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Beginning of Microbes Bacteria first appeared on earth about 3.6 billion years ago, long before the appearance of Homo sapiens around 100,000 years ago.. Van Leeuwenhoek was the first person to visualize, graphically illustrate, and label "animalcules" (bacteria) that he found in plaque scraped from his own teeth.

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Page 1: Beginning of Microbes - KSUfac.ksu.edu.sa/sites/default/files/lec._2_bacterial... · 2017. 10. 3. · Beginning of Microbes • Bacteria first appeared on earth about 3.6 billion

BeginningofMicrobes•  Bacteriafirstappearedon

earthabout3.6billionyearsago,longbeforetheappearanceofHomosapiensaround100,000yearsago..VanLeeuwenhoekwasthefirstpersontovisualize,graphicallyillustrate,andlabel"animalcules"(bacteria)thathefoundinplaquescrapedfromhisownteeth.

Page 2: Beginning of Microbes - KSUfac.ksu.edu.sa/sites/default/files/lec._2_bacterial... · 2017. 10. 3. · Beginning of Microbes • Bacteria first appeared on earth about 3.6 billion

Biofilmisacomplexsubstance.

•  AbiofilmisacomplexaggregaEonofmicroorganismsgrowingonasolidsubstrate.Biofilmsarecharacterizedbystructuralheterogeneity,geneEcdiversity,complexcommunityinteracEons,andanextracellularmatrixofpolymericsubstances.

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BiofilmsupportstheBacterialgrowth

•  Biofilmareacommonmodeofbacterialgrowthinnatureandtheirpresencehasanenormousimpactonmanyaspectsofourlives,suchassewagetreatment,corrosionofmaterials,foodcontaminaEonduringprocessing,pipecollapse,plant-microorganismsinteracEoninthebiosphere,theformaEonofdentalplaque,thedevelopmentofchronicinfecEonsinliveEssue(masEEs,OEEs,pneumonia,urinaryinfecEons,osteomyeliEs)orproblemsrelatedtomedicalimplants.

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BiofilmsincreasesAn:bio:cresitance

WithmicroorganismsarehighlyresistanttoanEmicrobialtreatmentandaretenaciouslyboundtothesurface

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TechnologyunderstandsBiofilmsbe>er…

•  Technologicalprogressinmicroscopy,moleculargeneEcsandgenomeanalysishassignificantlyadvancedourunderstandingofthestructuralandmolecularaspectsofbiofilms,especiallyofextensivelystudiedmodelorganismssuchasPseudomonasaeruginosa.

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StepsinBiofilmforma:on

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Dentalplaque

•  Dentalplaqueisayellowishbiofilmthatbuildupontheteeth.Ifnotremovedregularly,itcanleadtodentalcaries.

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Forma:onofDentalBiofilms

•  Throughthegrowthprocessoftheplaquebiofilm,themicrobialcomposiEonchangesfromonethatisprimarilygram-posiEveandstreptococcus-richtoastructurefilledwithgram-negaEveanaerobesinitsmorematurestate.

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CDC–onBiofilms

•  Biofilmsformonthesurfaceofcatheterlinesandcontactlenses.Theygrowonpacemakers,heartvalvereplacements,arEficialjointsandothersurgicalimplants.TheCDC(CentersforDiseaseControl)esEmatethatover65%ofNosocomial(hospital-acquired)infecEonsarecausedbybiofilms.

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BiofilmsinterfereinAn:bio:cTherapy

•  BacteriagrowinginabiofilmarehighlyresistanttoanEbioEcs,upto1,000Emesmoreresistantthanthesamebacterianotgrowinginabiofilm.Standardan8bio8ctherapyisoTenuselessandtheonlyrecoursemaybetoremovethecontaminatedimplant.

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BacteriaassociatedwithBiofilmsdiffer

•  BacterialivinginabiofilmcanhavesignificantlydifferentproperEesfromfree-floaEngbacteria,asthedenseandprotectedenvironmentofthefilmallowsthemtocooperateandinteractinvariousways.OnebenefitofthisenvironmentisincreasedresistancetodetergentsandanEbioEcs,asthedenseextracellularmatrixandtheouterlayerofcellsprotecttheinteriorofthecommunity.

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BiofilmsaGreatthreattoImplants

•  AsignificantnumberofpeopleareaffectedbybiofilminfecEonswhichdeveloponmedicaldevicesimplantedinthebodysuchascatheters(tubesusedtoconductfluidsinoroutofthebody),arEficialjoints,andmechanicalheartvalves.Whenimplantedmaterialbecomescolonizedbymicroorganisms,aslowdevelopingbutpersistentinfecEonresults.

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BiofilmandAn:bio:cresistance•  Akeypropertyofbiofilms

isthatindividualmicroorganismsareboundtogetherbyapolymericsubstanceThisprotecEveencapsulaEonisbelievedtoplayaroleinsomeanEbioEc-resistantinfecEon.

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BiofilmsinCys:cfibrosis

•  Biofilmsareinvolvedinnumerousdiseases.IncysEcfibrosispaEentshavePseudomonasinfecEonsthatoTenresultinanEbioEcresistantbiofilms.

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Endocardi:sandBiofilms

•  MicroorganismsmayaYachanddevelopbiofilmsoncomponentsofmechanicalheartvalvesandsurroundingEssuesoftheheart,leadingtoacondiEonknownasprostheEcvalveendocardiEs.TheprimaryorganismsresponsibleforthiscondiEonareS.epidermidis,S.aureus,Streptococcusspp.,gram-negaEvebacilli,diphtheroids,enterococci,andCandidaspp.Theseorganismsmayoriginatefromtheskin,otherindwellingdevicessuchascentralvenouscatheters,ordentalwork.

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BiofilmsandContactlenses•  BacterialbiofilmformaEon

oncontactlensesandcontactlensstoragecasesmaybeariskfactorincontactlens-associatedcornealinfecEons.StudieshaveshownthatcontaminaEonoflenscasesbybacteria,fungi,andamoebaeiscommonwith20%to80%oflenswearershavingacontaminatedlenscase.

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UrinarycathetersandBiofilms

•  Urinarycathetersaretubularlatexorsiliconedevices,whichwheninsertedmayreadilyacquirebiofilmsontheinneroroutersurfaces.TheorganismscommonlycontaminaEngthesedevicesanddevelopingbiofilmsareS.epidermidis,Enterococcusfaecalis,E.coli,Proteusmirabilis,P.aeruginosa,K.pneumoniae,andothergram-negaEveorganisms.Thelongertheurinarycatheterremainsinplace,thegreaterthetendencyoftheseorganismstodevelopbiofilmsandresultinurinarytractinfecEons.

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Biofilmsandindwellingmedicaldevices

•  Biofilms on indwelling medical devices may becomposed of gram-posiEve or gram-negaEvebacteriaoryeasts.Bacteriacommonly isolatedfromthesedevicesincludethegram-posiEveEnterococcusfaecalis, Staphylococcus aureus, Staphylococcusepidermidis, and Streptococcus viridians; and thegram-negaEve Escher ichia col i , K lebs ie l lapneumoniae, Proteus mirabilis, and Pseudomonasaeruginosa.

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IndwellingcathetersandBiofilms*•  Central venouscatheters, the referencemethod forquanEficaEonofbiofilmsoncatheterEpsistheroll-plate technique, inwhich the Ep of the catheter isremoved and rolled over the surface of anonselecEve medium. QuanEficaEon of the biofilmdependson thenumberof organisms recoveredbycontact with the agar surface. Biofilm-associatedcells on the inner lumen of the device are notdetectedwiththismethod,whichhaslowdiagnosEcsensiEvity and low predicEve value for catheter-relatedbacteraemia.

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IndwellingcathetersandBiofilms*

•  InaddiEon,thismethodcannotdetectmorethan1,000colony-formingunits(CFU)perEp.AmethodthatusedsonicaEonplusvortexingasameansofquanEfyingbiofilmsoncatheterEpsshowedthatalevelof104CFUperEpispredicEveofcatheter-relatedsepEcaemia

*BiofilmsandDevice-AssociatedInfec:onsRodneyM.DonlanCentersforDiseaseControlandPreven:onAtlanta,Georgia,USA

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An:bio:ctherapyalonemaynotcure?

•  AnEmicrobial agents areadministered during valvereplacement and wheneverthepaEenthasdentalworkt o p r e v e n t i n i E a laYachment by killing allmicroorganisms introducedinto the bloodstream. Aswith biofilms on otheri n d w e l l i n g d e v i c e s ,rela:vely few pa:ents canbe cured of a biofilminfec:on by an:bio:ctherapyalone

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Biofilmsneedhigherconcentra:onofAn:bio:cs

•  BiofilmsareremarkablydifficulttotreatwithanEmicrobials.AnEmicrobialsmaybereadilyinacEvatedorfailtopenetrateintothebiofilm.InaddiEon,bacteriawithinbiofilmshaveincreased(upto1000-foldhigher)resistancetoanEmicrobialcompounds,eventhoughthesesamebacteriaaresensiEvetotheseagentsifgrownunderplanktoniccondiEons.

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BiofilmshelpGenetransfer

•  Biofilmsincreasetheopportunityforgenetransferbetween/amongbacteria..Genetransfercanconvertapreviousavirulentcommensalsorganismintoahighlyvirulentpathogen.

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Biofilmscontributefornewphenotypes

•  Bacteriaexpressnew,andsomeEmesmorevirulentphenotypeswhengrowingwithinabiofilm.SuchphenotypesmaynothavebeendetectedinthepastbecausetheorganismsweregrownonrichnutrientmediaunderplanktoniccondiEons.ThegrowthcondiEonsarequitedifferentparEcularlyinthedepthsofbiofilms,

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Biofilms–ProtectsfromPhagocytosis

•  PhagocytesareunabletoeffecEvelyengulfabacteriumgrowingwithinacomplexpolysaccharidematrixaYachedtoasolidsurface.Thiscausesthephagocytetoreleaselargeamountsofpro-inflammatoryenzymesandcytokines,leadingtoinflammaEonanddestrucEonofnearbyEssues.

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Currentobjec:vesonBiofilmresearch

•  oDevelopmentofimprovedimagingofbiofilmsinsitu;oDevelopmentofimprovedclinicallyrelevantinvitroandinvivomodelsofbiofilmsunderspecificinvivocondiEonssuchasflowrate,nutrientcontent,andtemperature;

•  oDevelopmentofbeYerprobes(geneEc,metabolic,andimmunological)forreal-Emeanalysis;oStudiesofquorumsensing/signalingmolecules;

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Currentobjec:vesonBiofilmresearch

•  oFurthercharacterizaEonofbiofilm-specificgeneexpression;

•  oStudiesoftheexchangeofgeneEcmaterialwithinbiofilms;

•  oStudiesoforganiccontaminantsonsubstrata,andtheirinfluenceonbiofilmstructure;oDevelopmentofnovelapproachestocontrolpathogenicbacteriaby,forexample,devisingstrategiestofavourgrowthofnon-pathogenicmicroorganismsinbiofilmcommuniEes;

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CurrentobjecEvesonBiofilmresearch

•  oStudiesofpathogenicmechanismsofmicrobesgrowinginbiofilms;oElucidaEonofmechanismsofresistanceofbiofilmstoanEmicrobialagents;oStudiesofhostimmuneresponses,bothinnateandadap:vetobiofilms;

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Currentobjec:vesonBiofilmresearch

•  InstudiesofinfecEouslungdiseaseincysEcfibrosis;oStudiesonthepotenEalofdiagnosEcproceduressuchasBronchoalveloarlavage(IrrigaEon)andbronchoscopytodisturblocalbiofilmfloraandinoculatedistantlocaEons;

•  oDevelopmentofmathemaEcalmodelsandcomputersimulaEonsofbiofilms;oDevelopmentofthemethodologyfortheprevenEonandcontrolofbiofilmsfromcatheters,waterunitlines,andotherclinicallyimportantsolidsurfaces;.

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SearchingforalternaEves–Tissueengineering

•  Role of biofilms in mulEple pathologies and thedifficultyinresolvingthesepathologiesspeakstotheimportance of developing means of replacing orenhancing the therapies already in use. The use ofsyntheEc materials in the body ranges fromcatheters to mesh to stents to heart valves andbeyond. UnEl the development of viable andpracEcalEssueengineering, thennumberandtypesofapplicaEonsinwhichsyntheEcmaterialsareusedwillconEnuetoincrease.

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EmergingMethods•  Severalresearchersare

findingsoluEonsforthecureofBiofilms,yetitisexperimental,withadvancesinmolecularbiologybeYermodeltreatmentscanbeidenEfiedtoreducetheproblemofBiofilminterferenceinAnEbioEctherapy.