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Using opensource technologies to develop ROV payloads to observe and characterise the marine environment. *Teague. J 1 , Graham .G 2 , Allen .M.J 3 1 MRes Applied Marine Science, Plymouth University,Pl4 8AA, 2 Sir Alister Hardy Foundation for Ocean Science (SAHFOS),Citadel Hill,PL1 2PB, 3 Plymouth Marine Laboratory (PML),Prospect Place, Plymouth, Plymouth,PL1 3DH References: Blue planet: seas of life, television program, British Broadcasting Corporation (BBC), London, first broadcast : (12 Sep 2001). Census of Marine Life.(2015). Niskin Bottles .[ONLINE] Available at: http://www.coml.org/edu/tech/collect/niskin.htm.[ Accessed: 23 August 2015]. Marine Technology Society.(2012).What is an ROV?. [ONLINE] Available at: http://www.rov.org/rov_overview.cfm. [Accessed: 22 August 2015]. ROV.org.(2015). What is an ROV?. [ONLINE] Available at: http://www.rov.org/rov_overview.cfm.[Accessed: 08 January 2015]. Teague, J.(2013). Producing and using an ROV (Remotely Operated Vehicle) in benthic video surveys around the Cornish coast. FdSc Marine Science. Falmouth Marine School. Versatile Platform 3D Printing Custom RNA Profiling Payload Rapid Prototyping Research & Development Replacement parts New Revolutionary Technique “Off the shelf components” ‘Freeze’ samples in situ Open source Economical Rapid Deployment A Remotely Operated Vehicle (ROV) is a tethered underwater robot that allows the vehicle's operator to remain in a safe environment while the equipment (ROV) works in the potentially hazardous environment below. The opensource ROV, (OpenROV), offers a versatile mechanism for maritime surveying. The analysis of nucleic acid material from marine systems is currently commonlyachieved via Niskin samplingand preservationofnucleic acids is delayed until arrivalat the surface. This project aims to develop an in situ nucleic acid sampler which preserves the payload and therefor expands the capability of the OpenROV platform. Focus will be on the collection of marine biomass from seawater and metabolically ‘freezing’ the RNA profile in situ to prevent degradation and stress-induced deviance upon bringingthe sample to the surface, within a simple and cheap device attached to an ROV. We will aim to use this device to monitor microbial communities in real time usingbasic microscopy light to selectively target Specific water bodies for sampling. The nucleic acid preservation device will be constructed using various components such as Arduino and Raspberry pi for programmable controland a peristalticpump for sampling coupled with sensors monitoringdepth, temperature and salinity. Abstract: ROV Payloads Vast range of Payloads Already developed a Niskin for the ROV In situ Microscopy for ‘Targeted’ sampling

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Usingopensource technologies todevelopROVpayloadstoobserveandcharacterise themarineenvironment.

*Teague.J1,Graham.G2,Allen.M.J31MResAppliedMarineScience,PlymouthUniversity,Pl48AA,2SirAlister HardyFoundationforOceanScience(SAHFOS),CitadelHill,PL12PB, 3 PlymouthMarineLaboratory

(PML),ProspectPlace,Plymouth,Plymouth,PL13DH

References: Blueplanet:seasoflife,television program,BritishBroadcastingCorporation(BBC),London, firstbroadcast:(12Sep2001).Census ofMarineLife.(2015).Niskin Bottles.[ONLINE]Availableat:http://www.coml.org/edu/tech/collect/niskin.htm.[ Accessed:23August2015].MarineTechnologySociety.(2012).What isanROV?.[ONLINE]Availableat:http://www.rov.org/rov_overview.cfm.[Accessed: 22August2015].ROV.org.(2015).WhatisanROV?.[ONLINE]Availableat:http://www.rov.org/rov_overview.cfm.[Accessed: 08January2015].Teague,J.(2013).Producing andusinganROV(RemotelyOperatedVehicle)inbenthicvideosurveysaroundtheCornishcoast.FdSc MarineScience.FalmouthMarineSchool.

VersatilePlatform 3DPrinting

CustomRNAProfilingPayload

• RapidPrototyping• Research&Development• Replacementparts

• NewRevolutionaryTechnique• “Offtheshelfcomponents”• ‘Freeze’samplesinsitu

• Opensource• Economical• RapidDeployment

ARemotelyOperatedVehicle(ROV)isatetheredunderwaterrobotthatallowsthevehicle'soperatortoremaininasafeenvironmentwhiletheequipment(ROV)worksinthepotentiallyhazardousenvironmentbelow.Theopensource ROV,(OpenROV),offersaversatilemechanismformaritimesurveying.

TheanalysisofnucleicacidmaterialfrommarinesystemsiscurrentlycommonlyachievedviaNiskin samplingandpreservationofnucleicacidsisdelayeduntilarrivalatthesurface.ThisprojectaimstodevelopaninsitunucleicacidsamplerwhichpreservesthepayloadandthereforexpandsthecapabilityoftheOpenROV platform.

Focuswillbeonthecollectionofmarinebiomassfromseawaterandmetabolically‘freezing’theRNAprofileinsitu topreventdegradationandstress-induceddevianceuponbringingthesampletothesurface,withinasimpleandcheapdeviceattachedtoanROV.WewillaimtousethisdevicetomonitormicrobialcommunitiesinrealtimeusingbasicmicroscopylighttoselectivelytargetSpecificwaterbodiesforsampling.

ThenucleicacidpreservationdevicewillbeconstructedusingvariouscomponentssuchasArduinoandRaspberrypiforprogrammablecontrolandaperistalticpumpforsamplingcoupledwithsensorsmonitoringdepth,temperatureandsalinity.

Abstract:

ROVPayloads• VastrangeofPayloads• AlreadydevelopedaNiskin fortheROV• InsituMicroscopyfor‘Targeted’sampling