM 2380 YP_357934Geobacter sulfurreducens PCA NP_951280Geobacter metallireducens GS-15 YP_383219
Desulfovibrio desulfuricans G20 YP_388315Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough YP_011033Desulfovibrio vulgaris subsp. vulgaris DP4 YP_966790
Bdellovibrio bacteriovorus HD100 NP_967290Leptospira interrogans serovar Lai str. 56601 NP_710424Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 YP_000200Leptospira borgpetersenii serovar Hardjo-bovis L550 YP_796822Leptospira borgpetersenii serovar Hardjo-bovis JB197 YP_801959Sorangium cellulosum So ce 56 YP_001618242
Rhodopirellula baltica SH 1 NP_870646Salinibacter ruber DSM 13855 YP_446205
Anaeromyxobacter dehalogenans 2CP-C YP_465481Sorangium cellulosum So ce 56 YP_001615167
Myxococcus xanthus DK 1622 YP_632048Myxococcus xanthus DK 1622 YP_634222Anaeromyxobacter dehalogenans 2CP-C YP_464016Anaeromyxobacter sp. Fw109-5 YP_001378044
Chloroflexus aurantiacus J-10-fl YP_001635743Acidobacteria bacterium Ellin345 YP_592070Solibacter usitatus Ellin6076 YP_821793
Gluconacetobacter diazotrophicus PAl 5 YP_001602839Methylobacterium radiotolerans JCM 2831 YP_001753729
Nitrosococcus oceani ATCC 19707 YP_343276Ralstonia eutropha JMP134 YP_298631
Nitrobacter hamburgensis X14 YP_571634Methylobacterium sp. 4-46 YP_001772537
Methylobacterium extorquens PA1 YP_001637720Methylobacterium radiotolerans JCM 2831 YP_001766956
Anabaena variabilis ATCC 29413 YP_324077Synechocystis sp. PCC 6803 NP_441291
Anabaena variabilis ATCC 29413 YP_320079Cyanothece sp. ATCC 51142 YP_001806228Cyanothece sp. ATCC 51142 YP_001805524Trichodesmium erythraeum IMS101 YP_720232Nostoc sp. PCC 7120 NP_486772Anabaena variabilis ATCC 29413 YP_324793Synechococcus sp. PCC 7002 YP_001733987
Prochlorococcus marinus str. MIT 9515 YP_001011578Prochlorococcus marinus str. MIT 9215 YP_001484863
Synechococcus sp. WH 7803 YP_001224437Synechococcus sp. RCC307 YP_001228191
Synechococcus sp. CC9605 YP_381293Synechococcus sp. WH 8102 NP_897622Synechococcus sp. CC9311 YP_731131
Gloeobacter violaceus PCC 7421 NP_925109Gloeobacter violaceus PCC 7421 NP_923686
Trichodesmium erythraeum IMS101 YP_721510Thermosynechococcus elongatus BP-1 NP_682800Nostoc sp. PCC 7120 NP_486555Anabaena variabilis ATCC 29413 YP_320968
Synechococcus sp. JA-3-3Ab YP_474942Synechococcus sp. JA-2-3Ba2-13 YP_478886
Acaryochloris marina MBIC11017 YP_001518912Nostoc sp. PCC 7120 NP_484994Anabaena variabilis ATCC 29413 YP_321048
Synechococcus sp. PCC 7002 YP_001734418Cyanothece sp. ATCC 51142 YP_001803392Synechocystis sp. PCC 6803 NP_440609Microcystis aeruginosa NIES-843 YP_001657308
Synechococcus elongatus PCC 6301 YP_172217Synechococcus elongatus PCC 7942 YP_401620
Synechococcus sp. WH 8102 NP_897953Synechococcus sp. CC9902 YP_377756Synechococcus sp. CC9605 YP_380936Synechococcus sp. RCC307 YP_001226927
Synechococcus sp. CC9311 YP_731328Synechococcus sp. WH 7803 YP_001225595Prochlorococcus marinus str. MIT 9313 NP_895169Prochlorococcus marinus str. MIT 9303 YP_001016658Prochlorococcus marinus str. MIT 9211 YP_001550327Prochlorococcus marinus subsp. marinus str. CCMP1375 NP_874835Prochlorococcus marinus str. NATL2A YP_292967Prochlorococcus marinus str. NATL1A YP_001014326Prochlorococcus marinus subsp. pastoris str. CCMP1986 NP_892563Prochlorococcus marinus str. MIT 9515 YP_001010823Prochlorococcus marinus str. MIT 9312 YP_396941Prochlorococcus marinus str. AS9601 YP_001008895Prochlorococcus marinus str. MIT 9215 YP_001483726Prochlorococcus marinus str. MIT 9301 YP_001090693
Anaeromyxobacter sp. Fw109-5 YP_001380045Acidobacteria bacterium Ellin345 YP_589517
Solibacter usitatus Ellin6076 YP_826822Cytophaga hutchinsonii ATCC 33406 YP_678811Flavobacterium psychrophilum JIP02 86 YP_001295310Flavobacterium johnsoniae UW101 YP_001193992
Gramella forsetii KT0803 YP_860231Herminiimonas arsenicoxydans YP_001099422Polaromonas sp. JS666 YP_547581Leptothrix cholodnii SP-6 YP_001789293
Ralstonia metallidurans CH34 YP_586093Ralstonia eutropha JMP134 YP_297835Ralstonia eutropha H16 YP_841573Ralstonia solanacearum GMI1000 NP_523124Burkholderia sp. 383 YP_367049Burkholderia ambifaria AMMD YP_778088Burkholderia ambifaria MC40-6 YP_001815927
Photobacterium profundum SS9 YP_132060Methylobacterium sp. 4-46 YP_001770700Mesorhizobium loti MAFF303099 NP_102720Bradyrhizobium japonicum USDA 110 NP_770424Rhizobium etli CFN 42 YP_470115Rhizobium leguminosarum bv. viciae 3841 YP_768626Mesorhizobium sp. BNC1 YP_675024Sinorhizobium meliloti 1021 NP_386623Sinorhizobium medicae WSM419 YP_001328093
Neorickettsia sennetsu str. Miyayama YP_506501Wolbachia endosymbiont of Drosophila melanogaster NP_966102Wolbachia endosymbiont strain TRS of Brugia malayi YP_198138Anaplasma marginale str. St. Maries YP_154146Anaplasma phagocytophilum HZ YP_505633Ehrlichia chaffeensis str. Arkansas YP_507790Ehrlichia canis str. Jake YP_303439Ehrlichia ruminantium str. Welgevonden YP_180637Ehrlichia ruminantium str. Welgevonden YP_197694Ehrlichia ruminantium str. Gardel YP_196734
Orientia tsutsugamushi str. Boryong YP_001249069Rickettsia prowazekii str. Madrid E NP_220786Rickettsia akari str. Hartford YP_001493401Rickettsia canadensis str. McKiel YP_001492392Rickettsia felis URRWXCal2 YP_246643Rickettsia bellii RML369-C YP_538061Rickettsia bellii OSU 85-389 YP_001495898Rickettsia massiliae MTU5 YP_001499310Rickettsia conorii str. Malish 7 NP_360190Rickettsia rickettsii str. Sheila Smith YP_001494671Rickettsia rickettsii str. Iowa YP_001649930
Granulibacter bethesdensis CGDNIH1 YP_746079Acidiphilium cryptum JF-5 YP_001235284
Magnetospirillum magneticum AMB-1 YP_421532Jannaschia sp. CCS1 YP_509192Dinoroseobacter shibae DFL 12 YP_001533720Roseobacter denitrificans OCh 114 YP_682261Silicibacter sp. TM1040 YP_614285Silicibacter pomeroyi DSS-3 YP_166625
Paracoccus denitrificans PD1222 YP_915727Paracoccus denitrificans PD1222 YP_916807
Rhodobacter sphaeroides ATCC 17025 YP_001166875Rhodobacter sphaeroides 2.4.1 YP_351928Rhodobacter sphaeroides ATCC 17029 YP_001042415
Hyphomonas neptunium ATCC 15444 YP_759761Maricaulis maris MCS10 YP_757463
Caulobacter crescentus CB15 NP_422200Caulobacter sp. K31 YP_001686123Sphingomonas wittichii RW1 YP_001264359Sphingopyxis alaskensis RB2256 YP_616451Erythrobacter litoralis HTCC2594 YP_457435Novosphingobium aromaticivorans DSM 12444 YP_496193
Candidatus Pelagibacter ubique HTCC1062 YP_265561Nitrobacter hamburgensis X14 YP_578831Methylobacterium sp. 4-46 YP_001769241Methylobacterium extorquens PA1 YP_001640720Methylobacterium radiotolerans JCM 2831 YP_001752742
Xanthobacter autotrophicus Py2 YP_001419524Azorhizobium caulinodans ORS 571 YP_001525875Parvibaculum lavamentivorans DS-1 YP_001411950
Nitrobacter winogradskyi Nb-255 YP_316844Nitrobacter winogradskyi Nb-255 YP_317379Nitrobacter hamburgensis X14 YP_575616Nitrobacter hamburgensis X14 YP_578651
Rhodopseudomonas palustris CGA009 NP_946185Rhodopseudomonas palustris HaA2 YP_488181Rhodopseudomonas palustris BisB5 YP_567954Rhodopseudomonas palustris BisB18 YP_534629Rhodopseudomonas palustris BisA53 YP_783651Bradyrhizobium japonicum USDA 110 NP_767811Bradyrhizobium sp. ORS278 YP_001208524Bradyrhizobium sp. BTAi1 YP_001236997Mesorhizobium sp. BNC1 YP_673307Mesorhizobium loti MAFF303099 NP_107796Sinorhizobium meliloti 1021 NP_385011Sinorhizobium medicae WSM419 YP_001326210Agrobacterium tumefaciens str. C58 NP_353792Rhizobium etli CFN 42 YP_468491Rhizobium leguminosarum bv. viciae 3841 YP_766633Ochrobactrum anthropi ATCC 49188 YP_001369142Brucella abortus biovar 1 str. 9-941 YP_221246Brucella melitensis biovar Abortus 2308 YP_413953Brucella ovis ATCC 25840 YP_001258486Brucella melitensis 16M NP_540382Brucella suis ATCC 23445 YP_001627153Brucella suis 1330 NP_697496Brucella canis ATCC 23365 YP_001592327
Dechloromonas aromatica RCB YP_284689Chromobacterium violaceum ATCC 12472 NP_900270Azoarcus sp. EbN1 YP_159414
Bordetella parapertussis 12822 NP_886335Bordetella bronchiseptica RB50 NP_891206Bordetella petrii DSM 12804 YP_001628771Bordetella petrii DSM 12804 YP_001630971
Bordetella pertussis Tohama I NP_882246Bordetella parapertussis 12822 NP_886371Bordetella bronchiseptica RB50 NP_891363Polynucleobacter sp. QLW-P1DMWA-1 YP_001156715Polynucleobacter necessarius STIR1 YP_001798332
Ralstonia solanacearum GMI1000 NP_518484Ralstonia metallidurans CH34 YP_582417Ralstonia eutropha JMP134 YP_294541Ralstonia eutropha H16 YP_724862Herminiimonas arsenicoxydans YP_001101152Janthinobacterium sp. Marseille YP_001354841Methylibium petroleiphilum PM1 YP_001022368Acidovorax sp. JS42 YP_987725Delftia acidovorans SPH-1 YP_001562703Acidovorax avenae subsp. citrulli AAC00-1 YP_972223Verminephrobacter eiseniae EF01-2 YP_996163Leptothrix cholodnii SP-6 YP_001792838Rhodoferax ferrireducens T118 YP_522942Polaromonas sp. JS666 YP_548095Polaromonas naphthalenivorans CJ2 YP_981117Acidovorax avenae subsp. citrulli AAC00-1 YP_971882Burkholderia pseudomallei 1710b YP_336750Burkholderia pseudomallei 668 YP_001061143Burkholderia pseudomallei K96243 YP_110109Burkholderia pseudomallei 1106a YP_001074155
Burkholderia xenovorans LB400 YP_556882Burkholderia vietnamiensis G4 YP_001120772Burkholderia ambifaria MC40-6 YP_001809456Burkholderia multivorans ATCC 17616 YP_001578649Burkholderia sp. 383 YP_370413Burkholderia cenocepacia AU 1054 YP_622106Burkholderia ambifaria AMMD YP_774791Burkholderia cenocepacia HI2424 YP_836489Burkholderia cenocepacia MC0-3 YP_001766138Burkholderia thailandensis E264 YP_440985Burkholderia mallei ATCC 23344 YP_104673Burkholderia pseudomallei K96243 YP_107079Burkholderia mallei NCTC 10229 YP_001027406Burkholderia pseudomallei 1710b YP_332087Burkholderia mallei NCTC 10247 YP_001082371Burkholderia pseudomallei 668 YP_001057543Burkholderia mallei SAVP1 YP_991520Burkholderia pseudomallei 1106a YP_001064791
Nitrosospira multiformis ATCC 25196 YP_410884Nitrosospira multiformis ATCC 25196 YP_412465
Nitrosomonas europaea ATCC 19718 NP_841089Nitrosomonas eutropha C91 YP_748573
Thiobacillus denitrificans ATCC 25259 YP_314084Nitrosococcus oceani ATCC 19707 YP_345017
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_096890Legionella pneumophila str. Paris YP_125263Legionella pneumophila str. Lens YP_128137Legionella pneumophila str. Corby YP_001252428Saccharophagus degradans 2-40 YP_525513Hahella chejuensis KCTC 2396 YP_431395Marinobacter aquaeolei VT8 YP_957357Pseudomonas stutzeri A1501 YP_001174628Pseudomonas mendocina ymP_YP_001185649Pseudomonas aeruginosa PA7 YP_001345577Pseudomonas aeruginosa PAO1 NP_248796Pseudomonas aeruginosa UCBPP-PA14 YP_788264Pseudomonas fluorescens Pf-5 YP_257214Pseudomonas fluorescens PfO-1 YP_345811Pseudomonas putida W619 YP_001746998Pseudomonas putida KT2440 NP_742274Pseudomonas putida F1 YP_001265479Pseudomonas entomophila L48 YP_605868Pseudomonas putida GB-1 YP_001666370Candidatus Ruthia magnifica str. Cm Calyptogena magnifica YP_903309Candidatus Vesicomyosocius okutanii HA YP_001218898Methylococcus capsulatus str. Bath YP_113374Alkalilimnicola ehrlichei MLHE-1 YP_741139
Xanthomonas campestris pv. campestris str. ATCC 33913 NP_639177Xanthomonas campestris pv. campestris str. 8004 YP_244964Xanthomonas axonopodis pv. citri str. 306 NP_644193Xanthomonas campestris pv. vesicatoria str. 85-10 YP_365736Xanthomonas oryzae pv. oryzae KACC10331 YP_202779Xanthomonas oryzae pv. oryzae MAFF 311018 YP_452948
Alcanivorax borkumensis SK2 YP_693619Pseudoalteromonas atlantica T6c YP_663798Pseudoalteromonas haloplanktis TAC125 YP_341349Psychromonas ingrahamii 37 YP_944025
Photobacterium profundum SS9 YP_128409Colwellia psychrerythraea 34H YP_267002
Idiomarina loihiensis L2TR YP_154651Vibrio parahaemolyticus RIMD 2210633 NP_800047Vibrio harveyi ATCC BAA-1116 YP_001448390Vibrio vulnificus CMCP6 NP_762523Vibrio vulnificus YJ016 NP_937171Shewanella halifaxensis HAW-EB4 YP_001672492Shewanella amazonensis SB2B YP_929356Shewanella loihica PV-4 YP_001092255Shewanella sediminis HAW-EB3 YP_001471938Shewanella pealeana ATCC 700345 YP_001503845Shewanella woodyi ATCC 51908 YP_001758573Shewanella denitrificans OS217 YP_564516Shewanella frigidimarina NCIMB 400 YP_748958Shewanella sp. MR-7 YP_739899Shewanella sp. ANA-3 YP_871616Shewanella sp. MR-4 YP_735912Shewanella sp. W3-18-1 YP_961539Shewanella putrefaciens CN-32 YP_001185289Shewanella baltica OS195 YP_001556730Shewanella baltica OS185 YP_001368360Shewanella oneidensis MR-1 NP_720123Shewanella baltica OS155 YP_001048556
Tropheryma whipplei str. Twist NP_787372Tropheryma whipplei TW08 27 NP_789455
Leifsonia xyli subsp. xyli str. CTCB07 YP_062417Clavibacter michiganensis subsp. michiganensis NCPPB 382 YP_001222583Clavibacter michiganensis subsp. sepedonicus YP_001710118Renibacterium salmoninarum ATCC 33209 YP_001624733Arthrobacter sp. FB24 YP_831696Arthrobacter aurescens TC1 YP_947955
Kineococcus radiotolerans SRS30216 YP_001362986Propionibacterium acnes KPA171202 YP_055417
Acidothermus cellulolyticus 11B YP_872249Acidothermus cellulolyticus 11B YP_872716
Thermobifida fusca YX YP_289753Thermobifida fusca YX YP_288942
Thermobifida fusca YX YP_289077Streptomyces coelicolor A32 NP_626411Streptomyces avermitilis MA-4680 NP_827224
Streptomyces coelicolor A32 NP_631290Streptomyces avermitilis MA-4680 NP_827713Nocardioides sp. JS614 YP_919310Nocardioides sp. JS614 YP_924329
Frankia sp. CcI3 YP_481589Frankia sp. EAN1pec YP_001506146Frankia sp. CcI3 YP_481112Frankia alni ACN14a YP_714342Frankia sp. EAN1pec YP_001505257Frankia alni ACN14a YP_716216
Frankia alni ACN14a YP_715300Frankia sp. CcI3 YP_482202Frankia sp. CcI3 YP_482900
Salinispora tropica CNB-440 YP_001157943Salinispora arenicola CNS-205 YP_001535885
Salinispora tropica CNB-440 YP_001158972Salinispora arenicola CNS-205 YP_001537144
Saccharopolyspora erythraea NRRL 2338 YP_001103438Saccharopolyspora erythraea NRRL 2338 YP_001109127Rhodococcus sp. RHA1 YP_707487Rhodococcus sp. RHA1 YP_704173Rhodococcus sp. RHA1 YP_706379Nocardia farcinica IFM 10152 YP_117403
Nocardia farcinica IFM 10152 YP_120507Corynebacterium jeikeium K411 YP_250256Corynebacterium urealyticum DSM 7109 YP_001800872Corynebacterium diphtheriae NCTC 13129 NP_940201Corynebacterium efficiens YS-314 NP_739028Corynebacterium glutamicum R YP_001139341Corynebacterium glutamicum ATCC 13032 NP_601724Corynebacterium glutamicum ATCC 13032 YP_226765
Mycobacterium abscessus YP_001703352Mycobacterium abscessus YP_001701786Mycobacterium ulcerans Agy99 YP_905358Mycobacterium smegmatis str. MC2 155 YP_888712Mycobacterium avium subsp. paratuberculosis K-10 NP_962025Mycobacterium avium 104 YP_883070Mycobacterium ulcerans Agy99 YP_905820Mycobacterium leprae TN NP_302190Mycobacterium tuberculosis H37Ra YP_001284419Mycobacterium tuberculosis F11 YP_001288988Mycobacterium bovis BCG str. Pasteur 1173P2 YP_979151Mycobacterium tuberculosis H37Rv NP_217559Mycobacterium tuberculosis CDC1551 NP_337644Mycobacterium bovis AF2122 97 NP_856714Mycobacterium vanbaalenii PYR-1 YP_956381Mycobacterium gilvum PYR-GCK YP_001132466Mycobacterium sp. KMS YP_937889Mycobacterium sp. JLS YP_001070112Mycobacterium sp. MCS YP_639017Mycobacterium sp. JLS YP_001071718Mycobacterium sp. MCS YP_640601Mycobacterium sp. KMS YP_939485Mycobacterium abscessus YP_001704119
Mycobacterium gilvum PYR-GCK YP_001135534Mycobacterium vanbaalenii PYR-1 YP_952903Mycobacterium sp. KMS YP_935664Mycobacterium gilvum PYR-GCK YP_001136592Mycobacterium vanbaalenii PYR-1 YP_954495Mycobacterium gilvum PYR-GCK YP_001134083Mycobacterium gilvum PYR-GCK YP_001136626
Nitrosospira multiformis ATCC 25196 YP_411159Burkholderia xenovorans LB400 YP_555356Burkholderia xenovorans LB400 YP_558837Burkholderia pseudomallei 1106a YP_001065064Burkholderia pseudomallei K96243 YP_107348Burkholderia pseudomallei 668 YP_001057822Burkholderia pseudomallei 1710b YP_332357Burkholderia multivorans ATCC 17616 YP_001585463Burkholderia vietnamiensis G4 YP_001115017Burkholderia ambifaria AMMD YP_778451Burkholderia ambifaria MC40-6 YP_001816273Burkholderia cenocepacia MC0-3 YP_001773760Burkholderia cenocepacia HI2424 YP_840161Burkholderia cenocepacia AU 1054 YP_621172Burkholderia xenovorans LB400 YP_555443Solibacter usitatus Ellin6076 YP_828106Mesorhizobium loti MAFF303099 NP_109481Rhizobium etli CFN 42 YP_471835Sinorhizobium medicae WSM419 YP_001314880Methylobacterium extorquens PA1 YP_001637594Methylobacterium sp. 4-46 YP_001769836
Methylobacillus flagellatus KT YP_545557Dinoroseobacter shibae DFL 12 YP_001542100
Nitrosococcus oceani ATCC 19707 YP_343768Rhodopirellula baltica SH 1 NP_866086Rhodobacter sphaeroides ATCC 17025 YP_001167902Rhodobacter sphaeroides 2.4.1 YP_353192Rhodobacter sphaeroides ATCC 17029 YP_001043635
Azoarcus sp. EbN1 YP_159601Bordetella petrii DSM 12804 YP_001631825Mesorhizobium sp. BNC1 YP_675332Sinorhizobium meliloti 1021 NP_437488Sinorhizobium medicae WSM419 YP_001313492Pseudomonas stutzeri A1501 YP_001172366Pseudomonas mendocina ymP_YP_001187757Azoarcus sp. EbN1 YP_157109Azoarcus sp. BH72 YP_933261Nitrobacter winogradskyi Nb-255 YP_318920Parvibaculum lavamentivorans DS-1 YP_001411844
Rhodobacter sphaeroides ATCC 17025 YP_001169842Rhodobacter sphaeroides 2.4.1 YP_354614Rhodobacter sphaeroides ATCC 17029 YP_001045676
Rhodopseudomonas palustris HaA2 YP_483778Rhodopseudomonas palustris BisB18 YP_533702Rhodopseudomonas palustris BisA53 YP_782773
Herpetosiphon aurantiacus ATCC 23779 YP_001542885Roseiflexus sp. RS-1 YP_001276593Roseiflexus castenholzii DSM 13941 YP_001433624
Solibacter usitatus Ellin6076 YP_828774Symbiobacterium thermophilum IAM 14863 YP_075926Exiguobacterium sibiricum 255-15 YP_001814456
Bacillus halodurans C-125 NP_243480Bacillus clausii KSM-K16 YP_175888
Oceanobacillus iheyensis HTE831 NP_692359Lysinibacillus sphaericus C3-41 YP_001697134
Bacillus licheniformis ATCC 14580 YP_078884Bacillus licheniformis ATCC 14580 YP_091296Bacillus pumilus SAFR-032 YP_001486625Bacillus subtilis subsp. subtilis str. 168 NP_389373Bacillus amyloliquefaciens FZB42 YP_001421070
Geobacillus kaustophilus HTA426 YP_146936Geobacillus thermodenitrificans NG80-2 YP_001125071Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001375874Bacillus cereus ATCC 10987 NP_980285Bacillus cereus ATCC 14579 NP_833662Bacillus weihenstephanensis KBAB4 YP_001646566Bacillus anthracis str. Sterne YP_030105Bacillus cereus E33L YP_085284Bacillus thuringiensis str. Al Hakam YP_896311Bacillus thuringiensis serovar konkukian str. 97-27 YP_038005Bacillus anthracis str. Ames NP_846391Bacillus anthracis str. Ames Ancestor YP_020800
Lysinibacillus sphaericus C3-41 YP_001699583Oceanobacillus iheyensis HTE831 NP_693175Lysinibacillus sphaericus C3-41 YP_001698546
Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001373933Bacillus cereus ATCC 10987 NP_977096Bacillus cereus ATCC 14579 NP_830510Bacillus weihenstephanensis KBAB4 YP_001643510Bacillus cereus E33L YP_082219Bacillus thuringiensis str. Al Hakam YP_893531Bacillus anthracis str. Sterne YP_026945Bacillus thuringiensis serovar konkukian str. 97-27 YP_034958Bacillus anthracis str. Ames NP_843229Bacillus anthracis str. Ames Ancestor YP_017332Geobacillus kaustophilus HTA426 YP_149311Geobacillus thermodenitrificans NG80-2 YP_001127472
Bacillus halodurans C-125 NP_242931Bacillus clausii KSM-K16 YP_175632Listeria monocytogenes EGD-e NP_463547Listeria innocua Clip11262 NP_469361Listeria monocytogenes str. 4b F2365 YP_012629Listeria welshimeri serovar 6b str. SLCC5334 YP_848218
Bacillus subtilis subsp. subtilis str. 168 NP_391695Bacillus amyloliquefaciens FZB42 YP_001423102Bacillus pumilus SAFR-032 YP_001488673Bacillus licheniformis ATCC 14580 YP_081116Bacillus licheniformis ATCC 14580 YP_093545
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 YP_301821Staphylococcus haemolyticus JCSC1435 YP_253817Staphylococcus epidermidis ATCC 12228 NP_764313Staphylococcus epidermidis RP62A YP_188230Staphylococcus aureus subsp. aureus COL YP_185933Staphylococcus aureus subsp. aureus MW2 NP_645760Staphylococcus aureus RF122 YP_416411Staphylococcus aureus subsp. aureus USA300 YP_493660Staphylococcus aureus subsp. aureus NCTC 8325 YP_499553Staphylococcus aureus subsp. aureus USA300 TCH1516 YP_001574903Staphylococcus aureus subsp. aureus str. Newman YP_001331963Staphylococcus aureus subsp. aureus JH1 YP_001316283Staphylococcus aureus subsp. aureus Mu3 YP_001441642Staphylococcus aureus subsp. aureus JH9 YP_001246495Staphylococcus aureus subsp. aureus Mu50 NP_371584Staphylococcus aureus subsp. aureus N315 NP_374179Staphylococcus aureus subsp. aureus MSSA476 YP_043120Staphylococcus aureus subsp. aureus MRSA252 YP_040448
Acidiphilium cryptum JF-5 YP_001234229Candidatus Carsonella ruddii PV YP_802566
Candidatus Protochlamydia amoebophila UWE25 YP_008189Bartonella bacilliformis KC583 YP_989523Bartonella tribocorum CIP_105476 YP_001608617Bartonella henselae str. Houston-1 YP_032982Bartonella quintana str. Toulouse YP_031835
Nitrosomonas eutropha C91 YP_746933Mesorhizobium sp. BNC1 YP_676071
Nitrobacter winogradskyi Nb-255 YP_317387Nitrobacter hamburgensis X14 YP_578641
Legionella pneumophila str. Paris YP_122635Coxiella burnetii Dugway 5J108-111 YP_001424381Coxiella burnetii RSA 331 YP_001596689Coxiella burnetii RSA 493 NP_820041
Bradyrhizobium japonicum USDA 110 NP_769355Bradyrhizobium sp. ORS278 YP_001206809Bradyrhizobium sp. BTAi1 YP_001239191
Ochrobactrum anthropi ATCC 49188 YP_001368609Brucella melitensis 16M NP_540817Brucella ovis ATCC 25840 YP_001258090Brucella suis ATCC 23445 YP_001626723Brucella suis 1330 NP_697085Brucella canis ATCC 23365 YP_001591920Methylobacterium extorquens PA1 YP_001641776Methylobacterium radiotolerans JCM 2831 YP_001754410
Methylobacterium sp. 4-46 YP_001772457Silicibacter sp. TM1040 YP_614279
Rhizobium etli CFN 42 YP_472195Rhizobium leguminosarum bv. viciae 3841 YP_771074Agrobacterium tumefaciens str. C58 NP_353177
Sinorhizobium meliloti 1021 NP_437856Sinorhizobium medicae WSM419 YP_001313108Caulobacter crescentus CB15 NP_420580Alcanivorax borkumensis SK2 YP_693756
Methylibium petroleiphilum PM1 YP_001020937Bordetella parapertussis 12822 NP_883412Bordetella bronchiseptica RB50 NP_887855Bordetella pertussis Tohama I NP_881338Bordetella petrii DSM 12804 YP_001632007Ralstonia eutropha JMP134 YP_299083Ralstonia metallidurans CH34 YP_587737Ralstonia eutropha H16 YP_729182Acidovorax avenae subsp. citrulli AAC00-1 YP_970574Acidovorax sp. JS42 YP_986993Delftia acidovorans SPH-1 YP_001565074Herminiimonas arsenicoxydans YP_001100944Janthinobacterium sp. Marseille YP_001354329Mesorhizobium loti MAFF303099 NP_107274
Sphingopyxis alaskensis RB2256 YP_616553Paracoccus denitrificans PD1222 YP_918863
Azorhizobium caulinodans ORS 571 YP_001525015Bradyrhizobium japonicum USDA 110 NP_766790Rhodopseudomonas palustris HaA2 YP_483863Rhodopseudomonas palustris BisB5 YP_567735
Bradyrhizobium sp. ORS278 YP_001203834Bradyrhizobium sp. BTAi1 YP_001238127
Acinetobacter sp. ADP1 YP_047021Acinetobacter baumannii ATCC 17978 YP_001085196Acinetobacter baumannii SDF YP_001706978Acinetobacter baumannii AYE YP_001713301Francisella tularensis subsp. novicida U112 YP_897860Francisella tularensis subsp. holarctica YP_512987Francisella tularensis subsp. holarctica FTA YP_001427640Francisella tularensis subsp. holarctica OSU18 YP_762853Francisella tularensis subsp. tularensis FSC198 YP_666464Francisella tularensis subsp. tularensis SCHU S4 YP_169332Francisella tularensis subsp. tularensis WY96-3418 YP_001122595
Chromohalobacter salexigens DSM 3043 YP_573011Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_857449Aeromonas salmonicida subsp. salmonicida A449 YP_001142711Vibrio parahaemolyticus RIMD 2210633 NP_800138Vibrio harveyi ATCC BAA-1116 YP_001447623
Sodalis glossinidius str. morsitans YP_454346Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis NP_871151Baumannia cicadellinicola str. Hc Homalodisca coagulata YP_588718Candidatus Blochmannia floridanus NP_878541Candidatus Blochmannia pennsylvanicus str. BPEN YP_277755
Pectobacterium atrosepticum SCRI1043 YP_049248Photorhabdus luminescens subsp. laumondii TTO1 NP_931081Serratia proteamaculans 568 YP_001477321Yersinia enterocolitica subsp. enterocolitica 8081 YP_001007324Yersinia pestis Pestoides F YP_001164135Yersinia pseudotuberculosis IP_31758 YP_001402059Yersinia pestis KIM NP_668350Yersinia pestis Angola YP_001607427Yersinia pseudotuberculosis YPIII YP_001721964Yersinia pestis CO92 NP_406640Yersinia pestis biovar Microtus str. 91001 NP_992154Yersinia pseudotuberculosis IP_32953 YP_069492Yersinia pestis Antiqua YP_652566Yersinia pestis Nepal516 YP_646858
Buchnera aphidicola str. APS Acyrthosiphon pisum NP_240282Buchnera aphidicola str. Sg Schizaphis graminum NP_660787
Buchnera aphidicola str. BP_Baizongia pistaciae NP_778021Buchnera aphidicola str. Cc Cinara cedri YP_802843
Enterobacter sakazakii ATCC BAA-894 YP_001438936Citrobacter koseri ATCC BAA-895 YP_001454272Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334075Enterobacter sp. 638 YP_001175633Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001589333Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215471Salmonella typhimurium LT2 NP_459438Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_806148Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_455039Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151477Salmonella enterica subsp. arizonae serovar 62 YP_001571493Shigella boydii Sb227 YP_406866Escherichia coli O157 H7 EDL933 NP_286173Escherichia coli str. K-12 substr. MG1655 NP_414965Escherichia coli O157 H7 str. Sakai NP_308512Escherichia coli str. K12 substr. W3110 AP_001081Escherichia coli UTI89 YP_539487Shigella sonnei Ss046 YP_309425Escherichia coli CFT073 NP_752476Escherichia coli DH10B YP_001729337Escherichia coli SECEC SMS-3-5 YP_001742572Escherichia coli E24377A YP_001461617Escherichia coli HS YP_001457274Escherichia coli APEC O1 YP_851604Escherichia coli 536 YP_668419Pseudomonas fluorescens Pf-5 YP_261816Granulibacter bethesdensis CGDNIH1 YP_745096
Gluconobacter oxydans 621H YP_192306Gluconacetobacter diazotrophicus PAl 5 YP_001602279
Burkholderia vietnamiensis G4 YP_001120648Burkholderia thailandensis E264 YP_442319Burkholderia pseudomallei K96243 YP_108972Burkholderia pseudomallei 1106a YP_001067024Burkholderia pseudomallei 668 YP_001059739Burkholderia pseudomallei 1710b YP_334218Burkholderia mallei SAVP1 YP_993718Burkholderia mallei NCTC 10229 YP_001028824Burkholderia mallei NCTC 10247 YP_001081265
Burkholderia vietnamiensis G4 YP_001119810Burkholderia multivorans ATCC 17616 YP_001579395Burkholderia ambifaria AMMD YP_773996Burkholderia ambifaria MC40-6 YP_001808673Burkholderia sp. 383 YP_369613Burkholderia cenocepacia MC0-3 YP_001765372Burkholderia cenocepacia AU 1054 YP_625845Burkholderia cenocepacia HI2424 YP_835714Burkholderia xenovorans LB400 YP_553679
Burkholderia thailandensis E264 YP_438680Burkholderia pseudomallei 668 YP_001063707Burkholderia pseudomallei 1710b YP_336150Burkholderia pseudomallei K96243 YP_111902Burkholderia pseudomallei 1106a YP_001076601Burkholderia mallei SAVP1 YP_990966Burkholderia mallei ATCC 23344 YP_105022Burkholderia mallei NCTC 10229 YP_001025367Burkholderia mallei NCTC 10247 YP_001077431
Methylobacillus flagellatus KT YP_545403Bordetella petrii DSM 12804 YP_001631310Bordetella bronchiseptica RB50 NP_887830Bordetella parapertussis 12822 NP_883388Bordetella pertussis Tohama I NP_881514Ralstonia eutropha JMP134 YP_298772Ralstonia metallidurans CH34 YP_587920Ralstonia solanacearum GMI1000 NP_519980Ralstonia eutropha H16 YP_726142
Xylella fastidiosa 9a5c NP_298678Xylella fastidiosa Temecula1 NP_778846Xylella fastidiosa M12 YP_001775363Xanthomonas oryzae pv. oryzae KACC10331 YP_200269Xanthomonas oryzae pv. oryzae MAFF 311018 YP_450545Xanthomonas axonopodis pv. citri str. 306 NP_641594Xanthomonas campestris pv. vesicatoria str. 85-10 YP_363039Xanthomonas campestris pv. campestris str. ATCC 33913 NP_636534Xanthomonas campestris pv. campestris str. 8004 YP_244149
Ralstonia solanacearum GMI1000 NP_521037Ralstonia metallidurans CH34 YP_583104Ralstonia eutropha JMP134 YP_295206Ralstonia eutropha H16 YP_725581Pseudomonas aeruginosa PAO1 NP_250009Pseudomonas aeruginosa PA7 YP_001349426Pseudomonas aeruginosa UCBPP-PA14 YP_791927Pseudomonas putida W619 YP_001751224Pseudomonas entomophila L48 YP_606676Pseudomonas putida GB-1 YP_001667096Pseudomonas putida KT2440 NP_742974Pseudomonas putida F1 YP_001266182Pseudomonas fluorescens Pf-5 YP_262115Pseudomonas fluorescens PfO-1 YP_350375Pseudomonas syringae pv. tomato str. DC3000 NP_791153Pseudomonas syringae pv. syringae B728a YP_234234Pseudomonas syringae pv. phaseolicola 1448A YP_273477Chromobacterium violaceum ATCC 12472 NP_903665Marinomonas sp. MWYL1 YP_001338967Pseudoalteromonas haloplanktis TAC125 YP_340728Pseudoalteromonas atlantica T6c YP_660871Shewanella frigidimarina NCIMB 400 YP_748924Shewanella woodyi ATCC 51908 YP_001758825Shewanella loihica PV-4 YP_001092498Shewanella sp. W3-18-1 YP_961501Shewanella putrefaciens CN-32 YP_001185364Shewanella baltica OS185 YP_001368398Shewanella baltica OS195 YP_001556769Shewanella sp. ANA-3 YP_871655Shewanella sp. MR-7 YP_739949Shewanella sp. MR-4 YP_735944
Azoarcus sp. BH72 YP_934805
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746
999
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875
881
8251000
1000999
1000
193
86
1000
428
816
542
717589
999
565
165
997
434996
8281000
934
655109
806
469523
984
202
535
203
85
241
926
146
652
534
297
9
213
235
273
335
1000
1000
4057921000
1000
9371000
409
731
981
1000
676
1000
611
1000
10001000
947
880
9671000
5731000
629
10001000
993
925
835
5841000
607
10001000
9911000
368
999
991
599
1000
359
1000
969
1000878
1000
1000
996515
997
1000
381
593
419
593449
730
543
569
1000
771
706
571
398
729
955
801963
515
53496181
345979
1000
997
1000
8011331000
999
1000597
463
1000
159
219
285
343
368
614211
169
138
100
810
1000
838
1000
808
218
789
779
773851
100078
313
1000
855
7421000
998
9981000
4665026571000
1000
955
432
1000
999602
770
138
6921000
987938
473
759
351
971994
990
969607
910
956
574
818
625
817
220
196
383
235
407
166
731
181
56
5759871000
5557603813619351000
1000
1000
244
982853
750938
616
939130
724
982
818
317
95
1000
978
923
606
181
410
276
997
384
454
732716
432168103425490
628
150
2697364
71
34142
281
295
140
27
434
1000
569
968
910
142
375
246
80
1000
524982414457342
8879691000
796
508985263
88
401
794
521
753
825
48168644
993
859
826
924
948
785
389
6881000
957
571
972
1000
958
9781000
1000
998
999
693
998
995
478
109
7401000
560
7221000
631
799741
1000
1000
993998
535
1000
1000
1000
843997
762
556
573
524
899817
612
967374
775
998
109
78
57
51
20
94
43
30
29
106
447
999
1000
916
854
660
291
785
294
917
1000
632666
389
990503
90
426
773
252
195
4539921000
176
335401
300
483
638846
590
71213089696249926
737
969
675
355
817
849
10005351000
3563571000
601
8201000
828
797255365767
822
477
837
978
456
978
1000
999
805651965
1000
674
305
154
958477
344
9947691000
425
179166
65
195
285376
998
157161555
322
806
511
482
881
526
183
355
707
915
192
344
448
734
341
198
334
1000
221
Crenarchaeota(Desulfurococcales)(Sulfolobales)(Thermoproteales)
Euryarchaeota(Thermoplasmatales)(Halobacteriales)
Thaumarchaeota
Deinococci/thermus
Aquificales
Delta-ProteobacteriaGamma-ProteobacteriaBeta-ProteobacteriaAlpha-ProteobacteriaBacteroidetes/ChlorobiAcidobacteriaChloroflexiPVC
Cyanobacteria
Proteobacteria IIBacteroidetes/ChlorobiAlpha-ProteobacteriaBeta-proteobacteriaGamma-ProteobacteriaAcidobacteriaDelta-proteobacteria
Alpha-Proteobacteria
Beta-Proteobacteria
Gamma-Proteobacteria
Proteobacteria I(Gamma-Proteobacteria)(Beta-Proteobacteria)(Alpha-Proteobacteria)(PVC)
Firmicutes I
Firmicutes II
CloroflexiAcidobacteria
Proteobacteria IIIGamma-ProteobacteriaBeta-ProteobacteriaAlpha-ProteobacteriaAcidobacteriaPVC
Actinobacteria
Suppl. Mat. 5
Suppl. Mat. 6
760
1000
0.1
Arcobacter butzleri RM4018 YP_001490279
Sulfolobus solfataricus P2 NP_342994
Caldivirga maquilingensis IC-167 YP_001540124
Pyrobaculum arsenaticum DSM 13514 YP_001152749
Pyrobaculum aerophilum str. IM2 NP_560853
Pyrobaculum calidifontis JCM 11548 YP_001056790
Desulfitobacterium hafniense Y51 YP_517398
Methylococcus capsulatus str. Bath YP_114815
Nitratiruptor sp. SB155-2 YP_001357257
Sulfurimonas denitrificans DSM 1251 YP_394493
Sulfurovum sp. NBC37-1 YP_001357561
Anaeromyxobacter sp. Fw109-5 YP_001379942
Bdellovibrio bacteriovorus HD100 NP_969401
Nitrosospira multiformis ATCC 25196 YP_411950
Thiobacillus denitrificans ATCC 25259 YP_314581
Acidovorax sp. JS42 YP_987627
Shewanella denitrificans OS217 YP_562986
Magnetococcus sp. MC-1 YP_864053
Leptothrix cholodnii SP-6 YP_001790501
Azoarcus sp. BH72 YP_934592
Dechloromonas aromatica RCB YP_286391
Azoarcus sp. EbN1 YP_157126Thiobacillus denitrificans ATCC 25259 YP_314319
Photobacterium profundum SS9 YP_132726
Colwellia psychrerythraea 34H YP_267351
Hahella chejuensis KCTC 2396 YP_435539
Marinobacter aquaeolei VT8 YP_960376
Pseudomonas stutzeri A1501 YP_001173991
Bordetella petrii DSM 12804 YP_001632665
Pseudomonas aeruginosa UCBPP-PA14 YP_788694
Pseudomonas aeruginosa PAO1 NP_249215
Pseudomonas aeruginosa PA7 YP_001346020
155
Alkalilimnicola ehrlichei MLHE-1 YP_742950
Nitrosococcus oceani ATCC 19707 YP_343846
Nitrosomonas europaea ATCC 19718 NP_842019
Nitrosomonas eutropha C91 YP_746761
Paracoccus denitrificans PD1222 YP_916266
Rhodobacter sphaeroides ATCC 17025 YP_001167177
Rhodobacter sphaeroides 2.4.1 YP_353400
Rhodobacter sphaeroides ATCC 17029 YP_001043844
Roseobacter denitrificans OCh 114 YP_681875
Silicibacter pomeroyi DSS-3 YP_165045
Dinoroseobacter shibae DFL 12 YP_001534518
Magnetospirillum magneticum AMB-1 YP_422307
Rhizobium etli CFN 42 YP_473132
Sinorhizobium meliloti 1021 NP_435940
Sinorhizobium medicae WSM419 YP_001314819
Agrobacterium tumefaciens str. C58 NP_356267
Rhodopseudomonas palustris CGA009 NP_946806
Rhodopseudomonas palustris BisA53 YP_779559
Bradyrhizobium japonicum USDA 110 NP_769855
Bradyrhizobium sp. ORS278 YP_001203888
Bradyrhizobium sp. BTAi1 YP_001238182991999
886
Ochrobactrum anthropi ATCC 49188 YP_001372916
Brucella abortus biovar 1 str. 9-941 YP_223677
Brucella melitensis biovar Abortus 2308 YP_419097715
Brucella melitensis 16M NP_541976
Brucella suis 1330 NP_699446
Brucella canis ATCC 23365 YP_001594211
Brucella suis ATCC 23445 YP_001622088716
536
999
979
531
978715
1000992
1000
5871000
891
393
542
793
228
120
801
980
614997
559
252
211
248
979
1000658
10001000
585498
481
999
711
966
886
333
1000
582
985
993
545
996
997
659
Legionella pneumophila str. Corby YP_001250986
Legionella pneumophila str. Paris YP_124501
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_096248
Legionella pneumophila str. Lens YP_1274976425331000
Burkholderia thailandensis E264 YP_439142
Burkholderia pseudomallei 668 YP_001063055
Burkholderia pseudomallei 1106a YP_001075999768 Burkholderia mallei NCTC 10247 YP_001078795
Burkholderia mallei NCTC 10229 YP_001024473
Burkholderia mallei ATCC 23344 YP_105512
Burkholderia mallei SAVP1 YP_990155865227
999
1000
1000
Haloarcula marismortui ATCC 43049 YP_136806
Halorubrum lacusprofundi ATCC 49239 ZP_020152451000
Staphylococcus aureus subsp. aureus MRSA252 YP_039724
Bacillus licheniformis ATCC 14580 YP_079248
Bacillus licheniformis ATCC 14580 YP_0916671000
Geobacillus kaustophilus HTA426 YP_146611
Geobacillus thermodenitrificans NG80-2 YP_001124768996
999
1000
Geobacter metallireducens GS-15 YP_386423
Anaeromyxobacter dehalogenans 2CP-C YP_466383
Sorangium cellulosum So ce 56 YP_001619234861
Propionibacterium acnes KPA171202 YP_056649
Mycobacterium avium subsp. paratuberculosis K-10 NP_962115
Mycobacterium avium 104 YP_8831641000
Mycobacterium sp. KMS YP_937591
Mycobacterium sp. JLS YP_001069828
Mycobacterium sp. MCS YP_6387368531000
779
998
1000
957
Syntrophobacter fumaroxidans MPOB YP_847042
Anaeromyxobacter dehalogenans 2CP-C YP_464614
Anaeromyxobacter sp. Fw109-5 YP_0013796121000833
Synechocystis sp. PCC 6803 NP_442983
Acaryochloris marina MBIC11017 YP_001514849
Acaryochloris marina MBIC11017 YP_0015207989981000
Sorangium cellulosum So ce 56 YP_001613920
Campylobacter curvus 525.92 YP_001407973
Campylobacter concisus 13826 YP_0014664131000
Mannheimia succiniciproducens MBEL55E YP_087486
Actinobacillus succinogenes 130Z YP_0013448911000
Neisseria gonorrhoeae FA 1090 YP_208344
Neisseria meningitidis MC58 NP_274628
Neisseria meningitidis 053442 YP_001599647
Neisseria meningitidis Z2491 NP_284596
Neisseria meningitidis FAM18 YP_975519350
657871
1000
947
Psychrobacter sp. PRwf-1 YP_001280413
Acidovorax sp. JS42 YP_984423
Herminiimonas arsenicoxydans YP_001098413
Sphingomonas wittichii RW1 YP_001265090906232
Hahella chejuensis KCTC 2396 YP_432036
Idiomarina loihiensis L2TR YP_154578
Pseudoalteromonas haloplanktis TAC125 YP_340908951403
Bordetella petrii DSM 12804 YP_001632171
Ralstonia metallidurans CH34 YP_585308
Ralstonia eutropha H16 NP_942879
Ralstonia eutropha JMP134 YP_299247
Ralstonia eutropha H16 YP_841835775977
854
811
440
536
531
363
1000
925
Flavobacterium johnsoniae UW101 YP_001194759
Corynebacterium diphtheriae NCTC 13129 NP_940552
Solibacter usitatus Ellin6076 YP_824206530156
Acidobacteria bacterium Ellin345 YP_589443
Anaeromyxobacter dehalogenans 2CP-C YP_466923
Anaeromyxobacter sp. Fw109-5 YP_0013810111000354
338
Xanthobacter autotrophicus Py2 YP_001417931
Sphingomonas wittichii RW1 YP_001260078
Parvibaculum lavamentivorans DS-1 YP_001412284997590
Shewanella amazonensis SB2B YP_926606
Shewanella loihica PV-4 YP_001092788
Shewanella sediminis HAW-EB3 YP_001475554
Shewanella woodyi ATCC 51908 YP_001759151
Shewanella halifaxensis HAW-EB4 YP_001675756531229
Shewanella frigidimarina NCIMB 400 YP_751928
Shewanella sp. W3-18-1 YP_962277
Shewanella putrefaciens CN-32 YP_0011845841000
Shewanella sp. MR-7 YP_736939
Shewanella sp. ANA-3 YP_868490
Shewanella sp. MR-4 YP_735217666546
881
247
340
348
1000
Rhodoferax ferrireducens T118 YP_523143
Herminiimonas arsenicoxydans YP_001099949
Polaromonas naphthalenivorans CJ2 YP_9815649971000
Ralstonia solanacearum GMI1000 NP_523064
Chromobacterium violaceum ATCC 12472 NP_903164
Burkholderia thailandensis E264 YP_442345
Burkholderia pseudomallei 668 YP_001059704
Burkholderia pseudomallei 1710b YP_334186766
Burkholderia pseudomallei 1106a YP_001066989
Burkholderia pseudomallei K96243 YP_108946391
Burkholderia mallei NCTC 10229 YP_001028854
Burkholderia mallei NCTC 10247 YP_001081235468
Burkholderia mallei SAVP1 YP_993685
Burkholderia mallei ATCC 23344 YP_102415869
551
377
972
1000
704
1000
460
448
988
1000
935
968
520
708
988
997
1000
0.1
Arcobacter butzleri RM4018 YP_001490279
Crenarchaeota (Archaea)Desulfitobacterium hafniense
1000
993
545
996
659
Haloarcula marismortui ATCC 43049Halorubrum lacusprofundi ATCC 492391000
620
1000
935
968
520
708
1000
Epsilon ProteobacteriaGamma Proteobacteria
Delta ProteobacteriaBeta Proteobacteria
979
Gamma ProteobacteriaBeta Proteobacteria
985
Gamma ProteobacteriaBeta ProteobacteriaAlpha Proteobacteria
Gamma ProteobacteriaBeta Proteobacteria
Firmicutes
957
Delta ProteobacteriaActinobacteria
972
Delta ProteobacteriaCyanobacteria
925
Delta ProteobacteriaEpsilon ProteobacteriaGamma ProteobacteriaAlpha ProteobacteriaBeta Proteobacteria
BacteroidetesActinobacteriaAcidobacteriaDelta ProteobacteriaGamma ProteobacteriaAlpha ProteobacteriaBeta Proteobacteria
A B
ARCHAEA
BACTERIA
Bacteroidetes/Chlorobi (1/17)
Aquificales (0/1)Thermotogales (0/6)
Acidobacteria (2/2)
Crenarchaeota (5/15)+Korarchaeota (0/1)
Euryarchaeota (2/35)+Nanoarchaeota (0/1)
Deinococcus/Thermus (0/4)Chloroflexii (0/7)
Cyanobacteria (2/32)
Firmicutes (6/144)
Actinobacteria (7/50)
Spirochaetes (0/9)
PVC (0/15)
Epsilon-Proteobacteria (6/19)
Delta-Proteobacteria (6/19)
Alpha-Proteobacteria (28/83)
Beta-Proteobacteria (32/53)Gamma-Proteobacteria
(32/157)
Thaumarchaeota (0/2)
Fusobacteria (0/1)
C
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