Bioheating Tutorial for COMSOL Multiphysics software

Embed Size (px)

DESCRIPTION

This is a software tutorial for COMSOL Multiphysics simulation software

Citation preview

  • Multiphysics Simulations in BioHeating and BioTechnology

    John Dunec, Ph.D. COMSOL

    Copyright 2014 COMSOL. COMSOL, COMSOL Multiphysics, Capture the Concept, COMSOL Desktop, and LiveLink are either registered trademarks or trademarks of COMSOL AB. Excel, Microsoft, and Windows are either registered trademarks or trademarks of Microsoft Corporation in the United States and/or other countries. All other trademarks are the property of their respective owners, and COMSOL AB and its subsidiaries and products are not affiliated with, endorsed by, sponsored by, or supported by those trademark owners. For a list of such trademark owners, see www.comsol.com/trademarks

  • Agenda BioHeating and BioTechnology Introduction BioHeating Examples using COMSOL Low Frequency Joule Heating High Frequency Microwave Heating Chemical Heating Acoustic Heating Tissue Damage Simulation

    Other Bio Examples Step-by-Step Demo: Low Frequency Cancer Therapy

  • Multiphysics: Multiple Interacting Phenomena

    Could be simple: Heat convected by Flow

    Could be complex: Local temperature sets

    reaction rates Multiple exothermic

    reactions Convected by flow in pipes

    and porous media Viscosity strongly

    temperature dependent

  • COMSOL Multiphysics Solves These!

    Multiphysics Everything can link to everything. Flexible You can model just about anything.

    Usable You can keep your sanity doing it.

    Extensible If its not specifically thereadd it!

    Trusted by 90,000+ Users Worldwide

  • Anywhere you can type a number you can type an equation

    Or an interpolation function And it can depend on anything known in your problem

    Example: Concentration-dependant viscosity:

    ( )221001.0 c+=

    Low concentration, High velocity

    High concentration, Low velocity

  • COMSOL Multiphysics 4.4 Product Suite

  • Examples: Low Frequency Joule Heating

    100 sec

    300 sec

    Necrosis Boundary

    IsoTherms Voltage Equipotential

  • Two Physics Involved

    Select Two Individual Physics Electric Currents - and - Heat Transfer Or One Coupled Multiphysics Heat Transfer >

    EM Heating > Joule Heating

  • Two Methods: RMS DC or True 1.2 KHz AC

    Recall: RMS value of an AC signal is AC Magnitude divided by the square root of 2

    31 volts AC at 1200 Hz Equivalent to 22 volts RMS DC

    2AC

    RMSDCVV =

  • Two Physics

    Arte

    ry

    Insu

    late

    d

    T=T b

    lood

    on

    Surfa

    ces

    Electromagnetics

    Heat Transfer

  • Link Electrical Power Loss to Heat Source

    BioHeat Equation

    Electrical Heat Source Coupling

    ( ) ( ) Electricalmetabolicbbbbp QQTTCTkdtdTC +++=

    Time-varying electromagnetic field E* is Complex Conjugate of E

    { }*Re21 EJ

    EJ

    =

    =

    RMSAC

    DC

    Q

    Q

  • Solve for EM and Heat

    IsoTherms (600 sec) Voltage Isopotentials

  • Examples: High Frequency RF Heating

    E-Field Temperature

    Necrosis Boundary

    Geometry

  • Geometry Liver Tissue

    Insulated Catheter

    CoAxial Cable inside

    Catheter

    Slit in Coax Shielding to emit waves

    Metalize end to reflect waves

    Use 2D Symmetry

    Slit in CoAx. Shielding C

    oAxi

    al

    Cath

    eter

    Metalize end of CoAx Dielectric

  • Two Physics Involved

    Select Two Individual Physics Electromagnetic Waves - and - Heat Transfer Or One Coupled Multiphysics Heat Transfer >

    EM Heating > Microwave Heating

  • Two Physics

    CoAx

    ial C

    athe

    ter:

    PEC

    Live

    r Tis

    sue

    Slit

    Scattering Boundary Scattering Boundary

    Scattering Boundary

    CoAx

    Die

    lect

    ric

    CoAxial Port

    CoAx

    ial C

    athe

    ter:

    Insu

    late

    d Liver

    Tissue with

    Capillary Perfusion T = T

    blood

    T = Tblood

    T = Tblood

    Electromagnetics

    Heat Transfer Co

    Axia

    l Cat

    hete

    r: In

    sula

    ted

  • Link Electrical Power Loss to Heat Source

    BioHeat Equation

    Electrical Heat Source Coupling

    ( ) ( ) Electricalmetabolicbbbbp QQTTCTkdtdTC +++=

    Time-varying electromagnetic field E* is Complex Conjugate of E H* is Complex Conjugate of H

    { }*HBEJ += jQElectrical *Re21

  • Mesh for Waves

    Frequency = 2.45[GHz] 10 DOF / wavelength 2nd Order Elements Max Elem Size = 3 mm

    Make even finer in CoAx

    dielectric

  • Set Frequency (2.45 GHz) and Solve

    E-Field Temperature IsoTherms

  • Example: Hip Replacement

    PMMA (Polymethyl methacrylate) is an acrylic cement mixed with powdered bone

    Curing reaction is exothermic Potential Problems Thermal osteonecrosis if

    temperature rise is too high

    Polymer shrinking and void formation

    Heat from Curing

    Reaction After 700 sec

    PMM

    A Cement

    Temperature After 700 sec

  • COMSOL Implementation Two (possibly 3) Physics Bioheat Transfer with Damage Integral Reaction ODE (or Diffusion Equa) (Structural Equation with Thermal Expansion)

    Three Domains Live Bone Cement Metal

  • Reaction Dynamics

    Cure polymerization reaction is

    As a lumped-mass (no diffusion) reaction this is expressed as

    Where is the normalized concentration of hardened form B

    hardenedk

    liquid BA

    curedfully 1liquid all0

    ==

    ( ) ( )nmRTEeKt

    = 1/0

    Alpha at T=700 sec

  • Heat Transfer

    Reaction heat proportional to reaction rate

    This is a source term in the Bioheating equation

    rreactionexothermic qQ =

    ( ) ( ) Reactionmetabolicbbbbp QQTTCTkTC +++==

    0 since 0 u

    u

    Qreaction at t = 700 sec Temperature at t = 700 sec

  • Link Reaction Heat to Heat Transfer

    Add Heat Source Term to Heat Transfer in Cement Domain

    rreactionexothermic qQ =

  • Solve as Transient for 1600 seconds

    Temperature of MidPoint vs Time

  • Example: Focused Ultrasound Heating

    High-Intensity Focused Ultrasound (HIFU) uses sonic energy to heat damaged or diseased tissue (For Example: Uterine fibroids)

    Temperature Rise after 1 sec Sound Intensity (dB)

  • Geometry

    Spherical Focusing Transducer Tissue immersed in Water 2D Axisymmetric Tissue

    Water

    PML

    PML

    Perfectly Matched Layer

    Water

  • 1st of Two Physics: Pressure Acoustics

    Pressure Acoustics Setup PMLs Absorb Waves

    Axial Symmetry

    Set pressure on

    Transducer Boundary

    Tissue

    Water

    PML

    PML

    Perfectly Matched Layer

  • 2nd of Two Physics: BioHeat Transfer

    BioHeat Setup Solve only in Tissue (Here

    without perfusion)

    Outer Boundaries Water Temperature

    Axial Symmetry Infinite Elements Heat Source from Sound

    Tissue

    Not Included in Heat Calc.

    Inf Elem Infinite Element Dom

    ain

    Twater

    Twater

    Tw

    ater

  • Link Sound Losses to Heat Source Gain

    Pressure Acoustics: Include attenuation Set absorption, alpha

    Bioheat Equation Add a heat source Use sound intensity and

    absorption coef, alpha

    ]/[

    23mWatt

    IQsound =

  • Mesh to Support 10 GHz Sound Waves Wavelength = 1.483 mm 10 DOF / wavelength 2nd & 4th Order Elements Max Elem Size = 1.483 / 5

    Make even finer at focus

    135,000 elements

  • Solve (Frequency & Time Domain)

    Temperature Rise after 1 sec Sound Intensity (dB)

    Response to Acoustic Transducer Pressure: 1 MPa

  • Details 1 sec

    Temperature Rise Along Vertical symmetry axis

    Temperature Contours Near Acoustic Focus

  • Calculating Damage Based on Temperature Included in Biological Tissue (with Heat Transfer Module)

    100 sec

    Isotherms and Necrosis Boundary after 600 sec

    Isotherms and Necrosis Boundary After 100 & 300 sec

    300 sec

    600 sec

  • Damage Equations 2 Approaches

    Time Above Temperature: T > 50C for at least 50 sec

    dtCTTimeAbovet

    )50(500

    >= dtAet

    RTE

    =

    0

    Energy Based (Ref Below) Energy Absorption

    0 ,11)(

    ==

    bloodAteTissueDeadPercent

    secondsTimeAbove 5050

    (Ref) Isaac Chang and Uyen Nguyen, Thermal modeling of lesion growth with radiofrequency ablation devices, BioMedical Engineering OnLine, 2004, 3:27, August 6, 2004. http://www.biomedical-engineering-online.com/content/3/1/27

    100 sec

  • Example: Fluid Structure Interaction

    Heart Mitral Valve Flow moves structure Mesh informs flow

    Simulation of Blood Flow through the Mitral Valve of the Heart: A Fluid Structure Interaction Model. D.M. Espino, M. A. Watkins, D. Shepherd, D. L. Hukins & K G. Buchan COMSOL 2006 Conference

  • Stent Expansion

    Plastic deformation upon catheter balloon inflation

    Very Nonlinear Elasto-plastic Large deformation

    Possible Extensions Contact analysis with blood

    vessel walls Export deformed geometry Convection-diffusion of

    antirejection coating

    Plastic Strain

    Geometry

  • Dog-boning / Foreshortening vs Pressure

    Von Mises Stress Deflection

  • Antirejection Coating Convection-Diffusion

    Diffusion in tissue Convection in blood

    Measure flux to calculate

    lifespan of coating

  • Worked Example: Joule Heating Here with 22 volt RMS DC

    100 sec

    300 sec

    Necrosis Boundary

    IsoTherms Voltage Equipotential

    Arte

    ry

    Cath

    eter

    IsoPotential

  • Video Demo

    Please wait while the content is loading

    100 sec

    IsoTherms Voltage Equipotential

    Tissue Necrosis Boundary

  • Try COMSOL Multiphysics

    North America New York, NY Reno, NV Hanover, NH Atlanta, GA Baltimore, MD Independence, OH Toronto, ON Plano, TX Norman, OK Milwaukee, WI

    Europe Freiberg, Germany Salerno, Italy Siegen, Germany Guildford, United Kingdom Troms, Norway Pilsen, Czech Republic Helsinki, Finland

    Register for our free hands-on workshops at www.comsol.com/events

  • Contact Us www.comsol.com

    User Stories Videos Model Gallery Discussion Forum Blog Product News

    [email protected] General inquiries

    [email protected] Technical support

  • Q&A Session

  • COMSOL Multiphysics 4.4 Product Suite

    Multiphysics Simulations in BioHeating and BioTechnologyAgenda BioHeating and BioTechnologyMultiphysics: Multiple Interacting PhenomenaCOMSOL Multiphysics Solves These!Anywhere you can type a number you can type an equationCOMSOL Multiphysics 4.4 Product SuiteExamples: Low Frequency Joule HeatingTwo Physics InvolvedTwo Methods: RMS DC or True 1.2 KHz ACTwo PhysicsLink Electrical Power Loss to Heat SourceSolve for EM and HeatExamples: High Frequency RF HeatingGeometryTwo Physics InvolvedTwo PhysicsLink Electrical Power Loss to Heat SourceMesh for WavesSet Frequency (2.45 GHz) and SolveExample: Hip ReplacementCOMSOL ImplementationReaction DynamicsHeat TransferLink Reaction Heat to Heat TransferSolve as Transient for 1600 secondsExample: Focused Ultrasound HeatingGeometry1st of Two Physics: Pressure Acoustics2nd of Two Physics: BioHeat TransferLink Sound Losses to Heat Source GainMesh to Support 10 GHz Sound WavesSolve (Frequency & Time Domain)Details 1 secCalculating Damage Based on TemperatureDamage Equations 2 ApproachesExample: Fluid Structure InteractionStent ExpansionDog-boning / Foreshortening vs PressureAntirejection Coating Convection-DiffusionWorked Example: Joule Heating Here with 22 volt RMS DCVideo DemoTry COMSOL MultiphysicsContact UsQ&A SessionCOMSOL Multiphysics 4.4 Product Suite