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임상세포유전학 CLINICAL CYTOGENETICS
cell
chromosome
DNA
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출생전 진단 : 34 세 이상 임산부 , 염색체 이상아 가족력 출생후 소아기 : 다발성 기형 설명하기 어려운 정신박약 , 성장지연 성염색체질환이 의심되는 경우
성장기 이후 : 외성기 이상 (ambiguous genitalia),
무월경 , 습관성 유산 , 불임 ( 배우자와 같이 검사 )
혈액종양 , 고형종양
염색체검사 대상자는 누구인가 ?
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Problems of early growth & development, failure to thrive, developmental delay, dysmorphic faces, multiple malformations, short stature, ambiguous genitalia, mental retardation
Stillbirth & neonatal death - amenorrhea, infertility, recurrent miscarriage (spontaneous abortion)
Fertility problems Family history Neoplasia Pregnancy in woman of advanced age
Clinical Indications for Chromosome Analysis
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● Definition : IQ score <70-75, 2.5-3% Mild (85%): IQ 50-75, Moderate (10%): IQ 35-55, Severe (3-4%): IQ 20-40, Profound (1-2%): IQ 20-25
● Causes ① Genetics : Fragile X syndrome, Single gene defect,
Chromosome disorders (Down syndrone, etc)② Prenatal illness : Fetal alcohol syndrome, Drug abuse
& cigarette smoking, Maternal infection, hypertension,
toxemia, Birth defect① Childhood illness: hyperthyroidism, whooping cough,
chickenpox, measles② Environmental factors: malnutrition, lead poisoning
Mental Retardation (MR)
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Incidence of Cytogenetic Ds
1% of live births2% of pregnancies in women older than 35 years50% of all spontaneous first-trimester abortions
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Peripheral Blood (PB); Congenital anomaly, Fragile X syndrome Bone marrow (BM); Hematologic malignancies (leukemia, MDS, MPN)
Lymph node; Malignant lymphoma Soft tissue; Solid tumor
Amniotic fluid (AF), CVS; Prenatal diagnosis Skin biopsy- fibroblast
염색체검사 검체 선택
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RPMI 1640FBS (15%)Pen-StrepL-GlutaminePHAPB/BM cells
MTX(10-7M)
Thymidine (10-5M)
1) PB/BM Culture
3-5 hrs 17 hrs
2) Harvest5 hrs1) Colcemid (50 g/ml) treatment
2) Hypotonic Solution (KCl;0.075M) treatment3) Fixation (methanol:Acetic acid=3:1)
3) Slide preparation & Staining (Giemsa-Trypsin)4) Microscopy and Karyotyping 5) Printing (Photography) and Reporting
Giemsa Banding (Giemsa Banding (G-BandingG-Banding) ) TechniqueTechnique
72 hrs
High-resolution Banding TechniqueHigh-resolution Banding TechniqueUsing Methotrexate Cell SynchronizationUsing Methotrexate Cell Synchronization
* PHA, Phytohemagglutinin (T cell mitogen)**MTX , Methotrexate
Back to Basic염색체검사 장비 및 재료
CO2 incubator at 37oC, 5%CO2
clean bench
Inverted Microscope
Slide preparation
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Conventional Cytogenetics in Hematologic Malignancies
검사자 숙련도에 따라 슬라이드의 질적 차이가 많다분열세포 적고 , 염색체 길이 짧고 , quality 는
불량하다 . 복잡하고 다양한 핵형을 보이는 경우가 많다
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CCD camera
Main ProgramMain ProgramMicroscope
Monitor PC Printer
Computerized Image Analyzer Cytovision®
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46,XY
Chromosome Identification ( 염색체 동정 )
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A
C
B
D
F G
E
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Back to BasicSchematic Diagram of Chromosomes
Metacentric Submetacentric Acrocentric
9q34.19q34.1
qterqter
pterpterpp
cencen
ArmArm RegionRegion BandBand SubbandSubband
Back to BasicAbnormalities of Chromosome number
46,XY (XX) Normal male (female) karyotype
Heteroploid ( 이수성 , 異數性 ) – 염색체 수가 46 개가 아닌 경우
Euploid ( 정배수성 , 正倍數性 ) haploid (n) polyploid - diploid (2n), triploid (3n), tetraploid(4n),
Aneuploid ( 이수성 , 異數性 ) : state of not having euploidy Aneuploid karyotypes are given names with the suffix -somy (rather
than -ploidy, used for euploid karyotypes), such as trisomy and monosomy.
ex) Down syndrome = Trisomy 21 syndrome Turner syndrome = Monosomy X syndrome
Back to BasicExamples of Proper Nomenclature and Description of Structural Aberration
Nomenclature Explanation
46,XY (XX) Normal male (female) karyotype47,XY,+21 Female trisomy 21, Down syndrome
del(11)(q23) Terminal deletion ( 결실 )
del(5)(q22q33) Interstitial deletion dup(5)(p14p15.3) duplication ( 중복 )inv(9)(p11q13) Pericentric inversion ( 역위 )inv(3)(q22q26) Paracentric inversioni(17q) Isochromosome ( 동완염색체 )t(9;22)(q34;q11) Balanced translocation ( 전좌 , 전위 )der(13;21)(q10;q10) Robertsonian translocationder(1)t(1;7)(p11;q11) Derivative chromosome ( 파생염색체 )
add(7)(p11) Extra material of unknown origin ( 추가 )mar Marker chromosome ( 표지염색체 )
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Terminal deletion del(11)(q23) Interstitial deletion del(5)(q22q33) Ring chromosome r(7)(p22q36)
Back to BasicInsertion ins(22;3)(q12;q21q32)
Robertsonian translocation der(13;21)(q10;q10)
Reciprocal translocation t(2;5)(q21q31)
Duplication dup(1)(q22q25)
Back to Basic Robertsonian translocation
der(13;15)der(13;15)
45,XX,der(13;15)(q10;q10)
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Paracentric inversion inv(3)(q21q26.2)
Isochromosome i(17)(q10)
Pericentric inversionInv(3)(p13q21)
Back to BasicISCN 2009
An International System for Human Cytogenetic Nomenclature (2009)
The complete citation for reference lists is:
ISCN (2009):An International System for Human Cytogenetic Nomenclature, Schaffer L.G., Tommerup N. (eds);S. Karger, Basel, 2009
ISCN (1985, 1991, 1995, 2005)
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Patient-Specific Embryonic Stem Cells Derived from Human SCNT Blastocysts. Science: 19 May 2005
- 체세포 복제 방식을 통한 환자 맞춤형 줄기세포 확립
21. F. Mitelman, An International System for Human Cytogenetic Nomenclature (S. Karger, Basel, Switzerland, 1995).
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Morphology (A) and karyotyping (B) of interspecies blastocysts derived from a human cord fibroblast transfer into enucleatedbovine oocyte. An interspecies blastocyst at hatching were obtained 144 hours after culture and subsequently provided forchromosome analysis using a cytovision. Karyotyping shows 46 pairs of autosome and sex chromosome of XY.
A.K. Tarkowski and J. Rossant, Haploid mouse blastocysts developed from bisected zygotes. Nature 259 (1976), pp. 663–665
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형광물질로 표지된 소식자를 이용하여 염색체의 전체 또는 일부분에 보합시키는 기법으로 염색체 이상의 규명과 유전자 위치 규명 (mapping) 에 이용
Fluorescence in situ Hybridization (FISH)
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1. Slide preparation2. Slide denaturation3. Probe preparation
4. Hybridization
5. Post-hybridization wash 6. Detection7. Count stain
형광동소보합법 (FISH) 검사과정
Back to BasicClinical Application of FISH
Microdeletion syndromes (=contiguous gene syndrome)
Prader-Willi syndrome (del 15q11.2-q12)Angelman syndrome (del 15q11-q13)DiGeorge/CATCH 22 syndrome (del 22q11)Williams syndrome (del 7q11.23)WAGR syndrome (Wilm's tumor, aniridia,
genitourinary malformation and mental retardation) (del 11p13)
Langer-Giedion syndrome (del 8q24)Miller Dieker syndrome (del 17p13.3)Smith-Magenis syndrome (del 17p11.2)Retinoblastoma (del 13q13)
Marker chromosome = Very small unidentified chromosome Supernumerary chromosome
Extra structurally abnormal chromosomes
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Multicolor FISH (mFISH, M-FISH, SKY) Cross-species color banding, RxFISH
indispensable for the precise characterization of complex chromosome rearrangements and numerical chromosome aberrations
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Comparison of conventional CGH and array-CGH
• CGH (comparative genomic hybridization) : survey DNA copy number variations of whole genome.
• With CGH, differentially labeled test (i.e. tumor) and reference (i.e. normal individual) genomic DNAs are cohybridized to normal metaphase chromosomes, and fluorescence ratios along the length of chromosomes provide a cytogenetic representation of the relative DNA copy-number variation.
• Chromosomal CGH resolution is limited to 10-20 Mb –therefore, anything smaller than that will not be detected.
Array based comparative genome hybridization
Back to Basic한림의대
세포유전학 검사정보
강동성심병원 진단검사의학과http://labmed.hallym.ac.kr
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Regenerative Medicine
Genetics, Genomics, Proteomics