Bio 127 lec3

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    Prokaryotic and Eucaryotic

    Cell Structures

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    Morphology of Bacteria

    A. Size- bacterial cells vary in size depending on the species,but most are approximately 0.5 to 1 um in diameter or

    width

    e.g. Staphylococci and streptococci (D=0.75 to 1.25 um)

    cylindrical typhoid and dysentery bacteria (0.5 um to

    1 um in width and 2 to 3 um in length)

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    C. Arrangement

    Examples:

    a. Neisseria

    b. Streptococcus species

    which cause throat and

    wound infection

    c. Pediococcus

    d. Staphylococcus

    e. Sarcina

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    Patterns of arrangement

    Examples

    a. Corynebacterium diphtheriae

    b. Caulobacter

    c. Streptobacillus

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    Bacterial Cell Structure

    1. Appendages flagella and pili

    2. Surface Layers- capsule, cell wall and plasma

    membranes, mesosomes3. Cytoplasm nuclear material, plasmids, ribosomes,

    inclusions and chromatophores

    4. Special structures

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    Flagella (singular, flagellum)-thin, hairlike filaments extend from the cytoplasmic

    membrane and through the cell wall

    -propel bacteria through liquid sometimes as fast as100 um per second (= to 3000 body lengths/min)

    -composed of three parts:

    1. basal body

    2. a short hooklike structure

    3. a long helical filament

    L ringP ringRod

    S ringM ring

    Gram-negative

    (E. coli)

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    Pseudomonas

    Some pseudomonads

    spirilla

    Escherichia

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    Periplasmic flagella-also known as axial filament

    -special flagella that arise atthe cell poles and wind

    around the cell body or

    protoplasmic cylinder

    beneath the outer mem-

    brane of the cell wall

    -responsible for the corkscrew-

    like motility of the

    spirochetes

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    Chemotaxis

    - the movement of bacteria in response to chemicals

    in the environment

    *attractant towards*repellant away

    Polar flagellated bacteria (swim in back- and- forth fashion)

    -reverse their direction by reversing the direction offlagellar rotation

    Peritrichous flagellated bacteria swim in a very complicated

    manner (the cell swims along a relatively straight

    track called a run, when the flagellar motors reverse,the bundleof flagella flies apart and the cell tumbleswildly)

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    http://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.mov

    Movie of motile Rhodobacter spheroideswith fluorescent labelled-flagella

    http://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.movhttp://www.rowland.org/labs/bacteria/movies/rsphe_f_swim_1.mov
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    Fimbriae and Pili

    - found in gram-negative bacteria

    -shorter, straighter and more numerous than

    flagella

    -not for motility

    -are hollow like flagella but nonhelical

    -thinner (3 to 10 nm in diam)

    Fimbria

    - belong to a class of proteins called lectins

    which recognize and bind to specific sugar resi-dues in cell surface polysaccharides)

    -frequently called adhesins (bacteria

    possessing fimbriae have a tendency to adhere

    to each other as well as to animal cells)

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    N. gonorrhoeae and enterotoxigenic E.coli

    -ability of certain organisms to cause

    disease is associated with the possessionof fimbriae (loss of fimbriae is accompanied

    by a loss of virulence)

    Pilus or Pili-morphologically and chemically similar to

    fimbriae

    -involved in sexual reproduction of bacteria

    (F pilus)*those with F pilus are donor cells and

    those without it are recipient cells

    (genetic materials are transferred during

    bacterial conjugation)

    Gl l

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    Glycocalyx

    - a layer of viscous material that surrounds

    some bacterial cells

    - special stains are used to show this layersuch as India ink (appears halo under a light

    microscope)

    -composed of polymers

    a. Capsule if the glycocalyx is organizedinto a defined structure and is attached

    firmly to the cell wall

    b. Slime layer- if the glycocalyx is disorganized

    and without any definite shape-attached loosely to the wall

    -tends to be soluble in water

    -medium becomes highly viscous

    -produce stringiness in milk

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    Capsules maybe:

    1. Homopolysaccharide

    -single kind of sugar-synthesis of glucan from sucrose by

    Streptococcus mutans-to adherefirmly to smooth tooth

    surfaces and cause dental caries orcavities (without the sticky glucan, the

    microorganisms might be swept away

    by flowing saliva)

    2. Heteropolysaccharide-more than one kind of sugar

    -capsule ofS. pneumoniae , type VI,consists of galactose, glucose &

    rhamnose

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    4. Capsules may prevent attachment and

    lysis of cells by bacteriophages(viruses

    that attack bacteria)5. Capsules protect pathogenic from being

    engulfed by the white blood cells that

    defend the mammalian body

    6. Nuisance to industry (responsible for

    accumulation of slime in manufacturing

    equipment that can clog filters and coat

    pipes affecting the quality of the finalproduct)

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    The Cell Wall of Prokaryotes:

    Peptidoglycan and RelatedMolecules

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    Bacterial cell wall

    - fundamental differences in ultrastructure ofthe cell wall are responsible for the reaction

    (+ or -) of bacteria towards the Gram stain.

    - In both types of cell,the cytoplasmicmembrane issurrounded and supported bya cell wall, which provides strength, rigidity

    and shape. (prevents cell from expanding

    and eventually bursting bec of water

    uptake)

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    -Usually essential for cells to grow and divide

    (cells whose walls have been removed in thelaboratory are incapable of normal growth and

    division)

    -Account for as much as 10 to 40% of the dry

    weight of the cell depending on the species

    and the cultural conditions

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    This material consists of strands ofalternating repeats ofN-acetylglucosamineandN-acetylmuramic acid, with the latter

    cross-linked between strands by shortpeptides. Many sheets of peptidoglycan canbe present, depending on the organism.

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    Each peptidoglycan repeating subunit iscomposed of four amino acids (L-alanine, D-alanine, D-glutamic acid, and either lysine ordiaminopimelic acid) and twoN-acetyl-glucose-like sugars

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    peptidoglycan

    Cytoplasmic

    membrane

    Outer membrane

    peptidoglycan

    Gram + Gram -

    Cytoplasmic

    membrane

    Cell wallCell wall

    15-80 nm

    7-8 nm

    7-8 nm

    2-3 nm

    Schematic cross sections of bacterial cell wall

    Typical lipid-protein bilayer

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    Peptidoglycans Alias murein or mucopeptide

    Present in almost all bacteria (exceptions: wall-

    less mycoplasmas; archaebacteria)

    Unique to bacteria Essential function

    (physical support of thecytoplasmic membrane)

    Common architecture

    but variations in

    structural detail Ideal target forselective toxicitycontains3 kinds of

    building blocks

    1 2

    3(tetrapeptide)

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    http://upload.wikimedia.org/wikipedia/commons/6/6f/Gram-positive_cellwall-schematic.png
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    Gram-positive

    Relatively thick and featureless (electronmicroscope)

    Major component (~50%) is peptidoglycan

    No lipid and often no protein

    Accessory polymers (teichoic acid and/orteichuronic acid) covalently linked toPeptidoglycan or to cell membrane

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    2 major forms ofteichoic acid

    1. polymers of ribitol phosphates

    2. polymers of glycerol-aid in the transport of positive ions in

    and out of cell

    -aid in the storage of phosphorus

    -highly antigenic(i.e. They will induce a

    host to make specific antibodies); provide the

    antigenic determinants used in the serological

    identification of many groups and species ofgram-positive bacteria

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    Lipopolysaccharides (LPSs)

    -characteristic of gram negative bacteria(gram+ bacteria ,cell wall has no LPS)

    -composed of 3 covalently linked

    segments:

    1. Lipid A - firmly embedded in themembrane

    -extremelyimportant bec of itstoxicity to animals (also)

    known as an endotoxinand can

    act as a poison-causing fever,

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    *the outer membrane is selectively permeable to

    molecules on the basis of their electric charge

    and molecular size

    Porinsdiffusion channels formed by special proteins

    where molecules pass

    The general designation foroutermembraneproteinsincluding porins and receptors isOmp.

    Removal of peptidoglycan layer in the presence of 10-20% sucrose , the cell

    with CM is

    called: spheroplast - Gram-negative bacteria

    protoplast Gram-positive bacteria

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    Cell Wall

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    -it secretes extracellular hydrolytic

    enzymes

    - it ensures the segregation of nuclear matl

    (DNA) to daughter cells during division

    - it controls the transport of mostcompounds entering and leaving the cell

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    Structure and Chemical Composition of CM

    -approx 7.5 nm thick

    -composed of phospholipid (20-30%) andproteins (50-70%)

    -fluid-mosaic model

    -semipermeable

    -contains specific proteins called permeases

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    diff sion and osmosis occ rs across the c toplasmic

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    -diffusion and osmosis occurs across the cytoplasmic

    membrane

    Internal Cell Structures

    -material contained wiithin the cytoplasmic membranemay be divided into:

    1. the cytoplasmic area the fluid portion contg. dissol-

    ved substances and particles such as ribosomes

    2. nuclear material or nucleoidrich in the geneticmaterial DNA

    Cytoplasmic area-consists of of about 80% water

    -aside from water, NA, proteins, CHO, lipids, inorganicions, many low-mol weight cpds and particles w/

    various functions

    - no evidence that it has cytoskeleton unlike in

    eukaryotes

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    Cytoplasmic inclusions Where found Composition Function

    Table 8. Some inclusions in bacterial cells.

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    y p p

    glycogenmany bacteria e.g. E.coli

    polyglucosereserve carbon andenergy source

    polybetahydroxyutyricacid (PHB)

    many bacteria e.g.Pseudomonas

    polymerized hydroxybutyrate

    reserve carbon andenergy source

    polyphosphate (volutingranules)

    many bacteria e.g.Corynebacterium

    linear or cyclicalpolymers of PO4

    reserve phosphate;possibly a reserve ofhigh energy phosphate

    sulfur globules

    phototrophic purpleand green sulfurbacteria andlithotrophic colorlesssulfur bacteria

    elemental sulfur

    reserve of electrons(reducing source) inphototrophs; reserveenergy source inlithotrophs

    gas vesiclesaquatic bacteriaespeciallycyanobacteria

    protein hulls or shellsinflated with gases

    buoyancy (floatation)in the vertical watercolumn

    parasporal crystalsendospore-formingbacilli (genus Bacillus)

    proteinunknown but toxic tocertain insects

    magnetosomes certain aquatic bacteriamagnetite (iron oxide)Fe3O4

    orienting andmigrating along geo-

    magnetic field lines

    carboxysomesmany autotrophicbacteria

    enzymes forautotrophic CO2fixation

    site of CO2 fixation

    phycobilisomes cyanobacteria phycobiliproteinslight-harvestingpigments

    chlorosomes Green bacterialipid and protein and

    bacteriochlorophyll

    light-harvesting

    pigments and antennae

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    c. Sulfur globules found in H2S-oxidizing bacteria

    d. Volutin granules (metachromatic granules)-made of

    polyphosphates

    -reddish color when stained with methylene

    blue

    -appear round

    Chromatophores-special membrane system found in certain

    photosyhnthetic bacteria and cyanobacteria

    -lacks chloroplasts

    Nuclear area

    -lacks nucleus

    -nuclear matl in a bacterial cell occupies a position

    near the center of the cell

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    Figure 3. A variety of bacterial inclusions. a. PHB

    granules; b. a parasporal BT crystal in the sporangium ofBacillus thuringiensis; c. carboxysomes inAnabaenaviriabilis, showing their polyhedral shape; d. sulfurglobules in the cytoplasm ofBeggiatoa.

    seems to be attached to the mesosome cytoplasmic

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    -seems to be attached to the mesosome-cytoplasmic

    membrane system

    -total nuclear material called the nucleoid consists of a

    single, circular chromosome

    Plasmids

    -relatively small, circular pieces of double-stranded

    DNAwhich exist separately from the bacterial

    chromosome

    - capable of autonomous replication and encode

    for many auxiliary functions (antibiotic resistance) not

    necessary for bacterial growth

    -can be transferred from 1 bacterium to another thruconjugation or thru lab manipulation. (recombinant

    DNA technology)

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    Dormant Forms of Prokaryotic Microorganisms

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    Dormant Forms of Prokaryotic Microorganisms

    -some species of bacteria produce dormant forms

    called: spores and cysts

    -can survive unfavorable conditions such as dryingor heat

    -resting forms (metabolically inactive) but in favora-

    ble conditions they can germinate and become

    metabolically active vegetative cells (grow andmultiply)

    Spores

    -only two genera of medical importance, Bacillusand

    Clostridium have the ability to developed specialized struc-tures called endospore.

    -form within the cell

    -thick-walled, highly refractile and highly resistant to

    environmental changes

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    Gross Morphological Characteristics of

    Eukaryotic Microorganisms

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    Molds

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    -multicellular organisms that look like filaments under low

    magnification

    -with high magnification, they look like tiny jungles-the body (thallus)

    -consists of the mycelium (mycelia) and dormant

    spores

    -each mycelium is a mass of filaments called hyphae

    Hypha

    -about 5-10 um in width and is formed by joining to-

    gether of many cells

    -rigid walls of hyphae are made of chitins, celluloses

    and glucans-maybe classified as

    1. coenocyticdo not have septa(crosswalls bet the

    cells that make up a long filament)

    -contains many nuclei

    2 septate have septa that divide the filaments into

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    2. septate have septa that divide the filaments intodistinct cells containing nuclei

    *there is a pore in each septum that allows cytoplasm andnuclei to migrate between cells

    A hypha grows by elongation at its tip and each fragment

    that contains nuclei is capable of growing into a new

    organism

    -some hyphae are embedded in solid media such asbread or soil to give the thallus support and nourishment

    (rhizoids-specialized hyphae since they are rootlike)

    Reproductive hyphae may grow upward into the air to disse-minate the spores they produce.

    Vegetative hyphae- hyphae with no specialized division of

    labor may simply grow along the surface of the substrate

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    Germ tube

    -a short, hyphalike

    extension that soon

    Grows into a thallus

    th h h b i d i t l t t

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    -other hyphae can become organized into large structures

    to form the so called fleshy fungi, such as mushrooms,

    puffballs, and bracket fungi.

    Many fungi exhibit dimorphism (existing either in a unice-

    llular, yeastlike form or in a filamentous form)

    Present when the

    organism is parasiteWhen the organism is a

    saprophyte in its natural

    habitat (such as soil) or onlab media incubated at rm T

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    Morphology of Algae

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    - are of many sizes and shapes

    -species range from single microscopic cells to orgs

    hundreds of feet long

    -Singlecelled species may be:

    1. spherical

    2. rod-shaped

    3. club-shaped

    4. spindle-shaped-some maybe motile

    -Multicellular

    -some organized as filaments of cells attached end to end

    -in some species these filaments intertwine into microscopicplantlike bodies

    -occur in colonies, some of which are simple aggregations of

    single cells, while others contain different cell types with

    special functions

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    -structurally and functionally more complex

    th ti fl ll d ili

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    than procaryotic flagella and cilia

    -composed of thin, hairlike

    microtubules: 9 + 2 arrangement (9 pairsof these tubules encircle a central pair )

    -shaft formed by the microtubules

    Is wrapped in a membrane

    Differences bet eucaryotic and procaryo

    -tic flagella1. movement is powered by the

    hydrolysis of the chemical cpd

    ATP for the eucaryotes while for

    procaryotic flagella, the energy tomove it comes from the proton

    motive force(the movement of

    hydrogen ions across the CM)

    2. Differ also in the way they move the cell

    *eucaryotic flagellum-propels the cell by acting

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    eucaryotic flagellum propels the cell by acting

    like a whip, bending and twisting against the

    liquid environment

    *procaryotic flagellum-moves the cell by rotatinglike a corkscrew

    Pseudopodia

    -specialized structures as mode of locomotion by

    some protozoans

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    -a pseudopodium is a temporary projection of part of

    th t l d t l i b hi h i d

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    the cytoplasm and cytoplasmic membrane which is caused

    by cytoplasmic streaming

    -characteristics of amoebas

    -maybe used to capture food particles

    Cell Walls

    -plants, algae and fungi have cell walls

    -maintains the shape of cells and prevents them frombursting through osmotic pressure

    -cell walls of plants, algae, and fungi differ from one

    another and from bacterial cell walls in chemical

    composition and physical structure-protozoa lack cell wall but some are surrounded by

    a layer of shell-like matl (may fit tightly or form a

    loose chamber in which the organism moves)

    *scales or spines may be present

    Table 4. Differences in the cell wall compositions of eucaryotes

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    Organism Chem. composition

    Plant Rigid; mainly polysaccharides

    (cellulose and pectin)

    Filamentous fungi Chitin and cellulose

    Unicellular yeast Polysaccharide mannan (polymer of

    the monosaccharide mannose)

    algae Varying amounts of cellulose, other

    polysaccharides and calcium

    carbonate

    -the walls of diatoms (algae)

    *impregnated with silica making them thick & rigid

    *surfaces often delicately sculptured with intricate

    designs characterictic of the species

    Cytoplasmic membrane

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    -eucaryotes CM have sterols while that of

    procaryotes generally does not

    Cellular Organelles

    -inside the the CM is the protoplasm

    Protoplasm is divided into:

    a. Karyoplasm- the material inside the nuclear

    membrane

    b. Cytoplasm- the material between the nuclear

    membrane and CM.

    -where organelles are found

    -has cytoskeleton (network of microtubulesand proteins)

    *provides shape and support

    *serves as framework along which

    organelles move thru the cytoplasm

    Nucleus

    - many protozoan have multiple nuclei thruout the

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    many protozoan have multiple nuclei thruout the

    greater part of their life cyle.

    - in ciliated microorganisms, there are two nuclei:

    1. macronucleus- large nucleus- controls metabolic activities, growth and

    regeneration

    2. micronucleus- small nucleus

    - controls reproductive activities

    Chloroplast

    algae have another energy generating cytoplasmic

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    - algae have another energy-generating cytoplasmic

    organelle

    -site of photosynthetic reactions(light is used to con-

    vert energy for the cell)

    -a cucumber-shaped body (2 to 3 um wide, 5 to 10 um

    long) surrounded by a double membrane

    Stroma- the interior

    - where DNA(circular, like procaryotic DNA)codes for proteins on the chloroplast

    ribosomes and for the enzymes needed

    to use carbon dioxide from the air.

    Thylakoids- stacks of disk-shaped or ribbonlike sacswhich contain the chlorophyll and caro-

    tenoid pigments that function in photo-

    synthesis

    Grana- each stalk is called granum

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    Dormant Forms of Eucaryotic Microorganisms

    -some microorganisms can produced dormant forms

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    some microorganisms can produced dormant forms

    called spores and cyts that can withstand unfavorable

    conditions

    -both fungi and protozoa use such resting structuresfor protection and reproduction

    -algae also form spores but their main function is for

    reproduction. Algae do not form cyts.

    Spores

    -fungi produce both sexual and asexual spores

    A. Sexual spores

    -produced as a result of the fusion of two

    specialized reproductive cells called gametes

    into one fertilized cell.

    -produced less frequently and in smaller numbers

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    B. Asexual spores

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    -does not involve the fusion of gametes

    -each thallus can produce hundreds of thousands of

    asexual spores, produced by aerial hyphae-purpose is to dessiminate the species, and are

    specially structured for dispersion from the mother

    thallus

    *spores of aquatic fungi-may be motile in water

    *spores of soil fungi-may have thick coats to

    withstand drying or may be light enough

    to travel on air currents

    -usually white when 1st produced but they turn a cha-

    racteristic color with age.-eg. Peniciliium notatum-colonies blue-green

    Aspergillus niger- black

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    Cysts

    -resting forms produce by many protozoa

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    resting forms produce by many protozoa

    - 2 possible forms of protozoan cyts:

    a. Protective cyst

    b. Reproductive cyst

    Trophozoites

    -the vegetative forms of protozoa

    -synthesize protective cysts that are resistant to drying,

    lack of food, lack of oxygen, or acidity in the hostsstomach. (when conditions once again become favora-

    rable, cysts form trophozoites that feed and grow.

    Reproductive cyst- not induced by adverse environmental

    conditions-often thin-walled and lack the resistance of protective

    cysts

    *parasitic species of protozoa often move from host to

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    parasitic species of protozoa often move from host to

    host as cysts(mode of transmission)

    -form in the intestinal tract and are excreted in

    feces which contaminate water and food ingested

    by next host.

    *CYST is the only way to survive outside the host.

    e.g. Giardia lamblia -causative agent of diarrhea

    and abdominal cramps in humans-transmitted to humans by cysts

    in water supplies contaminated with feces

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    THANK YOU for listening!