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BACTERIAL GENOME ANNOTATION
SERVICE
www.era7bioinformatics.com
Specifically designed for data
Our service highlights
Based on
www.era7bioinformatics.com
So it’s and
It’s according to our customer needs
specifically designed for data
www.era7bioinformatics.com
specifically designed for data
www.era7bioinformatics.com
specifically designed for data
www.era7bioinformatics.com
specifically designed for data
www.era7bioinformatics.com
specifically designed for data
Error-tolerant system
It can handle sequencing errors that may cause:
www.era7bioinformatics.com
Indels, Frameshifts, Base substitution
specifically designed for data
Error-tolerant system
It can handle sequencing errors that may cause:
www.era7bioinformatics.com
Works with
Large number of contigs: There’s no need to have the genome closed
Large Bacterial Genomes: Up to 7Mb genomes annotated successfully
Indels, Frameshifts, Base substitution
We use
So our service is
In 24 hours you can have your bacterial genome analyzed
www.era7bioinformatics.com
In 24 hours you can have your bacterial genome analyzed
We use
So our service is
In 24 hours you can have your bacterial genome analyzed
www.era7bioinformatics.com
In 24 hours you can have your bacterial genome analyzed
and
whether you need to annotate 1 genome or 100 we can handle it
It’s
The annotation can be focused on particular aspects you may be interested in:
www.era7bioinformatics.com
may be interested in:
The presence of a particular enzime activity
Resistance to antibiotics
Mobile elements…
annotation
The annotation system is based on the latest releases of
www.era7bioinformatics.com
Uniprot and GenBank databases
So you’ll get an up to date annotation
www.era7bioinformatics.com
Sequencing data
www.era7bioinformatics.com
Sequencing data
Sequencing data
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Sequencing data
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
Sequencing data
Manual selection by an expert in bacterial
genomics
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
Sequencing data
Manual selection by an expert in bacterial
genomics
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
BG7
Sequencing data
Preliminaryresults
Manual selection by an expert in bacterial
genomics
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
BG7
Sequencing data
Preliminaryresults
Manual selection by an expert in bacterial
genomics
AutomatedQC Tests
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
BG7Results
Passing QC tests
Sequencing data
Preliminaryresults
Manual selection by an expert in bacterial
genomics
AutomatedQC Tests
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
BG7Results
Passing QC tests
Definitiveresults
Sequencing data
Preliminaryresults
Manual selection by an expert in bacterial
genomics
AutomatedQC Tests
An expert in
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
Reference Proteinsand RNAs
genomics
BG7Results
Passing QC tests
Definitiveresults
An expert in Bacterial genomics checks that everything is
OK
Sequencing data
Preliminaryresults
Manual selection by an expert in bacterial
genomics
AutomatedQC Tests
An expert in
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
24 hrReference Proteinsand RNAs
genomics
BG7Results
Passing QC tests
Definitiveresults
An expert in Bacterial genomics checks that everything is
OK
AutomatedQC Tests
Sequencing data
Preliminaryresults
An expert in
Manual selection by an expert in bacterial
genomics
www.era7bioinformatics.com
Sequencing data
Info about yourproject, your needs
24 hrReference Proteinsand RNAs
BG7Results
Passing QC tests
Definitiveresults
An expert in Bacterial genomics checks that everything is
OK
genomics
BG7 System
Input contigs (nt)A
B
C
www.era7bioinformatics.com
Input contigs (nt)A
B
C
A B C
BG7 System
www.era7bioinformatics.com
Input contigs translated into the 6 reading frames (aa)
Input contigs (nt)A
B
C
A B C
BG7 System
www.era7bioinformatics.com
Input contigs translated into the 6 reading frames (aa)
Reference Proteins (aa)
Input contigs (nt)A
B
C
A B C
BG7 System
www.era7bioinformatics.com
Input contigs translated into the 6 reading frames (aa)
Reference Proteins (aa)are searched in the translated contigs
Genes are defined based on sequencesimilarity to proteins
BG7 System
www.era7bioinformatics.com
A
B
C
Genes are defined based on sequencesimilarity to proteins
BG7 System
www.era7bioinformatics.com
A
B
C
RNAs and then searched for in the contigsand annotated
Genes are defined based on sequencesimilarity to proteins
BG7 System
www.era7bioinformatics.com
A
B
C
RNAs and then searched for in the contigsand annotated
Genes are defined based on sequencesimilarity to proteins
BG7 System
www.era7bioinformatics.com
A
B
C
What would you get at the end?
A Fast and Accurate genome annotation rich in functional data: GO, Interpro…
Deliverables in several formats:
www.era7bioinformatics.com
Deliverables in several formats:
XML, GenBank, GFF, Fasta, .xls (Excel), .doc (Word), .txt
An user friendly annotation viewer
And some important things to know:
Working with us means
No IP over the results, they’re all yours
CDA
Bill by project
www.era7bioinformatics.com
Bill by project
Of course, there are other ways…
research collaboration
Follow us on:
eduardopareja marina_manrique rtobes
Eduardo Pareja Marina Manrique Raquel Tobes
www.era7bioinformatics.com
Marina Manrique Raquel Tobes
Join our NGS group at LinkedIn
epareja@era7.com
rtobes@era7.com
mmanrique@era7.com
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