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Accelerating Drug Development through Automation Crystallization Workshop Milan, 7 th June 2018 Dr Edwin Aret Principal Scientist Solid State Chemistry

Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

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Page 1: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Accelerating Drug Development through Automation

Crystallization WorkshopMilan, 7th June 2018

Dr Edwin AretPrincipal Scientist Solid State Chemistry

Page 2: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Outline

• Alcami• Solid State Chemistry• Drug Development

• Process• Form Selection

• Case Studies

2

Page 3: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Welcome to Alcami

3

Launched 2016

Alcami is a world-class contract development and manufacturing organization (CDMO) headquartered in Durham, North Carolina. Alcami provides solutions tailored to small and mid-size pharmaceutical and biotechnology companies. With over 1,000 employees operating at seven sites in the United States and Europe, our combined capabilities include:

• API development and manufacturing• Solid state chemistry• Formulation development• Analytical development and testing services• Clinical and commercial finished dosage form manufacturing (oral solid dose and parenteral)• Packaging and stability services

Alcami offers an end-to-end outsourcing opportunity that can be integrated for a less fragmented and faster pathway for products through the clinic toward commercialization, as well as individualized development and manufacturing services.

Page 4: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Facilities Overview

4

Page 5: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Our Approach

5

Science & Technology Proven technical expertise for optimal right first time process

Speed through clinic and launch

Technical platforms to address unforeseen molecule constraints & minimize clinical delays

TrustRegulatory and Safety Expertise

Industry Leader in Innovation and Regulatory Changes

Multi-Facility Offerings for De-Risked Program and Scale Up Support

Easy-to-Work-WithSingle Program Manager Supported by Project Managers, Quality and Operations

Single Master Service Agreement Across All Service Offerings

Diversity>100 Early Stage Products in Portfolio

>50 Late Stage Products in Portfolio

>40 Commercial Products in Portfolio

Excellence in Stand Alone Program or Integrated End-to-End Offering

IntegrityService Offering Solutions Through Clinic to Launch

Dedicated to Navigating Companies To Success

Invest Back Into Sites- >$20M Annually

Industry Leading Full Service CDMO

>$200M Revenue/Annually

1000 Employees

7 Sites Globally

Page 6: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Solid State Chemistry

Analytical Services

6

Process Chemistry

• Crystallization Study – isolate and purify stable solids

• PhysChem Characterization – material identification, stability

• Solubility Determination – in production solvents and buffer solutions

• Salt Selection – suitable form selection, improve solubility

• Polymorph Study – find a form for further development, IP screens

• Process Development – range finding DoE, metastable zone width

• Particle Habit Engineering – control of particle size and shape

• Pre-formulation – dissolution rate, excipient compatibility

A Center of Excellence for Crystallization and Solid State Chemistry

Page 7: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Solid State Chemistry

Study of the PhysicoChemical and Mechanical Properties• Development Strategy• Risk Assessment • Target Product Profile

Development by combination of DoE, PCA and HTS • Route Scouting• Range Finding• Scale-up Optimization

7

Page 8: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Design of Experiments (DoE)

DoE provides an overview of the interaction of factors, without the need of testing all possible conditions

• Continuous factors• Temperature, concentration, addition rate, stoichiometry…• Choose any level / range

• Discrete factors• Reagent, catalyst, ligand, solvent…• Selection constrained by availability / existence

8

Page 9: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Principle Component Analysis (PCA)

• PCA allows conversion of discreet chemicals into continuous variables• e.g. solvents: polarity, polarizability, H-bonding

9

PC2

PC1

Page 10: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Combining DoE and PCA

• identify factors and set ranges• define solvent space• select responses• select HTS protocol• choose design

• model data• validate predictions

10

Page 11: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Drug Development

11

Page 12: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Process Development

12

2 ml 50ml

1 L450 L

Page 13: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

QC/QAReleaseDemo Batch

Typical Deliverables:-Proof of Concept-Use Test of Raw Mat.-Confirm Specs-Material for Ref. Standard

MedChemRoute Scouting

Process-Process R&D-Analytical R&D-Solid State R&D

GMP Scale Up

Analytical Val.

Typical Deliverables:-GMP Batch-Validated Methods-Qualified Reference-Validation Protocols-Validation Reports

Typical Deliverables:-CoA-TSE Statement-GMP Compliance-IMPD/IND Support

Typical Deliverables:-Fit Process-Fit Analytical Methods-Target Specs-Material for Analytical Val.

Process Development

Page 14: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

UnchainedLabs Automation

• dSPR (deck Screening Pressure Reactor)• Parallel screening 48 * 1 ml• Pressure ~5 bar / protected atmosphere• Controlled heating / cooling 10-150C, stirring• e.g. Hydrogenation, cat-screens

14

Page 15: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Technobis Crystal 16

• Process Chemistry• Parallel 16 * 1 ml• Stirring, heating-cooling -20 – 200C, turbidity• Selection process conditions• Metastable zone width• Seeding conditions, crystallization behavior

15

Page 16: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Conc

entr

atio

n

Temperature

nucleation curve is variable,determined by crystallization conditions

solubility curve is fixed

Cooling

MSZW data

Meta-stable Zone Width: determine the solubility in process solvent(s) at several temperatures.

Page 17: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Technobis Crystalline

• Process Chemistry• Parallel 8 * 5 ml• Stirring, heating-cooling -20 – 200C, turbidity, camera, particle size and shape• Selection process conditions• Metastable zone width• Seeding conditions, crystallization behavior

17

Page 18: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Crystalline PSD data

• Nucleation / crystal growth:

18

Page 19: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Crystal Habit

• Select crystallization conditions to avoid fines, platelets or needles • Control for good filtration behavior and consistent dissolution rate• Avoid solvent inclusion, amorphous content, agglomerates

improvedfiltration

improveddissolution

19

Page 20: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Process chemistry

• Parallel reactor systems• 1 Project Database; combined process conditions and (in-situ) analytics• MiniTab17 DoE software• Optimization, reproducibility, scalability

UnchainedLabsScreening Platform

Technobis Crystal16 / Crystalline16 x 2 ml / 8 x 8 ml

MT-MultiMax/ LabMax4 x 50 ml / 2 x 250 ml / 1-2 L

Temperature, pH, dosing, seeding

FBRM, turbidity, video, PSD

Filtration rate, drying time

Database

20ELN

Page 21: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

UnchainedLabs Automation

• Solid Dispenser• Dosing solids in well-plates or glass vials• 1 mg – 1 g

21

Page 22: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Parallel Screening

• Obtain an overview of the crystallization behavior• Produce one suitable form for the stage of development• Find and characterize as many forms as time/costs allows• Compare critical properties like solubility, stability, bioavailability

• Heating – cooling• Stirring / slurry• Hot-filtration• Anti-solvent addition• LC dilution• Crystallization

22

Page 23: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Protocol Form Selection

23

Page 24: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

High-Throughput Analytics

• Analytics:• Solids / solution prepared on deck• Avoid manual repetitive handling• Software integrated

• Use equipment measurement software• Data stored in one project folder

• (u)HPLC

• XRPD + imaging

24

Page 25: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Bruker D8 Discover High-Resolution High-Throughput XRPD

• four 96 well-plates auto-sampler• xyz-screening stage • specially designed optics • images before and after• crystallization plate = XRPD

sample holder• raw data analysis by Polysnap

and TOPAS• reduce 2 FTE weeks into 1 day

25

Page 26: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Form Selection

• High-throughput crystallization platform (400 exp./day)• Project Database; library, dosing, experimental conditions and analytics

UnchainedLabsProtégéSolid Dispense System

UnchainedLabsCM2Crystallization Platform

Technobis Crystal16 / Crystalline

Bruker D8 Discover HR-HTS XRPD

HPLC / UPLC

FT-IR, DSC, TGA, Microscopy…

Database

Report / raw data

26

Page 27: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Case Studies

27

Page 28: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Suzuki cross coupling

28

R1 X + B

OR

OR

R2R1 R2 + B

OR

OR

RO[Pd]

• C-C bond formation• Palladium catalyzed cross coupling reaction

Organic halide Organo boron

Page 29: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Suzuki cross coupling

# Type 1 2 3 4 5 6 7 8

ABase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

BBase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

CBase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

DBase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

EBase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

FBase Dipea K2CO3 CsCO3 Et3N Dipea K2CO3 CsCO3 Et3N

Solvent MeOH MeOH MeOH MeOH DMSO DMSO DMSO DMSO

29

Variables: solvent (4), base (4), temperature (2), time (2)Responses: conversion, reproducibility

Page 30: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Suzuki cross coupling

01020304050607080

90

100

Conv

ersio

n[%

] / σ σ DMSO

σ IPAσ Ethanolσ MethanolDMSOIPAEthanolMethanol

65°C90°C

65°C16 hours24 hours 90°C

30

Methanol, inorganic base, 90°C, 24h -> best reaction condition for scaling up

Page 31: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

MSZW data

• ACN is used as process solvent, poor nucleation control• Other solvent? Anti-solvent?

31

Page 32: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

MSZW data

Cooling Crystallization Seeding

Crystalline: Compound oils out, solidifies and clusters of needles grow from it. Seeding gives block-shaped crystals.

• Other solvents: not soluble or solvates• Anti-solvent: oiling out• Seeding?

Page 33: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Filtration issues

• Material showed filtration issues• Isolated using DMSO or DMSO/water• Small particles; fines < 20µm

• Recrystallization experiments new polymorph• Isolated using DMSO/methanol, good filtration

• Advantages new form• Improved filtration• Thermodynamically more stable • Less hygroscopic

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Page 34: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Filtration issues

Reaction mixture DMSO Reaction mixture DMSO/MeOH (1/1)

34

Page 35: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Case Study - solvent

• Solubility determination for recrystallization

35

Solvent PCA Solubility (mg/ml) USP classification

2-ethyl-1-butanol 0 0 0 < 0.1 Practically insoluble2-butanol -1 -1 -1 0.1-1 Very slightly solubleMethanol -1 -1 1 1-11 Slightly solubleWater -1 -1 1 < 0.1 Practically insolubleDimethylsulfoxide -1 1 -1 0.8-11 Slightly solubleethyl salicylate -1 1 1 < 0.1 Practically insolubleethyl acetate 1 -1 -1 0.1-1 Very slightly solublen-heptane 1 -1 1 < 0.1 Practically insolubleAnisole 1 1 -1 0.1-1 Very slightly solubleCyclohexane 1 1 1 < 0.1 Practically insoluble

1

2

3

4

56

7

89

10

11

12

13

14

15

1617 18

19

20

21

22

23

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3334

35

36

37

38

3940

4142

43

44

45

46

47

48

4950

51

52

53

54

55

56

5758

59

60

61626364

65

66

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68

69

70 71

72

73

74

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76

77

78

79

80

81

82

83

84

85

86

87

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89

90

9192

93

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96

97

9899

100 101

102

103

104

105106

107

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109

110111

112

113

114

115

116

117

118

119

120

121122

123

124

125

126

127

128

129

130

131

132

133

134

135

136

-6

-4

-2

0

2

4

6

-12 -10 -8 -6 -4 -2 0 2 4 6 8 10

Pola

rity

(PC2

)

Polarisability (PC1)

Page 36: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Case Study - solvent

• Solubility determination for recrystallization• Preferably no high boiling solvents• High yield, high purity• Polymorph Form A

36

Solvent PCA XRPDMethanol -1 -1 1 Form AEthanol -1 -1 0 Form A2-Propanol -1 -1 -1 Form A2-Butanol -1 -1 -1 Form AEthyl acetate 1 -1 -1 Form A + add. peakEthyl formate 0 -1 -1 Form A + add. peakTetrahydrofuran 1 -1 -1 Form AAcetone -1 -1 -1 Form BFormic acid -1 -1 1 No solidsAcetic acid -1 -1 1 No solids

-6

-4

-2

0

2

4

6

-10 -8 -6 -4 -2 0 2 4 6 8

PC2

PC1

Acid

Alcohol

Alkylamide

Amide

Aromatic

Aryl Halide

CHC

Ester

HC

Ketone

Nitrile

Nitro

Sulfoxide

Water

Page 37: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Case Study - solvent

• Solubility determination for recrystallization

• 10 solvents provide the overview of the whole solvent space• Selection of suitable / alternative process solvents based on PCA• Expected solubility behavior based on PCA confirmed

• No guarantee on polymorphic form• Form selection screening still required

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Page 38: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Summary

• Drug development is troubleshooting and risk management.

• Streamline the R&D, integrate process development, analytics and solid state chemistry to shorten timelines and strengthen the added value.

• Have the data accessible and searchable for the project team, not only a report with the conclusions.

• Use of automation leads to smart experiments for the overview to select optimal conditions. Screen more different factors, not just do more experiments.

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Page 39: Accelerating Drug Development through Automation · 2018. 6. 11. · Accelerating Drug Development through Automation. Crystallization Workshop. Milan, 7. th. June 2018. Dr Edwin

Stay connected at alcaminow.com

Thank you!