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Innovative Automation for Biotechnology #1 Innovative Automation for Biotechnology Automated Sampling Systems Cell Culture and Fermentation

Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

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Page 1: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 1Innovative Automation for Biotechnology

Automated Sampling Systems

Cell Culture and Fermentation

Page 2: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 2# 2

• 25 employees in Massachusetts• 8 representatives across the US• 13 distributor partnerships throughout Europe and Asia

Pacific

-

UK

BENELUXGermany

France

Sydney

KOREA

Thailand

ITALY

CHINA

Auckland

INDIA

Sweden, Norway, Denmark

PORTUGAL UAE

Indonesia, Singapore

JAPAN

Page 3: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 3# 3

SanitaryReactor Barrier

Sample

Draw,

Prep

And

Delivery

Data

Analysis

Feedback

to

Controller

Optimization of

Fermentation or

Cell Culture

AutomatedClosedLoop

Solution

Phase 1

Phase 2

Phase 3

Page 4: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 4# 4

Collaborations with Industry Leaders Providing Sample Draw, Prep and Analysis

HPLC

Nutrient Monitoring

Cell Viability

Fraction Collection

Page 5: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 5

Automated Sampling Automated Delivery Automated Analysis

Split DeliveryOne Sample – Four Analyses

Page 6: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 6# 6

Fraction Collector

• The ARS-M delivers samples to sterile vials in the Fraction Collector for post run analysis. – Peltier Temperature Control– Maintains Temperature in a Range of 4°C to 37°C

• Optional Subzero Cooling with -40°C Chiller

Vial Size

Fraction Collector 60 Chilled Positions 15 ml

Fraction Collector 96 Chilled Positions 2 ml

Fraction Collector 24 Chilled Positions 50 ml

Fraction Collector Non-Refrigerated 50 ml

Autosampler 60 Position Chilled Tray 15 ml

Page 7: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 7# 7

ManualSampling

Minimal Data Points

Page 8: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 8# 8

Around-the-ClockOnline Sampling

All Day, All Night, All by Itself

Page 9: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 9Innovative Automation for Biotechnology

ARS-M 840 Eight Inputs to 4 Instrument OutputsARS-M 440 Four Inputs to 4 Instrument OutputsARS-M 140 One Input to 4 Instrument Outputs

ARS-M SERIESAUTOMATED REACTOR SAMPLER

Page 10: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 10# 10

Page 11: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 11# 11

Page 12: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 12# 12

Page 13: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 13# 13

Volumes needed for analytical analysis

4 ml

4 ml

3 ml

6 ml

ARS

Cell Counter

HPLC

2.5L Working Vol

Page 14: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 14# 14

Reactor Sampling VolumeGoal is to limit total volume removed to be <10% of initial working volume

100 150 200 250

1000

1500

2000

2500

Volume Available for Sampling, ml

Working Volume

10% Volume

Reactor Size Limitation on Sampling

Page 15: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 15# 15

Biopharma

Animal Cell Culture

Ecoli_Yeast

Filamentous Fungi

Increasing Difficulty of Sampling

Page 16: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 16# 16

DiptubeCell containing sampling

RIM ARSDiptube

Autoclave Sanitize in place, chemical

Glass or S.S. Bioreactor

Clamp/valve

Tubing sized to sampleviscosity

Connect by sanitary QC or tube welder

Page 17: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 17# 17

Using dip tube-peristaltic loop for viscous samples

RIM ARS

Steam in place Sanitize in place, Chemical

Glass or S.S. Bioreactor

Clamp

tubing

Note: Peristaltic loop can be connected to top of head plate for Autoclaved Glass reactors. In line filtering available for cell free sampling.

Peristaltic Pump and loop

Connection by sterile QC or tube welder

Page 18: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 18# 18

On line HPLC

Page 19: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 19

Groton-Agilent Online HPLC Assay System

• The Groton AAMK (Agilent Autosampler Modification Kit) turns the Agilent Autosamplerinto a Simple Fraction Collector.

• Once a fraction is collected in a vial or well plate the ARS-M starts the Agilent ChemStation and the 1200 technology is standard.

Fully Programmable, Fully Automatic24 Hours a Day, 7 Days a Week of Sampling

Page 20: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 20# 20

ARS-M Hardware Upgrade Kitfor Agilent 1200 Autosamplers

3

4

1

6

2

5

Sample-Vial

Seat

Needle

Metering Device

Waste

Buffer Loop

Reactor pump input

Waste

6

3

4

1

2

5

Waste

ARSFLUSH

ALSMAIN

Internal plumbing of G1367D Hi-Performance Automated Liquid Sampler (Hi-P ALS)

Groton adds a valve and modifies the Agilent Autosampler internal valve to allow for Fraction Collection.

Page 21: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 21# 21

ChemStation Integration• Set vial position where next fraction from

ARS-M will be collected.

• Set ChemStation methods for running samples, etc. within ARS-M commands.

• Start listening for commands from ARS.

• Stop listening to commands from ARS.

• Manually execute an ARS-M command.

When ChemStation is not listening for commands from the ARS-M, it can be used in regular analytical mode as a standalone instrument.

Page 22: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 22# 22

On Line HPLC- Biofuel or Biopharma

min1 2 3 4 5 6 7

LU

0255075

100125150175200

0

LC: Agilent 1200 Series Rapid Resolution LCColumn: Agilent ZORBAX RRHT Eclipse Plus-C18, 2.1 x 50 mm, 1.8 µmDetector: Agilent 1200 Series Fluorescence DetectorSample: Amino acids, 50 pmol on column

Mobile phase A: 10mM Na2HPO4 – 10mM Na2B4O7, pH 8.2Mobile phase B: ACN:MeOH:H2O 45:45:10 by volumeFlow rate: 0.420 mL/minGradient timetable was used

Page 23: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 23Innovative Automation for Biotechnology

AUTOMATION FOR ETHANOL PRODUCTION

MKT-105 Rev A

Page 24: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 24# 24

Biofuel System for On-line HPLC

Page 25: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 25# 25

Biopharma Case StudyAutomation vs Manual Sampling

30 Liter B.Braun - 25 mm Ingold Side Port SIP Valves for Autosampling

Analysis Accuracy / Precision

Fraction Collector 2ml – 15 ml

Viable Cell Count ≤ 5%

Viability ≤ 2%

pH ≤ 0.035 Units

pO2 ≤ 7%

pCO2 ≤ 7%

Glucose, Lactate NH4 ≤ 7% 

Amino Acids ≤ 10%

Page 26: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 26# 26

Cedex Interface

0.0

5.0

10.0

15.0

20.0

25.0

30.0

0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

Elapsed Time (days)

Prod

uct C

once

ntra

tion

(mg/

L)

50.0

60.0

70.0

80.0

90.0

100.0

110.0

Cedex VCC Manual Cedex VCC Groton Cedex Via Manual Cedex Via

Page 27: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 27# 27

PH Evaluation

Page 28: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 28# 28

Glucose Evaluation

Page 29: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 29# 29

Lactate Evaluation

Page 30: Automated Sampling Systems...# 2 • 25 employees in Massachusetts ... 0.420 mL/min. Gradient timetable was used. Innovative Automation for Biotechnology # 23. A. UTOMATION FOR. E

Innovative Automation for Biotechnology # 30# 30

Future of Bioreactor Sampling

• Biopharm: Measurement of critical process parameters ( i.e. amino acids) along with product, ie. Glycosylated proteins. Feedback control

• Biofuel: Measurement of both fermentation and saccharification process. Enzyme monitoring