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Moscow-Bavarian Joint Advanced Student School 19-29 March 2006, Moscow, Russia Correction and Preprocessing Methods Veselin Dikov Moscow-Bavarian Joint Advanced Student School 19-29. March 2006 Moscow, Russia

Correction and Preprocessing Methods

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Correction and Preprocessing Methods. Veselin Dikov Moscow-Bavarian Joint Advanced Student School 19-29. March 2006 Moscow, Russia. Outline. Beam hardening Scattered radiation Ring artefacts References. Beam hardening. Monochromatic vs. Polychromatic X-ray source - PowerPoint PPT Presentation

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Page 1: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction and Preprocessing Methods

Veselin Dikov

Moscow-Bavarian Joint Advanced Student School19-29. March 2006

Moscow, Russia

Page 2: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Outline

● Beam hardening

● Scattered radiation

● Ring artefacts

● References

Page 3: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Beam hardening

● Monochromatic vs. Polychromatic X-ray source● Absorption of low energy photons● Additive detector● Mean energy higher - beam hardening

Page 4: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Thickness measurement

rayind dsyxNN ),(exp

● Monochromatic

● Polychromatic

d

in

ray N

Ndsyx ln),(

d

in

N

Nl ln for homogenous medium

dEdsEyxESN

rayind ),,(exp)(

Page 5: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Thickness measurement

● “Non-linear” deviation of the polychromatic signal

Page 6: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Beam hardening artefacts

● Cupping● Simulated skull

Page 7: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Beam hardening artefacts

● Streaks● Hard (e.g. bone) tissues

Page 8: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction Strategies

● Preprocessing On projection data

● Postprocessing On reconstructed data

● Dual-energy imaging Considered most elegant

Page 9: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Preprocessing

● Select “appropriate” absorber

● Measured value A is corrected to A’

● Assumes “homogeneous” medium

● Fails if bone present

Page 10: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Postprocessing

● Iterative approach: first: preprocessing step second: threshold to identify hard structures third: forward-project the contribution of the hard

structures into projection data

● Good results

Page 11: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Dual-energy image

● Modeling of the attenuation coefficient

● Substitute in

● Gives

dEdsEyxESN

rayind ),,(exp)(

)(),()(),(),,( 21 EfyxaEgyxaEyx KN

ray ii

KNind

idsyxaA

dEEfAEgAESN

2,1),(

))()((exp)( 21

for , where

vdikov
f and g depend only on Eg - Photoelectronic absorptionf - Compton scatter contribution
Page 12: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

● Two energies - two integral equations

● Reconstruct and Now can be reconstructed for any E

● Two scans?

Dual-energy image

dEEfAEgAESAAI

dEEfAEgAESAAI

KN

KN

))()((exp)(),(

))()((exp)(),(

212212

211211

),(1 yxa ),(2 yxa

vdikov
single scan with:- split detectors- changing tube voltage in alternating projections
Page 13: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Outline

● Beam hardening

● Scattered radiation

● Ring artefacts

● References

Page 14: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scattered radiation

● Scattered radiation● Components of

scatter Off-focus radiation

(OFR) Scattered radiation in

the patient Veiling glare

vdikov
3G vs 4G
Page 15: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scatter measure

● SPR – Scatter-to-Primary-Ratio● Broad beam model estimation for SPR

22

222 12sR

sRLRLLSPR st

vdikov
dependence of SPR on thickness, air gap, beam width, so on
Page 16: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scatter artefacts – loss of contrast

● Loss of contrast Contrast without scatter

Contrast with scatter

SPRe

SPRC

bb t

)(

1ln

bb tC )(

Page 17: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scatter artefacts – loss of sharpness

● Loss of sharpness Transmitted radiation

- blurring kernel - 2D convolution

srpt III

srpsr hISPRI

srh

dudvvyuxhvugyxhg ),(),(),)((

Page 18: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scatter artefacts – loss of sharpness

● Loss of sharpness Veiling glare contribution

vgttd hIII )1(

vgsrppsrppd hhISPRIhISPRII )())(1(

vdikov
weighted applying of two blurring kernels - all we need to know
Page 19: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Scatter reduction methods

●Anti-scatter grids 4G vs. 3G Higher voltage

●Air gaps Magnifying effects Increased blurring

●Beam collimation Complicated systems

22

222 12sR

sRLRLLSPR st

reminder:

Page 20: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Measurement of scatter

● Opaque disc techniques Scatter in the “shadow” Arrays of discs with decreasing size

● Aperture techniques Narrow beam “clean” of scatter Arrays of apertures

● Hybrid techniques● One vs. Two scan techniques

Page 21: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction schemes - Convolution Filtering

● Detected image

● Use as an estimation for

● Spatial vs. frequency domain filtering● Analytical vs. empirical approaches for filtering

schemes

sppspd hISPRIIII

spdp hISPRII

dI pI

)( sddp hIWII

Page 22: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction schemes – Scatter sampling

●Sampling of the scatter measurement Opaque discs arrays Aperture grid

●Interpolation of the smooth surface -6 dB

vgsrppsrppd hhISPRIhISPRII )())(1(

Page 23: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction schemes – Scatter sampling

●Interpolation schemes 2D least squares fitting Filtration with sinc and

jinc 2D polynomial fitting 2D bicubic splines

●Sampling rate depends on surface frequencies

vdikov
least squares - 15 % error on the pointsFiltration - aliasing artefactspolinomial - fine up-to 5x5 sample (6-deg poly)spline - fine for any sample size
Page 24: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Results

Page 25: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Outline

● Beam hardening

● Scattered radiation

● Ring artefacts

● References

Page 26: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Ring artefacts

Page 27: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Ring Artefacts

● Reason

● 4G vs. 3G

● Postprocessing correction only

Page 28: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Correction scheme

1. ROI

2. I P

3. Artefact pattern

4. Artefact subtraction

5. P I

Page 29: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

ROI

● Select ROI with morphological operations

Page 30: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Find artefact pattern

● Scan for irregularities Use variance of signal or Use median of signal etc.

● Extract ring pattern

Page 31: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

Results

Page 32: Correction and Preprocessing Methods

Moscow-Bavarian Joint Advanced Student School19-29 March 2006, Moscow, Russia

References

● T.Buzug, Einfürung in die Computertomographie, Springer-Verlag (2004)● A.Kak and M.Slaney, Principles of Computerized Tomographic Imaging,

IEEE Press (1988)● K.P.Maher and J.F. Malone, Computerized scatter correction in diagnostic

radiology, Contemporary Physics 38, 131-148 (1997).● J.Sijbers and A.Postnov, Reduction of ring artefacts in high resolution

micro-CT reconstructions, Physics in Medicine and Biology Vol. 49 (07/2004)

● M.Zellerhoff et al, Low contrast 3D-reconstruction from C-arm data, Medical Imaging SPIE, 646-655 (04/2004)

Thank you for your attention!