Ch 3 - Cell Level of Organization Part

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    Chapter 3: The Cell

    Cell theory?

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    2 Types of Cells

    Sex cells(germ cells):

    reproductive cells

    male sperm

    female oocytes(eggs)

    Sex Cells Somatic Cells

    Somatic cells(soma

    = body):

    all body cells except

    sex cells

    Difference?

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    Organelle Functions

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    Organelle Functions

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    What are the structu res and

    funct ions of the cel l membrane?

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    Components of the Cell Membrane

    Contains lipids, carbohydrates, and functional proteins

    Phospholipid Bilayer

    Double layer of phospholipid molecules:

    hydrophilic headstoward watery environment,

    both sides hydrophobic fatty-acid tailsinside membrane

    barrier to ions and water soluble compounds

    Membrane Proteins

    Integral proteins:

    within the membrane

    Peripheral proteins:

    inner or outer surface of the membrane

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    6 Functions of Membrane Proteins1. Anchoring proteins(stabilizers):

    attach to inside or outside structures

    2. Recognition proteins(identifiers):

    label cells normal or abnormal

    3. Enzymes: catalyze reactions

    4. Receptor proteins:

    bind and respond to ligands(ions, hormones)

    5. Carrier proteins: transport specific solutes through membrane

    6. Channels:

    regulate water flow and solutes through membrane

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    Membrane CarbohydratesProteoglycans, glycoproteins, and glycolipids:

    extend outside cell membrane form sticky sugar coat (glycocalyx)

    Functions of Membrane Carbohydrates

    Lubrication and protectionAnchoring and locomotion

    Specificity in binding (receptors)

    Recognition (immune response)

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    CytoplasmAll materials inside the cell and outside the

    nucleus:

    cytosol(fluid):

    dissolved materials:

    nutrients, ions, proteins, and waste products

    organelles:structures with specific functions

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    What are cel l organel les & their func t ions?

    Types of OrganellesNonmembranous organelles:

    Do not possess a membrane

    In direct contact with cytosol

    Membranous organelles:

    covered with plasma membrane

    isolated from cytosol6 types of nonmembranousorganelles:

    cytoskeleton

    microvilli

    centrioles

    cilia

    ribosomes

    proteasomes

    C

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    The CytoskeletonStructural proteinsfor shape andstrength

    3 types (microfilaments,intermediate, and Microtubules

    Microfilaments Thin filamentscomposed of the

    protein actin:provide additional mechanical strength

    Pairs with thick filamentsof myosinformuscle movement

    Intermediate Mid-sized

    durable (collagen)

    strengthen cell and maintain shape

    stabilize organelles

    stabilize cell position

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    MicrovilliIncrease surface area for absorption

    Attach to cytoskeleton

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    Centriolesin the Centrosome

    Centriolesform spindle

    apparatusduring celldivision

    Centrosome: cytoplasm

    surrounding centriole

    CiliaCilia move fluids across thecell surface

    Rib

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    RibosomesBuild polypeptides in protein

    synthesis

    Two types:

    free ribosomesin cytoplasm:

    proteins for cell

    fixed ribosomesattached toER:

    proteins for secretion

    ProteasomesContain enzymes (proteases)

    Disassemble damaged proteins for recycling

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    Membranous Organelles6 membranousorganelles:

    endoplasmic reticulum (ER) golgi apparatus

    lysosomes

    peroxisomes

    mitochondria

    nucleus

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    Endoplasmic Reticulum (ER)endo= within,plasm= cytoplasm, reticulum= network

    Cisternaeare storage chambers within membranes

    2 types

    Synthesisof proteins, carbohydrates, and lipids

    Storageof synthesized molecules and materials

    Transportof materials within the ER

    Detoxificationof drugs or toxins

    Functions of ER

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    Smooth Endoplasmic Reticulum (SER)No ribosomes attached

    Synthesizes lipids and carbohydrates: phospholipids and cholesterol (membranes)

    steroid hormones (reproductive system)

    glycerides (storage in liver and fat cells)

    glycogen (storage in muscles)

    Rough Endoplasmic Reticulum (RER)

    Surface covered with ribosomes: active in protein and glycoprotein synthesis

    folds polypeptides protein structures

    encloses products in transport vesicles

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    Golgi ApparatusVesicles enter forming face and exit maturing face

    Secretory vesicles:

    modify and package products

    for exocytosis

    Membrane renewalvesicles:

    add or remove membrane

    components

    Transport vesicles:

    Carry materials to and

    from Golgi apparatus

    L

    Primary lysosome:

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    LysosomesPowerful enzyme-

    containing vesicles:

    lyso= dissolve,soma= body

    Primary lysosome:

    formed by Golgi

    and inactive

    enzymes

    Secondary

    lysosome:

    lysosome fused

    with damagedorganelle

    digestive

    enzymes

    activated toxic chemicals

    isolatedExocytosis

    Ejects secretory products and wastes

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    Lysosome FunctionsClean up inside cells:

    break down large molecules attack bacteria

    recycle damaged organelles

    ejects wastes by exocytosis

    Self-destruction of damaged cells (Autolysis):

    auto= self, lysis= break

    lysosome membranes break down

    digestive enzymes released

    cell decomposes

    cellular materials recycle

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    Peroxisomes

    Are enzyme-containing vesicles:

    break down fatty acids, organic compounds

    produce hydrogen peroxide (H2O2)

    replicate by division

    Mit h d i

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    Mitochondria

    Structure

    Figure 39a

    Have smooth outer membrane and folded inner

    membrane (cristae) - form walls or rooms

    Matrix:

    fluid around cristae

    Mit h d i l F ti

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    Mitochondrial Functiontakes chemical energy from food (glucose)

    produces energy molecule ATP (Aerobicmetabolism)

    Figure 39b

    N l

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    Nucleus

    Is the cells control center

    - largest organelleNuclear envelope:

    double membranearound the nucleus

    Nuclear pores:

    communicationpassages

    Within the Nucleus

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    Within the NucleusDNA:

    all information to build and run organisms

    Nucleoplasm:

    fluid containing ions, enzymes, nucleotides,

    and some RNA

    Nuclear matrix:

    support filaments

    Nucleoliin NucleusAre related to protein production

    Are made of RNA, enzymes, and histones

    Synthesize rRNA and ribosomal subunits

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    KEY CONCEPT

    Cells: basic structural and functional

    units of life

    respond to their environment

    maintain homeostasis at the cellular level

    modify structure and function over time

    Organization of DNA

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    Organization of DNA

    Figure 311

    Nucleosomes:

    DNA coiled aroundhistones

    Chromatin:

    loosely coiled DNA

    (cells not dividing)

    Chromosomes:

    tightly coiled DNA

    (cells dividing)

    What is genet ic code?

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    DNA and Genes

    DNA: instructions for every protein in the body

    Gene:

    The instructions for making a single protein

    What is genet ic code?

    Genetic CodeThe chemical language of DNA instructions:

    sequence of bases(A, T, C, G)

    triplet code:

    3 bases = 1 amino acid

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    KEY CONCEPT

    The nucleus contains chromosomesChromosomes contain DNA

    DNA stores genetic instructions for

    proteinsProteins determine cell structure and

    function

    H d DNA i t t i b t i ?

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    How do DNA instruc t ions become proteins?

    Protein SynthesisTranscription:

    copies instructions from DNA to mRNA (in nucleus)

    Translation:

    ribosome reads code from mRNA (in cytoplasm)

    assembles amino acids into polypeptide chainProcessing:

    by RER and Golgi apparatus produces protein

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    - DNA contains genetic template" for

    proteins.

    - DNA is found in the nucleus- Protein synthesis occurs in the

    cytoplasm - ribosome.

    - "Genetic information" must be

    transferred to the cytoplasm where

    proteins are synthesized.

    problem

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    Processes of Protein Synthesis

    Transcription- genetic template for

    a protein is copied and carried out

    to the cytoplasm

    Translation- template serves as aseries of codes for the amino acid

    sequence of the protein

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    Steps of Transcription

    1. DNA unwinds

    2. One side of DNA "codes for a

    protein"3. Genetic code of DNA is a triplet

    code of 3 nucleotides or bases

    4. Each triplet is specific for thecoding of a single amino acid

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    A view of transcription

    Fig. 14.12 Brum

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    Transcription (cont.)

    5. Sequence of triplet codes on DNA will

    specify the amino acid sequence on the

    protein

    6. Major step is the synthesis of the coded"messenger" molecule - mRNA

    7. mRNA is "transcribed" from DNA by

    complementary base pairing (mRNA hasno thymine, which is replaced by uracil)

    8. mRNA passes out to cytoplasm to the

    ribosome

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    fig. 15.5 from Raven

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    Steps in Translation

    1. mRNAattaches to the ribosome

    2. tRNA'sattach to free amino acids

    in the cytoplasmic "pool" of aminoacids

    3. tRNAcarries its specific amino

    acid to the ribosome

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    fig. 15.5 from Raven

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    Translation (cont.)

    4. tRNA"delivers" its amino acid based on

    complementary pairing of a triplet code

    (anticodon) with the triplet code (codon) of

    the mRNA.

    5. Enzyme "hooks" the amino acid to the last

    one in the chain forming a peptide bond.

    6. Protein chain continues to grow as each

    tRNA brings in its amino acid and adds it

    to the chain. - This is translation!!

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    fig. 15.5 from Raven

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    U C G UU C A A A

    mRNA

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

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    U C G UU C A A A

    mRNA

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    Nucleus

    Cytoplasm

    Ribosome

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    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    Nucleus

    Cytoplasm

    U C G UU C A A A

    U C G UU C A A A

    mRNA

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    Nucleus

    Cytoplasm

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    Nucleus

    Cytoplasm

    AA1

    AGC

    tRNAs

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    AA2

    AAG

    AA1

    AGC

    tRNAs

    Nucleus

    Cytoplasm

    ATP

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    AA3

    U U U

    AA2

    AAG

    AA1

    Nucleus

    Cytoplasm

    AA1

    ATP

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    AA3

    U U U

    AA2

    AAG

    AA1

    Nucleus

    Cytoplasm

    AGC

    AA1

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    AA3

    U U U

    AA2

    AAG

    AA1

    Nucleus

    Cytoplasm

    AGC

    AA1

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    U C G UU C A A A

    A

    GC T T CA AAT

    GC A A TTG TCodingStran

    AA3

    U U U

    AA2AA1

    Nucleus

    Cytoplasm

    AGC

    AA1