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This is a software tutorial for COMSOL Multiphysics simulation software
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Multiphysics Simulations in BioHeating and BioTechnology
John Dunec, Ph.D. COMSOL
Copyright 2014 COMSOL. COMSOL, COMSOL Multiphysics, Capture the Concept, COMSOL Desktop, and LiveLink are either registered trademarks or trademarks of COMSOL AB. Excel, Microsoft, and Windows are either registered trademarks or trademarks of Microsoft Corporation in the United States and/or other countries. All other trademarks are the property of their respective owners, and COMSOL AB and its subsidiaries and products are not affiliated with, endorsed by, sponsored by, or supported by those trademark owners. For a list of such trademark owners, see www.comsol.com/trademarks
Agenda BioHeating and BioTechnology Introduction BioHeating Examples using COMSOL Low Frequency Joule Heating High Frequency Microwave Heating Chemical Heating Acoustic Heating Tissue Damage Simulation
Other Bio Examples Step-by-Step Demo: Low Frequency Cancer Therapy
Multiphysics: Multiple Interacting Phenomena
Could be simple: Heat convected by Flow
Could be complex: Local temperature sets
reaction rates Multiple exothermic
reactions Convected by flow in pipes
and porous media Viscosity strongly
temperature dependent
COMSOL Multiphysics Solves These!
Multiphysics Everything can link to everything. Flexible You can model just about anything.
Usable You can keep your sanity doing it.
Extensible If its not specifically thereadd it!
Trusted by 90,000+ Users Worldwide
Anywhere you can type a number you can type an equation
Or an interpolation function And it can depend on anything known in your problem
Example: Concentration-dependant viscosity:
( )221001.0 c+=
Low concentration, High velocity
High concentration, Low velocity
COMSOL Multiphysics 4.4 Product Suite
Examples: Low Frequency Joule Heating
100 sec
300 sec
Necrosis Boundary
IsoTherms Voltage Equipotential
Two Physics Involved
Select Two Individual Physics Electric Currents - and - Heat Transfer Or One Coupled Multiphysics Heat Transfer >
EM Heating > Joule Heating
Two Methods: RMS DC or True 1.2 KHz AC
Recall: RMS value of an AC signal is AC Magnitude divided by the square root of 2
31 volts AC at 1200 Hz Equivalent to 22 volts RMS DC
2AC
RMSDCVV =
Two Physics
Arte
ry
Insu
late
d
T=T b
lood
on
Surfa
ces
Electromagnetics
Heat Transfer
Link Electrical Power Loss to Heat Source
BioHeat Equation
Electrical Heat Source Coupling
( ) ( ) Electricalmetabolicbbbbp QQTTCTkdtdTC +++=
Time-varying electromagnetic field E* is Complex Conjugate of E
{ }*Re21 EJ
EJ
=
=
RMSAC
DC
Q
Q
Solve for EM and Heat
IsoTherms (600 sec) Voltage Isopotentials
Examples: High Frequency RF Heating
E-Field Temperature
Necrosis Boundary
Geometry
Geometry Liver Tissue
Insulated Catheter
CoAxial Cable inside
Catheter
Slit in Coax Shielding to emit waves
Metalize end to reflect waves
Use 2D Symmetry
Slit in CoAx. Shielding C
oAxi
al
Cath
eter
Metalize end of CoAx Dielectric
Two Physics Involved
Select Two Individual Physics Electromagnetic Waves - and - Heat Transfer Or One Coupled Multiphysics Heat Transfer >
EM Heating > Microwave Heating
Two Physics
CoAx
ial C
athe
ter:
PEC
Live
r Tis
sue
Slit
Scattering Boundary Scattering Boundary
Scattering Boundary
CoAx
Die
lect
ric
CoAxial Port
CoAx
ial C
athe
ter:
Insu
late
d Liver
Tissue with
Capillary Perfusion T = T
blood
T = Tblood
T = Tblood
Electromagnetics
Heat Transfer Co
Axia
l Cat
hete
r: In
sula
ted
Link Electrical Power Loss to Heat Source
BioHeat Equation
Electrical Heat Source Coupling
( ) ( ) Electricalmetabolicbbbbp QQTTCTkdtdTC +++=
Time-varying electromagnetic field E* is Complex Conjugate of E H* is Complex Conjugate of H
{ }*HBEJ += jQElectrical *Re21
Mesh for Waves
Frequency = 2.45[GHz] 10 DOF / wavelength 2nd Order Elements Max Elem Size = 3 mm
Make even finer in CoAx
dielectric
Set Frequency (2.45 GHz) and Solve
E-Field Temperature IsoTherms
Example: Hip Replacement
PMMA (Polymethyl methacrylate) is an acrylic cement mixed with powdered bone
Curing reaction is exothermic Potential Problems Thermal osteonecrosis if
temperature rise is too high
Polymer shrinking and void formation
Heat from Curing
Reaction After 700 sec
PMM
A Cement
Temperature After 700 sec
COMSOL Implementation Two (possibly 3) Physics Bioheat Transfer with Damage Integral Reaction ODE (or Diffusion Equa) (Structural Equation with Thermal Expansion)
Three Domains Live Bone Cement Metal
Reaction Dynamics
Cure polymerization reaction is
As a lumped-mass (no diffusion) reaction this is expressed as
Where is the normalized concentration of hardened form B
hardenedk
liquid BA
curedfully 1liquid all0
==
( ) ( )nmRTEeKt
= 1/0
Alpha at T=700 sec
Heat Transfer
Reaction heat proportional to reaction rate
This is a source term in the Bioheating equation
rreactionexothermic qQ =
( ) ( ) Reactionmetabolicbbbbp QQTTCTkTC +++==
0 since 0 u
u
Qreaction at t = 700 sec Temperature at t = 700 sec
Link Reaction Heat to Heat Transfer
Add Heat Source Term to Heat Transfer in Cement Domain
rreactionexothermic qQ =
Solve as Transient for 1600 seconds
Temperature of MidPoint vs Time
Example: Focused Ultrasound Heating
High-Intensity Focused Ultrasound (HIFU) uses sonic energy to heat damaged or diseased tissue (For Example: Uterine fibroids)
Temperature Rise after 1 sec Sound Intensity (dB)
Geometry
Spherical Focusing Transducer Tissue immersed in Water 2D Axisymmetric Tissue
Water
PML
PML
Perfectly Matched Layer
Water
1st of Two Physics: Pressure Acoustics
Pressure Acoustics Setup PMLs Absorb Waves
Axial Symmetry
Set pressure on
Transducer Boundary
Tissue
Water
PML
PML
Perfectly Matched Layer
2nd of Two Physics: BioHeat Transfer
BioHeat Setup Solve only in Tissue (Here
without perfusion)
Outer Boundaries Water Temperature
Axial Symmetry Infinite Elements Heat Source from Sound
Tissue
Not Included in Heat Calc.
Inf Elem Infinite Element Dom
ain
Twater
Twater
Tw
ater
Link Sound Losses to Heat Source Gain
Pressure Acoustics: Include attenuation Set absorption, alpha
Bioheat Equation Add a heat source Use sound intensity and
absorption coef, alpha
]/[
23mWatt
IQsound =
Mesh to Support 10 GHz Sound Waves Wavelength = 1.483 mm 10 DOF / wavelength 2nd & 4th Order Elements Max Elem Size = 1.483 / 5
Make even finer at focus
135,000 elements
Solve (Frequency & Time Domain)
Temperature Rise after 1 sec Sound Intensity (dB)
Response to Acoustic Transducer Pressure: 1 MPa
Details 1 sec
Temperature Rise Along Vertical symmetry axis
Temperature Contours Near Acoustic Focus
Calculating Damage Based on Temperature Included in Biological Tissue (with Heat Transfer Module)
100 sec
Isotherms and Necrosis Boundary after 600 sec
Isotherms and Necrosis Boundary After 100 & 300 sec
300 sec
600 sec
Damage Equations 2 Approaches
Time Above Temperature: T > 50C for at least 50 sec
dtCTTimeAbovet
)50(500
>= dtAet
RTE
=
0
Energy Based (Ref Below) Energy Absorption
0 ,11)(
==
bloodAteTissueDeadPercent
secondsTimeAbove 5050
(Ref) Isaac Chang and Uyen Nguyen, Thermal modeling of lesion growth with radiofrequency ablation devices, BioMedical Engineering OnLine, 2004, 3:27, August 6, 2004. http://www.biomedical-engineering-online.com/content/3/1/27
100 sec
Example: Fluid Structure Interaction
Heart Mitral Valve Flow moves structure Mesh informs flow
Simulation of Blood Flow through the Mitral Valve of the Heart: A Fluid Structure Interaction Model. D.M. Espino, M. A. Watkins, D. Shepherd, D. L. Hukins & K G. Buchan COMSOL 2006 Conference
Stent Expansion
Plastic deformation upon catheter balloon inflation
Very Nonlinear Elasto-plastic Large deformation
Possible Extensions Contact analysis with blood
vessel walls Export deformed geometry Convection-diffusion of
antirejection coating
Plastic Strain
Geometry
Dog-boning / Foreshortening vs Pressure
Von Mises Stress Deflection
Antirejection Coating Convection-Diffusion
Diffusion in tissue Convection in blood
Measure flux to calculate
lifespan of coating
Worked Example: Joule Heating Here with 22 volt RMS DC
100 sec
300 sec
Necrosis Boundary
IsoTherms Voltage Equipotential
Arte
ry
Cath
eter
IsoPotential
Video Demo
Please wait while the content is loading
100 sec
IsoTherms Voltage Equipotential
Tissue Necrosis Boundary
Try COMSOL Multiphysics
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COMSOL Multiphysics 4.4 Product Suite
Multiphysics Simulations in BioHeating and BioTechnologyAgenda BioHeating and BioTechnologyMultiphysics: Multiple Interacting PhenomenaCOMSOL Multiphysics Solves These!Anywhere you can type a number you can type an equationCOMSOL Multiphysics 4.4 Product SuiteExamples: Low Frequency Joule HeatingTwo Physics InvolvedTwo Methods: RMS DC or True 1.2 KHz ACTwo PhysicsLink Electrical Power Loss to Heat SourceSolve for EM and HeatExamples: High Frequency RF HeatingGeometryTwo Physics InvolvedTwo PhysicsLink Electrical Power Loss to Heat SourceMesh for WavesSet Frequency (2.45 GHz) and SolveExample: Hip ReplacementCOMSOL ImplementationReaction DynamicsHeat TransferLink Reaction Heat to Heat TransferSolve as Transient for 1600 secondsExample: Focused Ultrasound HeatingGeometry1st of Two Physics: Pressure Acoustics2nd of Two Physics: BioHeat TransferLink Sound Losses to Heat Source GainMesh to Support 10 GHz Sound WavesSolve (Frequency & Time Domain)Details 1 secCalculating Damage Based on TemperatureDamage Equations 2 ApproachesExample: Fluid Structure InteractionStent ExpansionDog-boning / Foreshortening vs PressureAntirejection Coating Convection-DiffusionWorked Example: Joule Heating Here with 22 volt RMS DCVideo DemoTry COMSOL MultiphysicsContact UsQ&A SessionCOMSOL Multiphysics 4.4 Product Suite