4
1 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for a polymer chain as, R 2 = r i ir j j =1 z i =1 z a) For a Cartesian coordinate system what values can r i ir j have? What is a necessary condition for r i ir j to have a value? b) In order to understand the result of double summations of this type a 2-d matrix (i vs. j) of values of the argument, r i ir j , for the various i and j combinations are often constructed. For a straight line of z units show that <R 2 > = z 2 l 2 using this summation and the values of r i ir j by constructing a matrix of r i ir j values for z = 4. c) For alternating direction steps construct a matrix of r i ir j values and calculate <R 2 >. d) The square end-to-end vector R 2 can be calculated by summing the vector steps taken in each of the 3 directions, x, y and z, and calculating the sum of the squares of the Cartesian sums, R 2 = r xi i =1 z 2 + r yi i =1 z 2 + r zi i =1 z 2 . Using your answer to a) show that the dot product is equivalent to this expression, that is, show that r i ir j j =1 z i =1 z = r xi i =1 z 2 + r yi i =1 z 2 + r zi i =1 z 2 . e) Show that this summation is equal to zl 2 for a random walk. 2) The Gaussian function describes the distribution of chain end-to-end distances for random walks. a) Sketch a plot of the 1d Gaussian function. b) Give the Gaussian function. c) Indicate what part of the Gaussian function indicates that it is symmetric and what part indicates that it is a monotonically decaying function. d) The scaled exponential function is often used to describe non-random systems, P( R) = K exp β R α ( ) , where β is a constant and α is usually a non-integer larger than 2. Is this a symmetric function? e) An average projection of 3-d random walks in 1d results in the same value for σ 2 as the full 3d analysis, that is σ 2 = zl 2 . In a 3-d random walk on a Cartesian lattice only 1/3 of the random walk steps occur in any one direction. Use the proposition that random placement of the no-step option does not alter a random walk to explain this. 3) a) Describe the difference between short range interactions and long range interactions. b) What is the effect of short range interactions on chain scaling? c) Demonstrate your answer to b) by calculating the end to end distance for a walk with no back steps as done in class.

100115 Quiz 2 Polymer Propertiesbeaucag/Classes/Properties/Quizzes... · 2010-02-10 · 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for

  • Upload
    others

  • View
    2

  • Download
    0

Embed Size (px)

Citation preview

Page 1: 100115 Quiz 2 Polymer Propertiesbeaucag/Classes/Properties/Quizzes... · 2010-02-10 · 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for

  1  

100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for a polymer chain as,

R2 = ri irj

j=1

z

∑i=1

z

a) For a Cartesian coordinate system what values can ri irj have? What is a necessary condition for ri irj to have a value?

b) In order to understand the result of double summations of this type a 2-d matrix (i vs. j) of values of the argument, ri irj , for the various i and j combinations are often constructed. For a straight line of z units show that <R2> = z2l2 using this summation and the values of

ri irj by constructing a matrix of ri irj values for z = 4. c) For alternating direction steps construct a matrix of ri irj values and calculate <R2>. d) The square end-to-end vector R2 can be calculated by summing the vector steps taken in

each of the 3 directions, x, y and z, and calculating the sum of the squares of the

Cartesian sums, R2 = rxii=1

z

∑⎛⎝⎜⎞⎠⎟

2

+ ryii=1

z

∑⎛⎝⎜⎞⎠⎟

2

+ rzii=1

z

∑⎛⎝⎜⎞⎠⎟

2

. Using your answer to a) show

that the dot product is equivalent to this expression, that is, show that

ri irj

j=1

z

∑i=1

z

∑ = rxii=1

z

∑⎛⎝⎜⎞⎠⎟

2

+ ryii=1

z

∑⎛⎝⎜⎞⎠⎟

2

+ rzii=1

z

∑⎛⎝⎜⎞⎠⎟

2

.

e) Show that this summation is equal to zl2 for a random walk.

2) The Gaussian function describes the distribution of chain end-to-end distances for random walks. a) Sketch a plot of the 1d Gaussian function. b) Give the Gaussian function. c) Indicate what part of the Gaussian function indicates that it is symmetric and what part

indicates that it is a monotonically decaying function. d) The scaled exponential function is often used to describe non-random systems,

P(R) = K exp −βRα( ) , where β is a constant and α is usually a non-integer larger than 2. Is this a symmetric function?

e) An average projection of 3-d random walks in 1d results in the same value for σ2 as the full 3d analysis, that is σ2 = zl2. In a 3-d random walk on a Cartesian lattice only 1/3 of the random walk steps occur in any one direction. Use the proposition that random placement of the no-step option does not alter a random walk to explain this.

3) a) Describe the difference between short range interactions and long range interactions.

b) What is the effect of short range interactions on chain scaling? c) Demonstrate your answer to b) by calculating the end to end distance for a walk with no

back steps as done in class.

Page 2: 100115 Quiz 2 Polymer Propertiesbeaucag/Classes/Properties/Quizzes... · 2010-02-10 · 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for

  2  

Answers 100115 Quiz 2 Polymer Properties 1)

a) For a Cartesian coordinate system ri irj can be + l2 when ri is in the same direction as rj; - l2 when they are in the opposite directions; and 0 when rj is orthogonal to ri.

Page 3: 100115 Quiz 2 Polymer Propertiesbeaucag/Classes/Properties/Quizzes... · 2010-02-10 · 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for

  3  

2)

e) The orthogonal steps, that is, y & z steps for a walk in the x direction, act like non-steps

and do not perturb the walk length in the x direction, that is, it has the same R2 value.

Page 4: 100115 Quiz 2 Polymer Propertiesbeaucag/Classes/Properties/Quizzes... · 2010-02-10 · 100115 Quiz 2 Polymer Properties 1) In class we defined the mean square end-to-end vector for

  4  

3) a) Short range interactions are interactions between chain units that are separated by small

differences in chain index such as bond rotation restrictions, charge effects in polyelectrolytes and local steric interactions. Long range interactions are interactions between chain units that are separated by large differences in chain index, primarily the excluded volume interaction.

b) Short range interactions do not effect chain scaling. They increase the Kuhn step length and the persistence length.

c)

From Masao Doi “Introduction to Polymer Physics”