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24Feb2015 End of Day Shutdown CyTOF2 End of the Day Shutdown (Software Version 6.0.626) A. Washing sample lines (After your last sample has been run) 1. Follow the final wash procedures outlined in the Sample Acquisition SOP. 2. Once background levels are acceptable, we’re ready to shutdown. B. Turning off the Plasma 1. Click the “About” Tab on the CyTOF home window a. Select “Login” into administrator user account 1. Enables access to the “Control Panel” 2. Administrator / donuts 2. Click the “Control Panel” Tab in the CyTOF Main Menu to open the control panel 3. Click the “Plasma” Tab to open the Plasma control 4. Click “Stop Plasma” a. Shutdown takes about 5-10 minutes

CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

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Page 1: CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

24Feb2015EndofDayShutdown

CyTOF2EndoftheDayShutdown(SoftwareVersion6.0.626)

A. Washingsamplelines(Afteryourlastsamplehasbeenrun)1. FollowthefinalwashproceduresoutlinedintheSampleAcquisitionSOP.2. Oncebackgroundlevelsareacceptable,we’rereadytoshutdown.

B. TurningoffthePlasma

1. Clickthe“About”TabontheCyTOFhomewindow

a. Select“Login”intoadministratoruseraccount1. Enablesaccesstothe“ControlPanel”2. Administrator/donuts

2. Clickthe“ControlPanel”TabintheCyTOFMainMenutoopenthecontrolpanel3. Clickthe“Plasma”TabtoopenthePlasmacontrol4. Click“StopPlasma”

a. Shutdowntakesabout5-10minutes

Page 2: CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

24Feb2015EndofDayShutdown

b. TheSyringePump,ChillerandHeaterwillshutoffaspartoftheshutdownprocedure

5. WaitforthepromptindicatingasuccessfulshutdownbeforeproceedingtoPartC

C. TurnoftheArgonGasflowontheTank1. Ifgasisbeingdrawnfromacylinder,pleaseshutoffgasflowattheCylinder2. IfgasisbeingdrawnfromtheArgondewar,noactionisrequired.

Page 3: CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

24Feb2015EndofDayShutdown

D. RemovetheNebulizerfromtheNebulizerport

E. Disassemblethenebulizer1. RemovetheSampleCapillaryfromtheNebulizer2. PlacetheFlangelessfixtureinitshomeunderneaththeheater

3. DisconnectthegaslinefromtheNebulizera. UnscrewtheSwagelokfromtheNebulizersidebeingcarefultocatchtheferruleandtheO-ring

1. RecommendthatyouholdtheNebulizerupsidedowntocatchallthreepiecesoftheattachmentassembly

a. WhiteNylonFerrule

Page 4: CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

24Feb2015EndofDayShutdown

b. BlackO-ringc. WhiteSwageloknut

b. RemovetheNebulizerc. ReassembletheSwagelokfixturewiththeferruleandO-ringembeddedontothegaslineandstorethegaslineonthehousingnexttotheHeatercage

d. FilltheNebulizerwiththemilliQwaterusingasyringeattachedtotheNebulizersidearmandtheNebulizersampleline

e. PlacethenebulizerinitsStorageCasefilledwithMilliQwaterandsoakovernightoruntilnextuse

Page 5: CyTOF2 End of the Day Shutdown (Software Version …. Reassemble the Swagelok fixture with the ferrule and O-ring embedded on to the gas line and store the gas line on the housing

24Feb2015EndofDayShutdown

F. ClosetheCyTOFsoftwarepackageG. Doublecheckthatyouperformeda“FACSDataCheck-in”H. Logoutofyourwindowsaccounttostopthatday’saccounting

LeaveallothercomponentsontheCyTOFrunningindefinitely