3 Selected Reactions

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    TapioNevalainen

    DrugSynthesisII

    2011

    Se ecte organic reactions

    Crosscoupling reactions

    Coupling reaction between aryl halides with copper (Ullmann reaction)

    The Ullmann reaction is limited to electron deficient aryl halides and

    requires harsh reaction conditions. Reaction is replaced by palladium

    coupling reactions such as the Suzuki, Heck, Stille, Sonogashira reactions.

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    Crosscoupling reactions

    AkiraSuzuki,Eiichi Negishi andRichardHecksharetheNobelPrizeinChemistry2010forpalladiumcatalyzedcrosscouplingsin

    8.2.2011Selected organic reactions / Tapio Nevalainen 3

    More information:

    http://static.nobelprize.org/nobel_prizes/chemistry/laureates/2010/Sciback_2010.pdf

    PalladiumCatalyzedCouplingReactions

    Pd0 catal stXR + M R' R'R

    R, R' = aryl, vinyl

    X = Br, I, OTf

    M = B SuzukiSn StilleSi HiyamaZn Negishi

    Mg Kumada

    0

    XAr R'+base

    R'Ar

    Heck reaction

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    Generalizedmechanism

    for

    palladium

    catalyzedcrosscouplingreactions

    Mechanism oftheHeck reaction

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    Palladiumcouplingreactions: SuzukiCoupling

    PalladiumPalladium--catalysed cross coupling between organoboronic acid andcatalysed cross coupling between organoboronic acid and

    halideshalides

    Exam le: S nthesisS nthesis ofof losartanlosartan (( .. OrOr .. ChemChem. 1994,59, 8151. 1994,59, 8151--8156)8156)

    Alkyls, alkenyls and alkynyls can also be used as a reaction partners . PotassiumAlkyls, alkenyls and alkynyls can also be used as a reaction partners . Potassium

    trifluoroborates and organoboranes or boronate esters may be used in place oftrifluoroborates and organoboranes or boronate esters may be used in place of

    boronic acids. Triflates (CFboronic acids. Triflates (CF33SOSO33--)) may also be used as coupling partnersmay also be used as coupling partners.

    Heckreaction

    The palladium-catalyzed C-C coupling between aryl halides or vinyl

    halides and activated alkenes in the presence of a base

    Example: Heck reaction of phenylbromides with (S)-N-acroyl-4-phenyl-2-oxazolidinone

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    Theuse ofanintermolecular Heck reaction inthe

    commercial synthesis ofmontelukast

    (selective leukotriene receptor antagonist forthetreatment ofasthma)

    O

    CH3

    NCl

    HOCH2

    O

    O

    I

    +

    NCl

    HO

    O

    PdH I

    Ln

    Pd(OAc)2Et2N, MeCN, 85C

    O

    O

    Top. Organomet. Chem. 2004, 7, 81 203

    NCl

    SCH

    3

    Montelukast (Singulair)

    NCl

    O HOOC

    StilleCoupling C-C bond forming reaction between stannanes and halides or

    pseudohalides, with very few limitations on the R-groups

    R' '[Pd]R + SnBu3

    RBase

    +

    J. Am. Chem. Soc., 1984, 106, 4630.

    [Pd] = Pd(PPh3)4, PhCH2(PPh3)2ClR1 = alkynyl, alkenyl, aryl, allyl, benzyl, alkyl, acylR2 = alkenyl, allyl, benzyl, aryl, alkynylX = Cl, Br, I , OAc, OSO2CF3

    XSnBu3

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    TheSonogashirareaction

    TheSonogashirareactionconsistsofthepalladiumcatalysedcouplingofcopperacetylidesandarylhalogenidestoyieldalkynylarenes(K.Sonogashira,Y.TohdaandN.Hagihara,TetrahedronLett.,1975,44674470)

    X

    + R RPd-catalyst

    Example: 2,4-Diamino-5-(2',5'-substituted benzyl)pyrimidines (J.(J. MedMed.. ChemChem., 47 (6), 1475., 47 (6), 1475--1486, 2004)1486, 2004)

    -

    Crosscouplingreactions NegishiCoupling

    KumadaCoupling

    HiyamaCoupling

    R1

    X +

    MgX

    R2

    R1

    R2[Kat] [Kat] = Pd(PPh3)4 or Ni(dppb)Cl2

    R1 = aryl, vinyl

    R2 = aryl, vinyl, alkylX = Cl > Br > I

    Kumada. Bull. Chem. Soc. Jpn., 1976, 1958.

    FukuyamaCoupling

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    Mitsunobureaction The Mitsunobu reaction allows the conversion of primary and

    secondary alcohols to esters, phenyl ethers, thioethers and variousother compounds. The nucleophile employed should be acidic.

    Mitsunobu,O.;Wada,M.;Sano,T.J.Am.Chem.Soc. 1972,94,679;

    Mitsunobu,O.Synthesis.1981,128.Hughes,D.L.Org.Reac. 1992,42,335656.

    Mitsunobureaction:Mechanism

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    Mitsunobureaction Inversion of configuration in the Mitsunobu reaction

    Example 1:Example 1: Synthesis of MGLSynthesis of MGL--inhibitor Ninhibitor N--Arachidonyl MaleimideArachidonyl Maleimide

    xamp e : ro e n yros ne p osp a ase n orsxamp e : ro e n yros ne p osp a ase n ors

    TheWittigReaction (GeorgWittig,NobelPrizein1979)TheWittigReactionallowsthepreparationofanalkenebythe

    reactionofanaldehydeorketonewiththeylidegeneratedfromaphosphoniumsalt

    PhPh Ph

    Ph Ph

    oxaphosphetane

    P+

    H R'

    HBase P+

    H R'

    P

    H R'

    RO

    HP+

    H

    R'

    Ph

    Ph

    Ph +R

    R'

    P

    O

    Ph PhPh

    +Ph3P+

    H

    R'H

    -O R

    P

    H

    R'H

    O R

    Ph

    PhPh

    erythro betaine

    ylidephosphorane

    tt greact ongoesma n yv at eeryt ro eta ne nterme ate,whichleadstotheZalkene

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    TheWittigReactionYlidesYlides thatthat possesspossess substituentsubstituent groupsgroups thatthat cancan undergoundergoconjugationconjugation soso as toas to stabilisestabilise thethe anionanion leadlead to theto the formationformation ofofEE--alkenesalkenes..

    TheThe SchlosserSchlosser modificationmodification.. TheThe erythroerythro betainebetaine cancan bebe convertedconverted totothethe threothreo betainebetaine usingusing phenyllithiumphenyllithium atat lowlow temperaturetemperature ((formingforming aabetainebetaine ylideylide)) followedfollowed byby HClHCl. Upon. Upon workupworkup thisthis leadsleads to theto the EE--alkenealkene.. ((SchlosserSchlosser, M.;, M.; ChristmannChristmann, K. F., K. F. AngewAngew.. ChemChem.. IntInt. Ed. Engl.. Ed. Engl.1966, 5, 126)1966, 5, 126)

    TheWittigReaction: TheWadsworthHornerEmmonsReaction

    Thereactionofaldehydesorketoneswithstabilizedphosphorusylides(phosphonatecarbanions)leadstoolefinswithexcellentEselectivity.

    ExampleExample:: SynthesisSynthesis ofof tropanetropane--likelike analoguesanalogues

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    TheWittigReaction:Synthesisofacrivastine

    (antihistamine)

    CH3

    CNNBr Br+

    CH3

    NBrNBr Li

    CH3

    CN

    BuLi

    CH3 CH3

    N

    N

    CH3

    BrNP+

    Ph

    Ph Ph

    N

    O

    CH3

    Br

    1. BuLi

    2.N O

    Wittig

    1

    H3O+

    t-BuOK

    OEt

    Acrivastine

    N

    N

    N

    NO

    H

    HN,N-dimetyyli-formamidi

    2. NaOH

    .

    Horner-Wadsworth-Emmons

    t-BuOK

    EtO2C

    HO2C

    JuliareactionTheadditionofaphenylsulfonylcarbaniontoan

    aldehydeorketoneleadstoalcohol,whichisesterifiedinsitu.Thereductiveeliminationleadsto(E)alkene.

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    Peterson reaction

    Preparation ofalkenes from silylcarbanions by acid orbaseinduced elimination.

    Sulfurcontainingreagents

    Thioacetals canactaseffectiveprotectinggroupsandcanbereducedbyRaneyNickeltoaffordthealkane.

    CoreySeebachReactionSeebachUmpolung (reversalofpolarity):

    carbonylgroupreactsasanelectrophileatcarbonwhichpolaritycanbereversedwhenthecarbonylgroupisconvertedintoathioacetal(dithiane).Acylprotoncanbeabstractedbynbutyllithiumtogenerate2lithio1,3dithiane,whichreactsasanucleophilewithe ec rop es ea y a esan ac c or es.

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    Fluorinatedpharmaceuticals

    Fluorinationagents

    Nucleophilic agents

    Electrophilic agents Reagents to introduce CF3 groups

    More information: http://www.scripps.edu/chem/baran/images/grpmtgpdf/Su_May_08.pdf

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    Fluorination

    agents

    RuppertPrakashtrimethyl(trifluoromethyl)silane

    Oxidation Chemistry

    TheSwernOxidation

    MechanismMechanism

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    OxidationChemistry

    CoreyKimOxidation

    allowoxidationabove25C

    The BaeyerThe Baeyer--Villiger OxidationVilliger Oxidation

    OxidationChemistry

    DessMartinOxidation: TheDessMartinPeriodinane(DMP),offersselectiveandverymildoxidationofalcoholstoaldehydesor

    ketones.

    OppenauerOppenauer OxidationOxidation

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    OxidationChemistry

    Oxone =potassiummonopersulfate(KHSO5)

    NefReaction:Theconversionofnitrocom oundsinto

    Org. Lett., 2003, 5, 1031-1034

    carbonyls

    Synth. Commun., 1998, 28, 3057-3064.

    R

    2

    R' R

    O

    R'

    1. NaHPO4, MeOH

    2. Oxone (0,7M H2O)

    ReducingAgents

    Selective Hydrogenations

    OH O

    O

    OHOH

    H2, Pd-C

    Ni40 C, 2 atm.

    NaBH4

    H2

    PtO2100C, 5 atm.

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    HydrideReducingAgents

    Lithium Aluminium Hydride (LiAlH4)

    One of the most powerful reductants, Highly flammable

    Sodium Borohydride (NaBH4)

    Reduce aldehydes and ketones in the presence of esters,

    reactions are carried out in protic solvents including H2O

    RC

    R'

    O-

    HRC

    R'

    OH+

    RC

    R'

    O H

    H

    B+

    H

    HHH

    B

    H

    HH

    -

    ReducingAgents

    SodiumBorohydrideCerium(III)Chloride(Luche

    O OH

    NaBH4

    (J.Am.Chem.Soc.,1981,103,54545459)

    Chemoselectivereductionofaketoneinthepresenceofamoreelectrophilicaldehyde

    O OH OH

    +

    97% 3%

    NaBH4

    CeCl3

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    ReducingAgents

    Sodium Cyanoborohydride (NaCNBH3)

    milder than NaBH4 atpH7

    atpH34:NaCNBH3 readily reduces aldehdyes andketones

    : 3 r r m n m n = groups this property isresponsible forits most important use reductive amination:

    HO N

    CH3

    H3C O

    CO2EtNH2HN

    N+ N

    H

    HN N

    NCH3

    H3C O

    CO2EtNaCNBH4

    EtO2C EtO2C

    ReducingAgents

    DIBALH,Diisobutylaluminiumhydride

    verywidelyusedreducingagentespeciallyforreducingesters

    esterscanbereducedtoeitherthealdehydeorthealcoholdependingonthestoichiometryandreactionconditions:

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    ReducingAgents

    DIBALH

    ,amides,isoneofthemostfrequentmeansofconvertingacarboxylicacidtoanaldehyde.

    ThereactionofWeinrebamideswithorganomagnesiumcompoundsleadstoketonesinhighyields,

    ReducingAgents

    MeerweinPonndorfVerleyReductionwithAl(OiPr)3

    thebyproductisacetone

    thereactionisreversible thereverseoxidationis

    knownastheOppenauerOxidation.

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    ReducingAgents: Borane

    BoraneBH3,isgasandunstabletobeisolated,butexistseitherasthedimerB2H6oraLewisacidLewisbasecomplexe.g.BH3 xTHForBH3 xMe2S

    y ro ora on o enes

    Mechanism:

    ReducingAgents:Borane

    Reduction of Carboxylic AcidsBorane is best reagent for selectively reducing carboxylic

    acids to alcohols in the presence of esters

    Reduction of Ketones and Enones

    Reduction of Amides

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    ReducingAgents

    RaneyNickel

    mostwidelyusedinthehydrogenolysisofCSbonds.

    alsousedinthehydrogenationofalkenesandalkynes.

    ro uce y rea ngn c e a um n uma oyw concentratedsodiumhydroxide

    2Al + 2NaOH + 6H2O 2Na[Al(OH)4] + 3H2

    ReducingAgents

    Clemmensen Reduction

    Aclassical method forcomplete reduction ofacarbonyl group (inketones andaldehydes).

    Wolff-Kishner Reduction

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    ReducingAgents

    Hydrogenation with

    Hydrogen and a H2 / PtCH3 H

    Transition Meta Cata yst

    Partial Reduction ofAlkynes

    Lindlar's catalyst (Pd-

    CH3 CH3

    CH3H

    a 3- s e moswidely used. The reaction is

    stereospecific giving onlythe synaddition product

    ReducingAgents

    Hydrogenolysis Benzylether andbenzyloxycarbonyl protectinggroupsare

    readilycleavedbyPd/C/H2 undermildandneutralconditions.

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    ReducingAgents

    Dissolving Metal Reductions (Sodium/Ammonia or Lithium/Ammonia) Regiospecific Enolate Formation

    OH OLi OBr

    BirchReduction:Partialreductionofaromaticrings

    CH3

    Li, NH3

    1 eq H2OCH3 CH3

    CH2

    Na, NH3

    EtOH

    Reduction of Alkynes to (E)-

    alkenes

    ReducingAgents:Bu3SnHFreeRadicalReductions

    with tributyltinhydride

    (Bu3SnH)

    AIBN undergoes thermal homolysis at 60 C to give nitrile-stabilized radicals that abstract the hydrogen atom from Bu

    3

    SnH.

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    ReducingAgents:Bu3

    SnHSynthesis of Corey lactone

    Carboncarbon bond formation using radicals

    Metathesis

    The 2005 Nobel Prize in ChemistryYves Chauvin, Robert H. Grubbs, Richard R. Schrock

    Mechanism

    Example: Ring-Closing Metathesis Reaction for Synthesis of

    Ru

    NN

    CH3

    H3C

    CH3

    CH3

    CH3

    CH3

    Cl

    Cl

    PCy3

    Grubbs second-generation catalyst