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© CSIRO 2018 Marine and Freshwater Research, 2018, 69, 1208–1221
https://doi.org/10.1071/MF17241
Page 1 of 30
Supplementary material
Deficiencies in our understanding of the hydro-ecology of several native Australian fish:
a rapid evidence synthesis
Kimberly A. MillerA,D, Roser Casas-MuletB,A, Siobhan C. de LittleA, Michael J. StewardsonA,
Wayne M. KosterC and J. Angus WebbA,E
ADepartment of Infrastructure Engineering, The University of Melbourne, Parkville, Vic. 3010, Australia.
BWater Research Institute, Cardiff University, The Sir Martin Evans Building, Museum Avenue, Cardiff,
CF10 3AX, UK.
CArthur Rylah Institute for Environmental Research, Department of Environment, Land, Water and Planning,
Heidelberg, Vic. 3084, Australia.
DPresent address: Healesville Sanctuary, Badger Creek Road, Healesville, Vic. 3777, Australia.
ECorresponding author. Email address: [email protected]
Marine and Freshwater Research © CSIRO 2018
https://doi.org/10.1071/MF17241
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Table S1. All papers located by standardised searches and following citation trails for the two rapid evidence assessments
All papers are marked as Relevant or Irrelevant based on a reading of the title and abstract. Those deemed relevant on the first screen are marked as Relevant
or Irrelevant based on a full assessment of the reference.The table contains incomplete citation details for a number of irrelevant papers. The information
provided is as returned from the different evidence databases. Given that these references were not relevant to our review, we have not sought out the full
citation details.
Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Search hit Anon (1998) Soy protein-based formulas: recommendations for use in infant feeding. Available at http://go.galegroup.com/ps/i.do?id=GALE%7CA20303361&v=2.1&u=unimelb&it=r&p=EAIM&sw=w
Irrelevant
Search hit Anon (2007) Mission possible: taking control of pediatric GERD. Available at
http://go.galegroup.com/ps/i.do?id=GALE%7CA168360791&v=2.1&u=unimelb&it=r&p=EAIM&sw=w
Irrelevant
Search hit Osman, A. G. M., Abd El Reheem, A.-E. B. M., AbuelFadl, K. Y., and GadEl-Rab, A. G. (2010). Enzymatic and histopathologic biomarkers as indicators of aquatic
pollution in fishes. Nature and Science 2, 1302. doi:10.4236/ns.2010.211158
Irrelevant
Search hit Tighe, M. P., Afzal, N. A., Bevan, A., and Beattie, R. M. (2009). Current pharmacological management of gastro-esophageal reflux in children: an evidence-based systematic review. Paediatric Drugs 11, 185. doi:10.2165/00148581-200911030-00004
Irrelevant
Search hit Agostoni, C., Giovannini, M., and Enrica, R. (1995) Dietary fibre in weaning foods of young children. Available at
http://go.galegroup.com/ps/i.do?id=GALE%7CA17809710&v=2.1&u=unimelb&it=r&p=EAIM&sw=w
Irrelevant
Search hit Allen, M. J., Groce, A. K., and Rosenblatt, R. H. (2001). Addition of Blacklip Dragonet, Synchiropus atrilabiatus (Garman, 1899) (Pisces: Callionymidae) to the
California Ichthyofauna. Bulletin of the Southern California Academy of Sciences 100, 149.
Irrelevant
Search hit Alves, M. J., Coelho, H., Collares-Pereira, M. J., and Coelho, M. M. (2001). Mitochondrial DNA variation in the highly endangered cyprinid fish Anaecypris hispanica: importance for conservation. Heredity 87, 463–473. doi:10.1046/j.1365-2540.2001.00929.x
Irrelevant
Search hit Forsgren, E., Amundsen, T., Bjelvenmark, J., and Borg, Å. A. (2004). Unusually dynamic sex roles in a fish. Nature 429, 551. doi:10.1038/nature02562 Irrelevant
Search hit Anderson, J. R., Mackay, N. J., and Lake, J. S. (1971). Notes on reproductive behavior and ontogeny in 2 species of Hypseleotris (=Carassiops) (Gobiidae-Teleostei). Australian Journal of Marine and Freshwater Research 22, 139–140. doi:10.1071/MF9710139
Relevant Irrelevant
Search hit Anon (2006). Student award winners at the 2006 annual meeting. Bulletin of the Southern California Academy of Sciences 105, S1. Irrelevant
Search hit Anon (2011). Science; new science findings from Griffith University published. Ecology, Environmental Conservation 365. Irrelevant Search hit Anon (2012). Animal ecology; findings from Charles Darwin University broaden understanding of animal ecology. Energy & Ecology 141. Irrelevant
Search hit Anon (2012). Animal ecology; findings from University of Queensland advance knowledge in animal ecology. Ecology, Environmental Conservation 80. Irrelevant
Search hit Anon (2012). Conservation genetics; study results from South Australian Museum provide new insights into conservation genetics. Ecology, Environmental Conservation 614.
Irrelevant
Search hit Anon (2012). Environmental metrics; findings from Griffith University in environmental metrics reported. Ecology, Environmental Conservation 163. Irrelevant
Search hit Anon (2012). Freshwater research; La Trobe University details research in freshwater research. Ecology, Environmental Conservation 174. Irrelevant Search hit Anon (2012). Science; research from Arizona State University in the area of science described. Science Letter 5425. Irrelevant
Search hit Anon (2012). Science; scientists at Catholic University target science. Science Letter 2421. Irrelevant
Search hit Anon (2013). Freshwater research; study findings from Griffith University provide new insights into freshwater research. Ecology, Environmental Conservation 601. Irrelevant
Search hit Anonymous (2003). 2003 buyer’s guide. Journal of Housing and Community Development 60, BG1–BG28. Irrelevant
Search hit Anonymous (2006). Distributor news: news digests. Nation’s Restaurant News 40, 16. Irrelevant
Search hit Anonymous (2008). Fisheries research; new fisheries research study findings recently were reported by L. Vilizzi and co-researchers. Ecology, Environmental & Conservation Business 107.
Irrelevant
Search hit Anonymous (2008). Marine biology; findings from Macquarie University in marine biology reported. Ecology, Environmental Conservation 38. Irrelevant
Search hit Anonymous (2008) Marine biology; research on marine biology reported by I.G. Stuart et al. Ecology, Environmental & Conservation Business: 234. Irrelevant Search hit Anonymous (2008). Marine biology; scientists at James Cook University describe research in marine biology. Ecology, Environmental Conservation 76. Irrelevant
Marine and Freshwater Research © CSIRO 2018
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Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Search hit Anonymous (2009). Aquatic conservation; recent findings in aquatic conservation described by J.T. Knight and colleagues. Ecology, Environmental Conservation 272.
Irrelevant
Search hit Anonymous (2009). Ecology; data on ecology detailed by researchers at University of Auckland. Ecology, Environmental Conservation 291. Irrelevant
Search hit Anonymous (2009). Marine biology; research on marine biology detailed by J.T. Knight and co-authors. Ecology, Environmental Conservation 112. Irrelevant Search hit Anonymous (2009). Veterinary research; data on veterinary research discussed by F.J. Stephens and colleagues. Veterinary Week 75. Irrelevant
Search hit Anonymous (2010). Biological invasions; new biological invasions research has been reported by scientists at University of Sydney. Science Letter 1771. Irrelevant
Search hit Anonymous (2010). Conservation genetics; new findings reported from M.P. Hammer and co-authors describe advances in conservation genetics. Ecology, Environmental Conservation 187.
Irrelevant
Search hit Anonymous (2010). Ecology; Reports from Deakin University highlight recent research in ecology. Energy & Ecology Business 1145. Irrelevant
Search hit Anonymous (2010). Evolutionary Biology; New evolutionary biology data have been reported by researchers at Monash University. Science Letter 1033. Irrelevant
Search hit Anonymous (2010). Freshwater Research; Research on freshwater research described by scientists at Deakin University. Ecology, Environmental Conservation 281. Irrelevant
Search hit Anonymous (2010). Freshwater research; research on freshwater research reported by scientists at La Trobe University. Ecology, Environmental Conservation 233. Irrelevant
Search hit Anonymous (2010). Marine biology; research by J. Lyon and colleagues in marine biology provides new insights. Ecology, Environmental Conservation 375. Irrelevant Search hit Anonymous (2011). Biological Conservation; new biological conservation findings from R.J. Rolls and co-researchers published. Ecology, Environmental
Conservation 274.
Irrelevant
Search hit Anonymous (2011). Ecology; studies from University of Sydney in the area of ecology described. Ecology, Environmental Conservation 655. Irrelevant Search hit Anonymous (2011). Environmental science and technology; study results from M.A. Trenfield and colleagues update understanding of environmental science and
technology. Ecology, Environmental Conservation 1023.
Irrelevant
Search hit Anonymous (2011). Fish biology; research from Griffith University provides new data on fish biology. Science Letter 2204. Irrelevant Search hit Anonymous (2011). Marine biology; data on marine biology described by researchers at Murdoch University. Ecology, Environmental Conservation 160. Irrelevant
Search hit Arthington, A. H. (2009). Australian lungfish, Neoceratodus forsteri, threatened by a new dam. Environmental Biology of Fishes 84, 211–221. doi:10.1007/s10641-
008-9414-y
Irrelevant
Search hit Arthington, A. H., and Marshall, C. J. (1996). Threatened fishes of the world: Nannoperca oxleyana Whitley, 1940 (Nannopercidae). Environmental Biology of
Fishes 46, 150. doi:10.1007/BF00005216
Irrelevant
Search hit Arthington, A. H., Milton, D. A., and McKay, R. J. (1983). Effects of urban development and habitat alterations on the distribution and abundance of native and exotic freshwater fish in the Brisbane region, Queensland. Australian Journal of Ecology 8, 87–101. doi:10.1111/j.1442-9993.1983.tb01597.x
Relevant Relevant
Search hit Attard, C. R. M., Brauer, C. J., Van Zoelen, J. D., Sasaki, M., Hammer, M. P., Morrison, L., Harris, J. O., Moller, L. M., and Beheregaray, L. B. (2016a). Multi-
generational evaluation of genetic diversity and parentage in captive southern pygmy perch (Nannoperca australis). Conservation Genetics 17(6), 1469–1473. doi:10.1007/s10592-016-0873-y
Irrelevant
Search hit Attard, C. R. M., Moller, L. M., Sasaki, M., Hammer, M. P., Bice, C. M., Brauer, C. J., Carvalho, D. C., Harris, J. O., and Beheregaray, L. B. (2016b). A novel
holistic framework for genetic-based captive-breeding and reintroduction programs. Conservation Biology 30(5), 1060–1069. doi:10.1111/cobi.12699
Irrelevant
Search hit Auty, E. H. (1978). Reproductive-behavior and early development of empire fish Hypseleotris compressus (Eleotridae). Australian Journal of Marine and
Freshwater Research 29, 585–597. doi:10.1071/MF9780585
Relevant Irrelevant
Search hit Jones, A. G., Ostlund-Nilsson, S., and Avise, J. C. (1998). A microsatellite assessment of sneaked fertilizations and egg thievery in the fifteenspine stickleback. Evolution 52, 848. doi:10.1111/j.1558-5646.1998.tb03709.x
Irrelevant
Search hit Brian, J. V., Harris, C. A., Scholze, M., Backhaus, Booy, P., T., Lamoree, M., Pojana, G., Jonkers, N., Runnalls, T., Bonfa, A., Marcomini, A., and Sumpter, J. P.
(2005). Accurate prediction of the response of freshwater fish to a mixture of estrogenic chemicals. Environmental Health Perspectives 113, 721. doi:10.1289/ehp.7598
Irrelevant
Search hit Baker, A. M., Hurwood, D. A., Krogh, M., and Hughes, J. M. (2004). Mitochondrial DNA signatures of restricted gene flow within divergent lineages of an atyid
shrimp (Paratya australiensis). Heredity 93, 196–207. doi:10.1038/sj.hdy.6800493
Irrelevant
Search hit Kavanagh, R. J., Balch, G. C., Kiparissis, Y., Niimi, A. J., Sherry, J., Tinson, C., and Metcalfe, C. D. (2004). Endocrine disruption and altered gonadal development
in white perch (Morone americana) from the lower Great Lakes region. Environmental Health Perspectives 112, 898. doi:10.1289/ehp.6514
Irrelevant
Search hit Kiparissis, Y., Balch, G. C., Metcalfe, T. L., and Metcalfe, C. D. (2003). Effects of the isoflavones genistein and equol on the gonadal development of Japanese medaka (Oryzias latipes). Environmental Health Perspectives 111, 1158. doi:10.1289/ehp.5928
Irrelevant
Search hit Balcombe, S. R., Sheldon, F., Capon, S. J., Bond, N. R., Hadwen, W. L., Marsh, N., and Bernays, S. J. (2011). Climate-change threats to native fish in degraded rivers and floodplains of the Murray–Darling Basin, Australia. Marine and Freshwater Research 62, 1099–1114. doi:10.1071/MF11059
Irrelevant
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Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Search hit Balcombe, S. R., and Closs, G. P. (2000). Variation in carp gudgeon (Hypseleotris spp.) catch rate in dense macrophytes. Journal of Freshwater Ecology 15, 389–395. doi:10.1080/02705060.2000.9663757
Relevant Irrelevant
Search hit Balcombe, S. R., and Closs, G. P. (2004). Spatial relationships and temporal variability in a littoral macrophyte fish assemblage. Marine and Freshwater Research
55, 609–617. doi:10.1071/MF03170
Relevant Irrelevant
Search hit Balcombe, S. R., and Humphries, P. (2006). Diet of the western carp gudgeon (Hypseleotris klunzingeri Ogilby) in an Australian floodplain lake: the role of water
level stability. Journal of Fish Biology 68, 1484–1493. doi:10.1111/j.0022-1112.2006.001036.x
Relevant Irrelevant
Search hit Balcombe, S. R., and Closs, G. P. (2016). Patchiness in food resources drives fish abundances in emergent macrophytes under field and experimental conditions. Hydrobiologia 781(1), 127–142. doi:10.1007/s10750-016-2828-1
Relevant Irrelevant
Search hit Balirwa, J. S., Chapman, C. A., Chapman, L. J., Cowx, I. G., Geheb, K., Kaufman, L., Lowe-McConnell, R. H., Seehausen, O., Wanink, J. H., Welcomme, R. L.,
and Witte, F. (2003). Biodiversity and fishery sustainability in the Lake Victoria basin: an unexpected marriage? Bioscience 53, 703. doi:10.1641/0006-
3568(2003)053[0703:BAFSIT]2.0.CO;2
Irrelevant
Search hit Cacciari, E., Milani, S., Balsamo, A., Dammacco, F., De Luca, F., Chiarelli, F., Pasquino, A. M., Tonini, G., and Vanelli, M. (2002). Italian cross-sectional growth
charts for height, weight and BMI (6-20y). European Journal of Clinical Nutrition 56, 171. doi:10.1038/sj.ejcn.1601314
Irrelevant
Search hit Bandoli, J. H., Morera, D. C., and Walls, M. L. (2004). Incipient second dorsal fin egg mimics in the spottail darter, Etheostoma squamiceps? Proceedings of the
Indiana Academy of Sciences 113, 115.
Irrelevant
Search hit Barretti, M. (2004). What do we know about the professional socialization of our students? Journal of Social Work Education 40, 255. doi:10.1080/10437797.2004.10778493
Irrelevant
Search hit Bartell, P. A., and Gwinner, E. (2005). A separate circadian oscillator controls nocturnal migratory restlessness in the songbird Sylvia borin. Journal of Biological
Rhythms 20, 538. doi:10.1177/0748730405281826
Irrelevant
Search hit Baumgartner, L. J., Stuart, I. G., and Zampatti, B. P. (2008). Determining diel variation in fish assemblages downstream of three weirs in a regulated lowland river.
Journal of Fish Biology 72, 218–232. doi:10.1111/j.1095-8649.2007.01696.x
Relevant Irrelevant
Search hit Baumgartner, L. J., and Harris, J. H. (2007). Passage of non-salmonid fish through a Deelder lock on a lowland river. River Research and Applications 23, 1058–1069. doi:10.1002/rra.1032
Relevant Irrelevant
Search hit Beatty, S. J., and Morgan, D. L. (2010). Teleosts, agnathans and macroinvertebrates as bioindicators of ecological health in a south-western Australian river. Journal
of the Royal Society of Western Australia 93, 65–79.
Relevant Irrelevant
Search hit Beatty, S. J., Morgan, D. L., Rashnavadi, M., and Lymbery, A. J. (2011). Salinity tolerances of endemic freshwater fishes of south-western Australia: implications
for conservation in a biodiversity hotspot. Marine and Freshwater Research 62, 91–100. doi:10.1071/MF10100
Relevant Irrelevant
Search hit Beatty, S. J., Morgan, D. L., and Lymbery, A. J. (2014). Implications of climate change for potamodromous fishes. Global Change Biology 20(6), 1794–1807. doi:10.1111/gcb.12444
Relevant Irrelevant
Search hit Beesley, L., King, A. J., Amtstaetter, F., Koehn, J. D., Gawne, B., Price, A., Nielsen, D. L., Vilizzi, L., and Meredith, S. N. (2012). Does flooding affect
spatiotemporal variation of fish assemblages in temperate floodplain wetlands? Freshwater Biology 57, 2230–2246. doi:10.1111/j.1365-2427.2012.02865.x
Relevant Relevant
Search hit Bernal Casasola, D., Alonso Villalobos, C., and Gracia Prieto, F. J. (2011) De la acuicultura en Baetica A propósito de la posible piscina-vivero del yacimiento
haliéutico del Cabo Trafalgar (Cádiz). Zephyrus 67: 145-160. [Fish farming in Baetica. The piscina of the halieutic site at Trafalgar Cape (Cádiz).]
Irrelevant
Search hit Bertozzi, T., Adams, M., and Walker, K. F. (2000). Species boundaries in carp gudgeons (Eleotrididae : Hypseleotris) from the River Murray, South Australia: evidence for multiple species and extensive hybridization. Marine and Freshwater Research 51, 805–815. doi:10.1071/MF00039
Relevant Irrelevant
Search hit Bice, C. M., Gehrig, S. L., Zampatti, B. P., Nicol, J. M., Wilson, P., Leigh, S. L., and Marsland, K. (2014). Flow-induced alterations to fish assemblages, habitat and
fish-habitat associations in a regulated lowland river. Hydrobiologia 722(1), 205–222. doi:10.1007/s10750-013-1701-8
Relevant Relevant
Search hit Bogo, M., Globerman, J., Hughes, J., Power, R., and Regehr, C. (2002). Evaluating a measure of student field performance in direct service: testing reliability and
validity of explicit criteria. Journal of Social Work Education 38, 385. doi:10.1080/10437797.2002.10779106
Irrelevant
Search hit GlenMaye, L. F., and Bolin B (2007). Students with psychiatric disabilities: an exploratory study of program practices. Journal of Social Work Education 43, 117. doi:10.5175/JSWE.2007.200404112
Irrelevant
Search hit Bond, N. R., and Lake, P. S. (2003). Characterizing fish-habitat associations in streams as the first step in ecological restoration. Austral Ecology 28, 611–621.
doi:10.1046/j.1442-9993.2003.t01-1-01317.x
Relevant Irrelevant
Search hit Bond, N. R., and Lake, P. S. (2005). Ecological restoration and large-scale ecological disturbance: The effects of drought on the response by fish to a habitat
restoration experiment. Restoration Ecology 13, 39–48. doi:10.1111/j.1526-100X.2005.00006.x
Relevant Irrelevant
Search hit Bookman, A., and Kimbrel, D. (2011) Families and elder care in the twenty-first century. Available at
http://go.galegroup.com/ps/i.do?id=GALE%7CA271051053&v=2.1&u=unimelb&it=r&p=EAIM&sw=w
Irrelevant
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Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Search hit Boone, E. L., Stewart-Koster, B., and Kennard, M. J. (2012). A hierarchical zero-inflated Poisson regression model for stream fish distribution and abundance. Environmetrics 23, 207–218. doi:10.1002/env.1145
Relevant Irrelevant
Search hit Booth, M. T., and Shipley, A. J. (2012). Spatial dynamics and growth of two native species of catostomids: are movements restricted? The Southwestern Naturalist
57, 248. doi:10.1894/0038-4909-57.3.248
Irrelevant
Search hit Mandich, A., Massari, A., Bottero, S., Pizzicori, P., Goos, H., and Marino, G. (2004). Plasma sex steroid and vitellogenin profiles during gonad development in wild
Mediterranean amberjack (Seriola dumerilii). Marine Biology 144, 127. doi:10.1007/s00227-003-1185-6
Irrelevant
Search hit Boxall, G. D., Sandberg, J. J., and Kroon, F. J. (2002). Population structure, movement and habitat preferences of the purple-spotted gudgeon, Mogurnda adspersa. Marine and Freshwater Research 53, 909–917. doi:10.1071/MF01039
Relevant Irrelevant
Search hit Bracamonte, S. E., Smith, S., Hammer, M., Pavey, S., Sunnucks, P., and Beheregaray, L. B. (2015). Characterization of MHC class 11B for four endangered
Australian freshwater fishes obtained from ecologically divergent populations. Fish & Shellfish Immunology 46(2), 468–476 doi:10.1016/j.fsi.2015.06.009.
Irrelevant
Search hit Brauer, C. J., Hammer, M. P., and Beheregaray, L. B. (2016). Riverscape genomics of a threatened fish across a hydroclimatically heterogeneous river basin.
Molecular Ecology 25(20), 5093–5113. doi:10.1111/mec.13830
Relevant Irrelevant
Search hit Brauer, C. J., Unmack, P. J., Hammer, M. P., Adams, M., and Beheregaray, L. B. (2013). Catchment-scale conservation units identified for the threatened Yarra Pygmy Perch (Nannoperca obscura) in highly modified river systems. PLoS One 8(12), e82953 doi:10.1371/journal.pone.0082953.
Relevant Irrelevant
Search hit Brodersen, M., Richman, J., and Swick, D. (2009). Risks and mitigating factors in decisions to accept students with criminal records. Journal of Social Work
Education 45, 349. doi:10.5175/JSWE.2009.200800081
Irrelevant
Search hit Bruton, M. N. (1996). Threatened fishes of the world: Hypseleotris dayi Smith, 1950 (Eleotridae). Environmental Biology of Fishes 46, 184.
doi:10.1007/BF00005220
Irrelevant
Search hit Bywater, J. F., Banaczkowski, R., and Bailey, M. (1991). Sensitivity to uranium of 6 species of tropical fresh-water fishes and 4 species of cladocerans from northern Australia. Environmental Toxicology and Chemistry 10, 1449–1458. doi:10.1002/etc.5620101110
Relevant Irrelevant
Search hit Callinan, R. B., Sammut, J., and Fraser, G. C. (2005). Dermatitis, branchitis and mortality in empire gudgeon Hypseleotris compressa exposed naturally to runoff
from acid sulfate soils. Diseases of Aquatic Organisms 63, 247–253. doi:10.3354/dao063247
Relevant Irrelevant
Search hit Carini, G., and Hughes, J. M. (2004). Population structure of Macrobrachium australiense (Decapoda: Palaemonidae) in Western Queensland, Australia: the role of
contemporary and historical processes. Heredity 93, 350–363. doi:10.1038/sj.hdy.6800510
Irrelevant
Search hit Piorski, N. M., Sanches, A., Carvalho-Costa, L. F., Hatanaka, T., Carrillo-Avila, M., Freitas, P. D., and Galetti, P. M. Jr (2008). Contribution of conservation genetics in assessing neotropical freshwater fish biodiversity/Contribuicao da genetica da conservacao para o conhecimento da biodiversidade dos peixes de agua
doce neotropicais. Brazilian Journal of Biology 68, 1039. doi:10.1590/S1519-69842008000500011
Irrelevant
Search hit Cartwright, I., and Gilfedder, B. (2015). Mapping and quantifying groundwater inflows to Deep Creek (Maribyrnong catchment, SE Australia) using 222Rn, implications for protecting groundwater-dependant ecosystems. Applied Geochemistry 52, 118–129. doi:10.1016/j.apgeochem.2014.11.020
Irrelevant
Search hit Carvalho, D. C., Rodriguez-Zarate, C. J., Hammer, M. P., and Beheregaray, L. B. (2011). Development of 21 microsatellite markers for the threatened Yarra pygmy
perch (Nannoperca obscura) through 454 shot-gun pyrosequencing. Conservation Genetics Resources 3, 601–604. doi:10.1007/s12686-011-9413-8
Irrelevant
Search hit Carvalho, D. C., Sasaki, M., Hammer, M. P., and Beheregaray, L. B. (2012). Development of 18 microsatellite markers for the southern purple-spotted gudgeon
(Mogurnda adspersa) from the lower Murray–Darling Basin through 454 pyrosequencing. Conservation Genetics Resources 4, 339–341. doi:10.1007/s12686-011-
9542-0
Irrelevant
Search hit Carvalho, D. C., Hammer, M. P., and Beheregaray, L. B. (2012). Isolation and PCR-multiplex genotyping of 18 novel microsatellite markers for the threatened
southern pygmy perch (Nannoperca australis). Conservation Genetics Resources 4, 15–17. doi:10.1007/s12686-011-9462-z
Irrelevant
Search hit Cascio, T., and Gasker, J. (2001). Everyone has a shining side: computer-mediated mentoring in social work education. Journal of Social Work Education 37, 283. doi:10.1080/10437797.2001.10779054
Irrelevant
Search hit Cashner, R. C., Hawkes, G. P., Gartside, D. F., and Marsh-Matthews, E. (1999). Fishes of the Nymboida, Mann and Orara Rivers of the Clarence River drainage,
New South Wales, Australia. Proceedings of the Linnean Society of New South Wales 1999, 89–100.
Relevant Irrelevant
Search hit Chakona, A., and Swartz, E. R. (2012). Contrasting habitat associations of imperilled endemic stream fishes from a global biodiversity hot spot. BMC Ecology 12,
19. doi:10.1186/1472-6785-12-19
Irrelevant
Search hit Chakona, G., Swartz, E. R., and Chakona, A. (2015). Historical abiotic events or human-aided dispersal: inferring the evolutionary history of a newly discovered galaxiid fish. Ecology and Evolution 5(7), 1369–1380. doi:10.1002/ece3.1409
Irrelevant
Search hit Chandra, G., Bhattacharjee, I., Chatterjee, S. N., and Ghosh, A. (2008). Mosquito control by larvivorous fish. The Indian Journal of Medical Research 127, 13–27. Irrelevant Search hit Cheng, K. L., Hogan, A. C., Parry, D. L., Markich, S. J., Harford, A. J., and van Dam, R. A. (2010). Uranium toxicity and speciation during chronic exposure to the
tropical freshwater fish, Mogurnda mogurnda. Chemosphere 79, 547–554. doi:10.1016/j.chemosphere.2010.02.017
Relevant Irrelevant
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Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Search hit Chikhi, L., Sousa, V. C., Luisi, P., Goossens, B., and Beaumont, M. A. (2010). The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes. Genetics 186, 983–995. doi:10.1534/genetics.110.118661
Irrelevant
Search hit Choe, K. P., and Evans, D. H. (2005) The multifunctional fish gill: dominant site of gas exchange, osmoregulation, acid-base regulation, and excretion of
nitrogenous waste. Available at http://go.galegroup.com/ps/i.do?id=GALE%7CA128602937&v=2.1&u=unimelb&it=r&p=EAIM&sw=w
Irrelevant
Search hit Choongo, K., Hang’ombe, B., Samui, K. L., Syachaba, M., Phiri, H., Maguswi, C., Muyangaali, K., Bwalya, G., and Mataa, L. (2009). Environmental and climatic
factors associated with Epizootic Ulcerative Syndrome (EUS) in fish from the Zambezi Floodplains, Zambia. Bulletin of Environmental Contamination and
Toxicology 83, 474–478. doi:10.1007/s00128-009-9799-0
Irrelevant
Search hit Ryan, M., McCormack, J., and Cleak, H. (2006). Student performance in field education placements: the findings of a 6-year Australian study of admissions data.
Journal of Social Work Education 42, 67. doi:10.5175/JSWE.2006.200303106
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Search hit Rolls, R. J. (2011). The role of life-history and location of barriers to migration in the spatial distribution and conservation of fish assemblages in a coastal river system. Biological Conservation 144, 339–349. doi:10.1016/j.biocon.2010.09.011
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Search hit Rolls, R. J., Boulton, A. J., Growns, I. O., and Maxwell, S. E. (2011). Response by fish assemblages to an environmental flow release in a temperate coastal
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Search hit Rolls, R. J., and Wilson, G. G. (2010). Spatial and Temporal Patterns in Fish Assemblages Following an Artificially Extended Floodplain Inundation Event, Northern Murray–Darling Basin, Australia. Environmental Management 45, 822–833. doi:10.1007/s00267-010-9432-3
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Search hit Rommelmann, J. (2004). Beobachtungen zur vergesellschaftung junger elritzen (Phoxinus phoxinus) mit dreistachligen stichlingen (Gasterosteus aculeatus) in der
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Search hit Saddlier, S., Koehn, J. D., and Hammer, M. P. (2013). Let’s not forget the small fishes – conservation of two threatened species of pygmy perch in south-eastern
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Search hit Sasaki, M., Hammer, M. P., Unmack, P. J., Adams, M., and Beheregaray, L. B. (2016). Population genetics of a widely distributed small freshwater fish with varying conservation concerns: the southern purple-spotted gudgeon, Mogurnda adspersa. Conservation Genetics 17(4), 875–889. doi:10.1007/s10592-016-0829-2
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Search hit Schmidt, D. J., Bond, N. R., Adams, M., and Hughes, J. M. (2011). Cytonuclear evidence for hybridogenetic reproduction in natural populations of the Australian
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Search hit Schmidt, D. J., Huey, J. A., Bond, N. R., and Hughes, J. M. (2013). Population structure of sexually reproducing carp gudgeons: does a metapopulation offer refuge
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Search hit Schwab, I. R. (2004). Everyone wants a window seat. The British Journal of Ophthalmology 88, 455. doi:10.1136/bjo.2003.041327 Irrelevant Search hit Scott, N., and Zeiger, S. (2000). Should convicted felons be denied admission to a social work education program? no! Journal of Social Work Education 36, 409.
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Search hit Stoffels, R. J., and Humphries, P. (2003). Ontogenetic variation in the diurnal food and habitat associations of an endemic and an exotic fish in floodplain ponds:
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Search hit Vilizzi, L. (2012). Abundance trends in floodplain fish larvae: the role of annual flow characteristics in the absence of overbank flooding. Fundamental and Applied Limnology; Official Journal of the International Association of Theoretical and Applied Limnology 181, 215–227. doi:10.1127/1863-9135/2012/0394
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Citation trail Arthington, A. H., and Lloyd, L. N. (1989) Introduced poeciliids in Australia and New Zealand. In ‘Ecology and Evolution of Livebearing Fishes (Poeciliidae)’.
(Eds G. K. Meffe and F. F. Snelson.) pp. 333–348. (Prentice Hall: Englewood Cliffs, NJ, USA.)
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Citation trail Backhouse, G. N., and Gooley, G. J. (1979). The fish fauna of Bridgewater lakes, Portland, Victoria. Victorian Naturalist 96, 232–238. Relevant Irrelevant
Citation trail Bayly, I. A. E., Ebsworth, E. P., and Wan, H. F. (1975). Studies on the lakes of Fraser Island, Queensland. Australian Journal of Marine and Freshwater Research
26(1), 1–13. doi:10.1071/MF9750001
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Citation trail Beesley, L., Price, A., King, A., Gawne, B., Nielsen, D., Koehn, J., Meredith, S., Vilizzi, L., and Hladyz, S. (2011) Watering floodplain wetlands in the Murray–
Darling Basin for native fish. National Water Commission, Canberra
Relevant Relevant
Citation trail Blewett, C. F. (1929). Habits of some Australian freshwater fishes. South Australian Naturalist 10, 21–29. Relevant Relevant Citation trail Cadwallader, P. L., and Backhouse, G. N. (1983). Family Eleoridae: Gudgeons. In ‘A Guide to the Freshwater Fish of Victoria’. (Government Printer: Melbourne,
Vic., Australia)
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Citation trail Cadwallader, P. L., and Backhouse, G. N. (1983). Family Kuhliidae: Pigmy Perches. In ‘A Guide to the Freshwater Fish of Victoria’. (Government Printer: Melbourne, Vic., Australia)
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Citation trail Costelloe, J. F., Reid, J. R. W., Pritchard, J. C., Puckridge, J. T., Bailey, V. E., and Hudson, P. J. (2010). Are alien fish disadvantaged by extremely variable flow
regimes in arid-zone rivers? Marine and Freshwater Research 61, 857–863. doi:10.1071/MF09090
Relevant Relevant
Citation trail Gale, A. (1914). Notes on the breeding habits of the purple striped gudgeon, Kreffitus adspersa. Australian Zoologist 1(1), 25–26. Relevant Relevant
Citation trail Geddes, P. (1988) Survival and growth of larval and juvenile native fish: the importance of the floodplain. In ‘Proceedings of the Workshop on Native Fish
Management’. (Ed. B. Lawrence.) pp. 101–115. (Murray–Darling Basin Commission: Canberra, ACT, Australia.)
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Citation trail Gehrke, P. C. (1997) Differences in composition and structure of fish communities associate with flow regulation in New South Wales rivers. In ‘Fish and Rivers in
Stress: the New South Wales Rivers Survey’. (Eds J. H. Harris and P. C. Gehrke.) Pp 169-223. (New South Wales Fisheries Office of Conservation and
Cooperative Research Centre for Freshwater Ecology, Canberra, ACT, Australia.)
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Citation trail Gehrke, P. C., Gilligan, D. M., and Barwick, M. (2001) Fish communities and migration in the Shoalhaven River – Before construction of a fishway. Final report to
Sydney Catchment Authority. NSW Fisheries Final Report Series number 26.
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Citation trail Gehrke, P. C., Gilligan, D. M., and Barwick, M. (2002). Changes in fish communities of the Shoalhaven River 20 years after construction of Tallowa Dam, Australia. River Research and Applications 18(3), 265–286. doi:10.1002/rra.669
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Citation trail Hamlyn-Harris, R. (1931). A further contribution to the breeding habits of Mogurnda (Mogurnda) adspersus Castelnau, the trout gudgeon. Australian Zoologist 7(1),
55–58.
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Citation trail Hansen, B. (1988). The purple spotted gudgeon – Mogurnda adspersa. Fishes of Sahul 5(1), 200–202. Relevant Irrelevant
Citation trail Hoese, D. F., and Allen, G. R. (1983). A review of the gudgeon genus Hypseleotris (Pisces: Eleotridae) of Western Australia, with descriptions of three new species.
Records of the Western Australian Museum 10(3), 243–261.
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Citation trail Hortle, K. 1979. The effects of river improvement (channelization) on fish and aquatic invertebrates in the Bunyip River, Victoria. B.Sc.(Hons) thesis, Zoology
Department, Monash University, Clayton, Vic., Australia.
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Citation trail Humphries, P., King, A. J., and Koehn, J. D. (1999). Fish, flows and flood plains: links between freshwater fishes and their environment in the Murray–Darling River system, Australia. Environmental Biology of Fishes 56, 129–151. doi:10.1023/A:1007536009916
Relevant Irrelevant
Citation trail Humphries, P. 1983. Aspects of the biology of the dwarf galaxiid, Galaxiella pusilla (Mack) (Salmoniformes : Galaxiidae). B.Sc.(Hons) thesis, Zoology
Department, Monash University, Clayton, Vic., Australia.
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Citation trail Knight, J. T. (2000) Distribution, population structure and habitat preferences of the Oxleyan pygmy perch Nannoperca oxleyana (Whitley 1940) near Evans Head,
north-eastern New South Wales. Honours thesis, Southern Cross University, Lismore, NSW, Australia.
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Source Reference Relevance
(based on title and abstract)
Relevance
(after reading full text)
Pygmy perch & carp gudgeons
Citation trail Knight, J. T. (1999) Density Dependent Interference Competition on the Australian Native Fish Pseudomugil Signifer (KNER, 1865) by the Introduced Poeciliid Gambusia Holbrooki (GIRARD, 1859). Unpublished Integrated Project, School of Resource Science and Management, Southern Cross University, Lismore, NSW,
Australia
Relevant Irrelevant
Citation trail Koehn, J. D., and O’Connor, W. G. (1990) Biological information for management of native freshwater fish in Victoria. Department of Conservation and Environment.
Relevant Irrelevant
Citation trail Kuiter, R. H., and Allen, G. R. (1986). A synopsis of the Australian pygmy perches (Percichthyidae) with the description of a new species. Revue Francaise
Aquariologie 12(4), 109–116.
Relevant Irrelevant
Citation trail Kuiter, R. H., Humprhries, P. A., and Arthington, A. H. (1996) Family Nannopercidae. Pygmy Perches. In ‘Freshwater Fishes of South-Eastern Australia’. (Ed. R.
M. McDowall.) pp. 168–175. (Reed: Sydney, NSW, Australia.)
Relevant Irrelevant
Citation trail Lake, J. S. (1967). Rearing experiments with five species of Australian freshwater fishes I. Inducement to spawning. Australian Journal of Marine and Freshwater
Research 18, 137–153. doi:10.1071/MF9670137
Relevant Relevant
Citation trail Lake, J. S. (1967). Rearing experiments with five species of Australian freshwater fishes II. Morphogenesis and ontogeny. Australian Journal of Marine and
Freshwater Research 18, 155–173. doi:10.1071/MF9670155
Relevant Relevant
Citation trail Larson, H. K., and Hoese, D. F. (1996) Family Gobiidae, subfamilies Eleotridinae and Butinae. Gudgeons. In In ‘Freshwater Fishes of South-Eastern Australia’. (Ed.
R. M. McDowall.) pp. 200–219. (Reed: Sydney, NSW, Australia.)
Relevant Irrelevant
Citation trail Legget, R. (1990). A fish in danger – Nannoperca oxleyana. Fishes of Sahul 6(1), 247–249. Relevant Relevant Citation trail Llewellyn LC (1971) Breeding studies on the freshwater forage fish of the Murray–Darling river system. The Fisherman, 1-12 June. Relevant Irrelevant
Citation trail Llewellyn, L. C. 1983. The distribution of fish in New South Wales. Australian Society of Limnology Special Publication number 7. Relevant Irrelevant
Citation trail Lloyd, L. N. (1984). Exotic fish—useful additions or “animal weeds”. Fishes of Sahul 1(3), 31–34, 39–42. Relevant Irrelevant Citation trail Lloyd, L. N. (1987). Ecology and distribution of the small native fish of the lower River Murray, South Australia and their interactions with the exotic mosquitofish,
Gambusia affinis. M.Sc. thesis, Department of Zoology, University of Adelaide, Adelaide, South Australia.
Relevant Relevant
Citation trail Lloyd, L. N., and Walker, K. F. (1986). Distribution and conservation status of small freshwater River Murray, South Australia. Transactions of the Royal Society of South Africa 110, 49–57.
Relevant Irrelevant
Citation trail Mackay, N. J. (1973). The reproductive cycle of the firetail gudgeon, Hypseleotris galii I. Seasonal histological changes in the ovary. Australian Journal of Zoology
21, 53–66. doi:10.1071/ZO9730053
Relevant Irrelevant
Citation trail Mackay, N. J. (1973). The reproductive cycle of the firetail gudgeon, Hypseleotris galii II. Seasonal histological changes in the testes. Australian Journal of Zoology
21, 67–74. doi:10.1071/ZO9730067
Relevant Irrelevant
Citation trail Marsden, T. J., Gehrke, P. C., and Harris, J. H. (1997) Effects of Tallowa Dam on fish communities in the Shoalhaven River System. In ‘Second National Fishway Technical Workshop Proceedings’. (Eds A. P. Berghuis, P. E. Long, and I. G. Stuart.) pp 71–91. (Queensland Department of Primary Industries.)
Relevant Irrelevant
Citation trail Mitchell, P. A. (1976) A study of aspects of the behaviour and breeding biology of the southern pigmy perch Nannoperca australis australis (Gunther) (Teleostei,
Nannopercidae). B.Sc. (Hons) Thesis, Zoology Department, University of Melbourne: Melbourne
Relevant Relevant
Citation trail Sanger, A. C. 1978. Aspects of the Ecology and Evolution of the Pigmy Perches (Teleostei : Kuhliidae). B.Sc.(Hons) thesis, Zoology Department, University of
Melbourne, Parkville, Victoria.
Relevant Irrelevant
Citation trail Scott, T. D., Glover, G. J. M., and Southcott, R. V. 1980. ‘The Marine and Freshwater Fishes of South Australia’, reprinted 2nd edn). (Government Printer: South Australia.)
Relevant Irrelevant
Citation trail Shipway, B. (1949). Notes on the natural history of the pygmy perch (Nannoperca vittata). Western Australian Naturalist (Perth) 2, 1–9. Relevant Relevant
Citation trail Stoffels, R. (1998) Habitat use of gudgeons in floodplain billabong: the role of their interaction with perch and mosquitofish. Unpublished Honours Thesis. Department of Environmental Management and Ecology. LaTrobe University.
Relevant Relevant
Citation trail Unmack, P. (1992). Victorian pygmy perches. Fishes of Sahul 7(3), 321–323. Relevant Irrelevant
Citation trail Wager, R. (1992). The oxleyan pygmy perch: maintaining breeding populations. Fishes of Sahul 7(2), 310–312. Relevant Irrelevant
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Table S1. (Cont.)
Source Reference Relevance
(based on title and
abstract)
Relevance (after
reading full text)
Blackfish & flat-headed gudgeon
Search hit Copp, G. H. (2008). Putting multi-dimensionality back into niche: diel vs. day-only niche breadth separation in stream fishes. Fundamental and Applied Limnology
170, 273–280. doi:10.1127/1863-9135/2008/0170-0273
Irrelevant
Search hit Anon. (2012). Aquatic ecology; research data from Griffith University update understanding of aquatic ecology. Ecology, Environmental Conservation 429. Irrelevant Search hit Anon. (2012). Ecology Research; Research Reports on Ecology Research from University of Ballarat Provide New Insights. Engineering Business Journal 1571. Irrelevant
Search hit Anonymous (2008). Ecology; Research from W.M. Koster and co-authors yields new data on ecology. Ecology. Environment & Conservation Business 175. Irrelevant
Search hit Anonymous (2009). Aquatic ecology; reports outline aquatic ecology study findings from B. Ebner and colleagues. Ecology, Environmental Conservation 321. Irrelevant
Search hit Anonymous (2009). Marine biology; new findings from University of Canberra describe advances in marine biology. Ecology, Environmental Conservation 348. Irrelevant
Search hit Anonymous (2010). Ecology; reports from Deakin University highlight recent research in ecology. Energy & Ecology Business 1145. Irrelevant
Search hit Anonymous (2011). Bayesian analysis; research from Monash University provides new data about Bayesian analysis. Ecology, Environmental Conservation 666. Irrelevant Search hit Anonymous (2010). Drift and lure fish at Eildon. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Anonymous (2010). Good cod, why is that here? The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Anonymous (2010). Slow start to season kick-off. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant Search hit Anonymous (2010). The fishing’s just Fyans. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Anonymous (2010). Trout boost for the west. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Anonymous (2010). Yellowbelly outlook bright. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant Search hit Ashburner, L. D., and Ehl, A. S. (1973) Chilodonella cyprini (Moroff), a parasite of freshwater fish and its treatment. Available at
http://search.proquest.com.ezp.lib.unimelb.edu.au/docview/17795818?accountid=12372
Irrelevant
Search hit Atkins, L. (1979). Observations on the glochidial stage of the freshwater mussel Hyridella (Hyridella) drapeta (Iredale) (Mollusca: Pelecypoda). Australian Journal of Marine and Freshwater Research 30(3), 411–416.
Irrelevant
Search hit Balcombe, S. R., Sheldon, F., Capon, S. J., Bond, N. R., Hadwen, W. L., Marsh, N., and Bernays, S. J. (2011). Climate-change threats to native fish in degraded
rivers and floodplains of the Murray–Darling Basin, Australia. Marine and Freshwater Research 62, 1099–1114. doi:10.1071/MF11059
Relevant Irrelevant
Search hit Baumgartner, L. J. (2007). Diet and feeding habits of predatory fishes upstream and downstream of a low-level weir. Journal of Fish Biology 70, 879–894.
doi:10.1111/j.1095-8649.2007.01352.x
Irrelevant
Search hit Baumgartner, L. J., Stuart, I. G., and Zampatti, B. P. (2008). Determining diel variation in fish assemblages downstream of three weirs in a regulated lowland river. Journal of Fish Biology 72, 218–232. doi:10.1111/j.1095-8649.2007.01696.x
Relevant Irrelevant
Search hit Beumer, J. P. (1984). The Lerderderg river fish ladder. Aqua 23, 16–17. Relevant Irrelevant
Search hit Bond, N. R., and Lake, P. S. (2003). Characterizing fish-habitat associations in streams as the first step in ecological restoration. Austral Ecology 28, 611–621. doi:10.1046/j.1442-9993.2003.t01-1-01317.x
Relevant Irrelevant
Search hit Bond, N. R., and Lake, P. S. (2005). Ecological restoration and large-scale ecological disturbance: The effects of drought on the response by fish to a habitat
restoration experiment. Restoration Ecology 13, 39–48. doi:10.1111/j.1526-100X.2005.00006.x
Relevant Irrelevant
Search hit Broadhurst, B. T., Ebner, B. C., and Clear, R. C. (2009). Radio-tagging flexible-bodied fish: temporary confinement enhances radio-tag retention. Marine and
Freshwater Research 60, 356–360. doi:10.1071/MF08141
Irrelevant
Search hit Broadhurst, B. T., Dyer, J. G., Ebner, B. C., Thiem, J. D., and Pridmore, P. A. (2011). Response of two-spined blackfish Gadopsis bispinosus to short-term flow fluctuations in an upland Australian stream. Hydrobiologia 673, 63–77. doi:10.1007/s10750-011-0750-0
Relevant Irrelevant
Search hit Broadhurst, B. T., Lintermans, M., Thiem, J. D., Ebner, B. C., Wright, D. W., and Clear, R. C. (2012). Spatial ecology and habitat use of two-spined blackfish
Gadopsis bispinosus in an upland reservoir. Aquatic Ecology 46, 297–309. doi:10.1007/s10452-012-9401-4
Relevant Irrelevant
Search hit Bycroft, B. M., Coller, B. A. W., Deacon, G. B., Coleman, D. J., and Lake, P. S. (1982). Mercury contamination of the Lerderderg River, Victoria, Australia, from an
abandoned gold field. Environmental Pollution – A 28(2), 135–147. doi:10.1016/0143-1471(82)90099-X
Relevant Irrelevant
Search hit Chapman, A., Hobbs, R. P., Morgan, D. L., and Gill, H. S. (2006). Helminth parasitism of Galaxias maculatus (Jenyns 1842) in southwestern Australia. Ecology Freshwater Fish 15, 559–564. doi:10.1111/j.1600-0633.2006.00198.x
Irrelevant
Search hit Cooper, S. (2010). Cod jackpot tops 16 kg. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant Search hit Cooper, S. (2010). Mountains of trout on offer. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Cooper, S. (2010). Tiny natives on radar. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Marine and Freshwater Research © CSIRO 2018
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Source Reference Relevance
(based on title and
abstract)
Relevance (after
reading full text)
Blackfish & flat-headed gudgeon Search hit Cooper, S. (2010). Trout is tops in fishing mixed bag. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Cooper, S. (2011). Blackwater blues for Murray anglers. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Cooper, S. (2011) Plenty biting in the lakes. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant Search hit Cooper, S. (2011) Wide choice for salt and freshwater fishers. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Cooper, S. (2012) Yellowbelly running in the Murray. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant
Search hit Cooper, S. (2013) Hefty tuna to 43 kg at Portland. The Weekly Times, Melbourne, Vic., Australia, Melbourne, Vic. Irrelevant Search hit Davies, P. E. (1989). Relationships between habitat characteristics and population abundance for brown trout, Salmo trutta L, and blackfish, Gadopsis marmoratus
Rich, in Tasmanian streams. Australian Journal of Marine and Freshwater Research 40, 341–359.
Relevant Irrelevant
Search hit Dobson, G., and Baldwin, J. (1978). Intra-erythrocytic modulation of hemoglobin oxygen-affinity in fresh-water blackfish Gadopsis marmoratus. Proceedings of the
Australian Biochemical Society 11, 30–30.
Irrelevant
Search hit Dobson, G. P., and Baldwin, J. (1982). Regulation of blood oxygen affinity in the Australian blackfish Gadopsis marmoratus I. Correlations between oxygen-binding
properties, habitat and swimming behaviour. The Journal of Experimental Biology 99, 223–243.
Relevant Irrelevant
Search hit Dobson, G. P., and Baldwin, J. (1982). Regulation of blood oxygen affinity in the Australian blackfish Gadopsis marmoratus II. Thermal acclimation. The Journal of
Experimental Biology 99, 245–254.
Irrelevant
Search hit Doeg, T. J., and Koehn, J. D. (1994). Effects of draining and desilting a small weir on downstream fish and macroinvertebrates. Regulated Rivers: Research and Management 9, 263–277. doi:10.1002/rrr.3450090407
Relevant Irrelevant
Search hit Donald, J. A. (1987). Comparative study of the adrenergic innervation of the teleost gill. Journal of Morphology 193, 63–73. doi:10.1002/jmor.1051930107 Irrelevant
Search hit Droz, M., Staub, E., and Steiner, P. A. (2006) Decreasing angling catch and fish distribution patterns indicate reduced ecological integrity in Swiss rivers. Schweizerbartsche Verlagsbuchhandlung, Stuttgart (Germany)
Irrelevant
Search hit Ebner, B., Clear, R., Godschalx, S., and Beitzel, M. (2009). In-stream behaviour of threatened fishes and their food organisms based on remote video monitoring.
Aquatic Ecology 43, 569–576. doi:10.1007/s10452-008-9192-9
Relevant Irrelevant
Search hit Ebner, B. C., Thiem, J. D., Gilligan, D. M., Lintermans, M., Wooden, I. J., and Linke, S. (2008). Estimating species richness and catch per unit effort from boat
electro-fishing in a lowland river in temperate Australia. Australian Journal of Ecology 33, 891–901. doi:10.1111/j.1442-9993.2008.01862.x
Relevant Irrelevant
Search hit Fielder, D. S., Hay, A. C., and Trnski, T. (2005). Larval development of estuary perch (Macquaria colonorum) and Australian bass (M. novemaculeata) (Perciformes: Percichthyidae), and comments on their life history. Fishery Bulletin 103, 183.
Irrelevant
Search hit Gibson, D. I., Bray, R. A., and Langdon, J. S. (1990). Dactylostomum cribbi n. sp., a new opecoeline digenean from the Australian freshwater fish Gadopsis
marmoratus Richardson. Systematic Parasitology 17, 75–80. doi:10.1007/BF00009793
Irrelevant
Search hit Gillespie, G. R. (2001). The role of introduced trout in the decline of the spotted tree frog (Litoria spenceri) in south-eastern Australia. Biological Conservation 100,
187–198. doi:10.1016/S0006-3207(01)00021-0
Irrelevant
Search hit Giraud, A. S., and Yeomans, N. D. (1982). Cell types of the gastric mucosa of a teleost, the river blackfish, Gadopsis marmoratus. Australian Journal of Marine and Freshwater Research 33, 1103–1108. doi:10.1071/MF9821103
Irrelevant
Search hit Giraud, A. S., and Yeomans, N. D. (1982). Comparative distribution of pepsinogen in the chordate gastric mucosa from representatives of five classes. Comparative
Biochemistry and Physiology – B. Comparative Biochemistry 72, 145–147. doi:10.1016/0305-0491(82)90024-4
Irrelevant
Search hit Goerner, M. (2006) Influence of cormorand (Phalacrocorax carbo) and other piscivorous birds on fish fauna of running waters in Middle Europe. Available at
http://search.proquest.com.ezp.lib.unimelb.edu.au/docview/17277915?accountid=12372
Irrelevant
Search hit Griffiths, S. P., and West, R. J. (1999). Preliminary assessment of shallow water fish in three small intermittently open estuaries in southeastern Australia. Fisheries Management and Ecology 6, 311–321. doi:10.1111/j.1365-2400.1999.tb00082.x
Relevant Irrelevant
Search hit Growns, I. (2008). The influence of changes to river hydrology on freshwater fish in regulated rivers of the Murray-Darling basin. Hydrobiologia 596, 203–211.
doi:10.1007/s10750-007-9097-y
Relevant Irrelevant
Search hit Growns, I., Gehrke, P. C., Astles, K. L., and Pollard, D. A. (2003). A comparison of fish assemblages associated with different riparian vegetation types in the
Hawkesbury-Nepean River system. Fisheries Management and Ecology 10, 209–220. doi:10.1046/j.1365-2400.2003.00337.x
Relevant Irrelevant
Search hit Hammer, M. P., and Walker, K. F. (2004). A catalogue of South Australian freshwater fishes, including new records, range extensions and translocations. Transactions of the Royal Society of South Australia 128, 85–97.
Irrelevant
Search hit Harris, J. H., and Silveira, R. (1999). Large-scale assessments of river health using an Index of Biotic Integrity with low-diversity fish communities. Freshwater Biology 41, 235–252. doi:10.1046/j.1365-2427.1999.00428.x
Relevant Irrelevant
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Source Reference Relevance
(based on title and
abstract)
Relevance (after
reading full text)
Blackfish & flat-headed gudgeon Search hit Hermoso, V., Linke, S., and Prenda, J. (2009). Identifying priority sites for the conservation of freshwater fish biodiversity in a Mediterranean basin with a high
degree of threatened endemics. Hydrobiologia 623, 127–140. doi:10.1007/s10750-008-9653-0
Irrelevant
Search hit Howson, T. J., Robson, B. J., and Mitchell, B. D. (2010). Patch-specific spawning is linked to restoration of a sediment-disturbed lowland river, south-eastern Australia. Ecological Engineering 36, 920–929. doi:10.1016/j.ecoleng.2010.04.007
Relevant Irrelevant
Search hit Howson, T. J., Robson, B. J., Matthews, T. G., and Mitchell, B. D. (2012). Size and quantity of woody debris affects fish assemblages in a sediment-disturbed
lowland river. Ecological Engineering 40, 144–152. doi:10.1016/j.ecoleng.2011.12.007
Relevant Irrelevant
Search hit Hume, D. J. (1979) Census of fish in the Tullaroop Creek System, Victoria Relevant Irrelevant
Search hit Humphries, P., Serafini, L. G., and King, A. J. (2002). River regulation and fish larvae: Variation through space and time. Freshwater Biology 47, 1307–1331.
doi:10.1046/j.1365-2427.2002.00871.x
Relevant Relevant
Search hit Jackson, P. D. (1978). Benthic invertebrate fauna and feeding relationships of brown trout, Salmo trutta Linnaeus, and river blackfish, Gadopsis marmoratus
Richardson, in the Aberfeldy River, Victoria. Australian Journal of Marine and Freshwater Research 29, 725–742. doi:10.1071/MF9780725
Relevant Relevant
Search hit Jackson, P. D. (1978). Spawning and early development of the river blackfish, Gadopsis marmoratus Richardson (Gadopsiformes: Gadopsidae), in the McKenzie River, Victoria. Australian Journal of Marine and Freshwater Research 29, 293–298. doi:10.1071/MF9780293
Relevant Irrelevant
Search hit Jaramillo, D., Tweedie, A., Becker, J. A., Hyatt, A., Crameri, S., and Whittington, R. J. (2012). A validated quantitative polymerase chain reaction assay for the
detection of ranaviruses (Family Iridoviridae) in fish tissue and cell cultures, using EHNV as a model. Aquaculture 356-357, 186–192. doi:10.1016/j.aquaculture.2012.05.017
Irrelevant
Search hit Jasonsmith, J. F., Maher, W., Roach, A. C., and Krikowa, F. (2008). Selenium bioaccumulation and biomagnification in Lake Wallace, New South Wales, Australia.
Marine and Freshwater Research 59, 1048–1060. doi:10.1071/MF08197
Relevant Irrelevant
Search hit Jenkins, K. M., Kingsford, R. T., Closs, G. P., Wolfenden, B. J., Matthaei, C. D., and Hay, S. E. (2011). Climate change and freshwater ecosystems in Oceania: an
assessment of vulnerability and adaptation opportunities. Pacific Conservation Biology 17, 201–219. doi:10.1071/PC110201
Irrelevant
Search hit Jerry, D. R., Elphinstone, M. S., and Baverstock, P. R. (2001). Phylogenetic relationships of Australian members of the family Percichthyidae inferred from mitochondrial 12S rRNA sequence data. Molecular Phylogenetics and Evolution 18, 335–347. doi:10.1006/mpev.2000.0871
Irrelevant
Search hit Kazlauskiene, N., Kesminas, V., Marciulioniene, D., and Montvydiene, D. (2011). Makrofitu ir zuvu rusine kaita druksiu ezere--ignalinos atomines elektrines
ausinimo baseine (1988–2008). Journal of Environmental Engineering and Landscape Management 19, 21. [Changes in macrophytes and fish communities in the cooler of Ignalina Nuclear Power Plant (1988–2008)].
Irrelevant
Search hit Khan, M. T., Khan, T. A., and Wilson, M. E. (2004). Habitat use and movement of river blackfish (Gadopsis marmoratus R.) in a highly modified Victorian stream,
Australia. Ecology Freshwater Fish 13, 285–293. doi:10.1111/j.1600-0633.2004.00068.x
Relevant Irrelevant
Search hit Khan, M. T., Khan, T. A., et al. (2001) Habitat assessment of river blackfish (Gadopsis marmoratus Richardson) in Victorian streams. Available at
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Irrelevant
Search hit Kilsby, N. N., and Walker, K. F. (2010). Linking the swimming ability of small freshwater fish to body form and ecological habit. Transactions of the Royal Society of South Australia 134, 89–96. doi:10.1080/3721426.2010.10887132
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Search hit Kilsby, N. N., and Walker, K. F. (2012). Behaviour of two small pelagic and demersal fish species in diverse hydraulic environments. River Research and
Applications 28, 543–553. doi:10.1002/rra.1466
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Search hit King, A. J., Humphries, P., and Lake, P. S. (2003). Fish recruitment on floodplains: The roles of patterns of flooding and life history characteristics. Canadian
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Research, Fisheries Division, Victoria.
Relevant Irrelevant
Citation trail Westergaard, S., and Ye, Q. (2010) A captive spawning and rearing trial of river blackfish (Gadopsis marmoratus): efforts towards savings local genetic assets with recognised conservation significance from the South Australian Murray–Darling Basin. Report to Department of Environment and Heritage. SARDI Publication
Number F2010/000183-1, SARDI Research Report Series number 471, South Australian Research and Development Institute (Aquatic Sciences), Adelaide, SA,
Australia.
Relevant Relevant
ASame data as Vilizzi (2012) BSame data as Jackson (1978)
Table S2. Detailed results for each of the two rapid evidence assessments Hypothesis Evidence
item
Reference Cause Effect Life stage Species Support Refute Summary
Suport Refute Overall Veredict
Pigmy Perch
1. Spring water
temperatures above
21 C will result in greater spawning
success
1 Mackay
(1974)
Water temperature Spawning success reproduction Hypseleotris galii 7 31 21 10 Inconsistent
evidence
2 Llewelyn (2006)
Water temperature Spawning success reproduction Mogurnda adspersa 3
3 King et al
(2003)
Water temperature Spawning success reproduction Hypseleotris spp. 3
4 Stuart et al
(2008)
Water temperature Spawning success reproduction Hypseleotris spp. 1
5 Llewelyn (1974)
Water temperature Spawning success reproduction Nannoperca australis 3
6 Pen & Potter
(1991)
Water temperature Spawning success reproduction Nannoperca vittata 3
7 Humphries
(1995)
Water temperature Spawning success reproduction Nannoperca australis 3
8 Vilizzi (2012) Water temperature Spawning success reproduction Hypseleotris spp. 7 9 Knight et al
(2007)
Water temperature Spawning success reproduction Nannoperca oxleyana 5
10 Lake (1967) Water temperature Spawning success reproduction Hypseleotris klunzingeri 3 11 Blewett
(1929)
Water temperature Spawning success reproduction Mogurnda adspersa 1
12 Mitchell (1976)
Water temperature Spawning success reproduction Nannoperca australis 3
13 Mitchell
(1976)
Water temperature Spawning success reproduction Nannoperca australis 1
14 Arthington &
Marshall
(1993)
Water temperature Spawning success reproduction Nannoperca oxleyana,
Hypseleotris compressa,
Hypseleotris galii
3
15 Arthington
(1996)
Water temperature Spawning success reproduction Nannoperca oxleyana 3
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Hypothesis Evidence
item
Reference Cause Effect Life stage Species Support Refute Summary
Suport Refute Overall Veredict Pigmy Perch
16 Humphries
(2002)
Water temperature Spawning success reproduction Hypseleotris spp. 3
2. Spring water
temperatures above
21 C will increase survival of eggs
and larvae
17 Llewelyn
(1974)
Water temperature Fish mortality egg Nannoperca australis 3 5 14 9 Insufficient
evidence
18 Lake (1967) Water temperature Fish mortality egg, prolarvae
Hylseleotris klunzingeri 3
19 Blewett
(1929)
Water temperature Fish mortality egg Mogurnda adspersa 4
20 Gale (1914) Water temperature Fish mortality egg Mogurnda adspersa 1
21 Mitchell
(1976)
Water temperature Fish mortality egg Nannoperca australis 3
22 Shipway
(1949)
Water temperature Fish mortality egg Nannoperca vittata 5
3. The absence of spring high flows
during spawning
will increase survival of eggs
and larvae
23 McMaster & Bond
(2008)
Water volume Fish abundance eggs and larvae
Hypseleotris klunzingeri 1 13 0 13 Insufficient evidence
24 King et al (2003)
Water volume Fish reproduction eggs and larvae
Hypseleotris spp. 3
25 Beesley et al
(2011)
Flow seasonality Fish abundance larvae Hypseleotris sp. 9
4. The presence of
late-spring high
flows after spawning will
increase survival of
juveniles and adults
26 Ho et al
(2013)
Water volume Fish abundance YOY Hypseleotris sp. 3 27 3 24 Support for
hypothesis
27 Beesley et al (2012)
Flow duration Fish abundance juvenile Hypseleotris sp. 9
28 Tonkin et al
(2008)
Flow duration Fish abundance YOY Nannoperca australis 3
29 Beesley et al
(2011)
Flow seasonality Fish abundance juvenile Hypseleotris sp. 9
30 Bice 2014 Water volume Fish abundance adult Hypseleotris sp. 3 31 Costelloe et al
(2010)
Water volume Fish abundance juvenile Hypseleotris sp. 3
5. An increase in cold water
pollution will
decrease survival of juveniles and
adults
32 Blewett (1929)
Water temperature Fish gasping adult Hypseleotris klunzingeri 3 3 0 3 Insufficient evidence
6. Low dissolved oxygen levels will
decrease survival
of juveniles and adults
33 McMaster & Bond
(2008)
Dissolved oxygen Fish abundance adult; YOY Nannoperca australis; Hypseleotris klunzingeri
3 13 3 10 Insufficent evidence
34 McMaster & Bond
(2008)
Dissolved oxygen Fish mortality adult Nannoperca australis; Hypseleotris klunzingeri
7
35 Knight & Arthington
(2008)
Dissolved oxygen Fish abundance adult Nannoperca oxleyana 3
Marine and Freshwater Research © CSIRO 2018
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Page 29 of 30
Hypothesis Evidence
item
Reference Cause Effect Life stage Species Support Refute Summary
Suport Refute Overall Veredict Pigmy Perch
36 Gee & Gee
(1991)
Dissolved oxygen Fish behaviour Gobiomorphus australis,
Hypseleotris compressa, Hypseleotris galii
3
7. An increase in
exotic fish abundance will
decrease survival
of juveniles and adults.
37 Mazumder et
al (2012)
Water volume Fish competition adult &
YOY
Hypseleotris v Carp 5 38 3 35 Support for
hypothesis 38 Stoffels &
Humphries
(2003)
Exotic fihs
invasion
Fish competition YOY Hypseleotris v Gambusia 3
39 Woodward &
Malone
(2002)
Exotic fihs
invasion
Fish mortality presumed
adult
Nannoperca obscura, N
australis v Redfin
4
40 Knight et al
(2012)
Exotic fihs
invasion
Fish behaviour presumed
adult
Nannoperca oxleyana v
Gambusia
1
41 Arthington et al (1983)
Exotic fihs invasion
Fish abundance presumed adult
Hypseleotris galii, H. compressa, Mogurnda
adspersa v Gambusia
9
42 Arthington & Marshall
(1993)
Exotic fihs invasion
Fish competition presumed adult
Nannoperca oxleyana, Hypseleotris compressa,
Hypseleotris galii
3
43 Stoffels (1998)
Exotic fihs invasion
Fish abundance adult & YOY
Hypseleotris v. Perca fluviatilis
3
44 Stoffels
(1998)
Exotic fihs
invasion
Fish behaviour adult Hypseleotris v. Perca
fluviatilis
7
45 Lloyd (1987) Exotic fihs
invasion
Fish mortality adult &
YOY
Nannoperca australis &
Hypseleotris klunzingeri v.
Gambusia (also available for Perca)
4
46 Legget (1990) Exotic fihs
invasion
Fish abundance - Nannoperca oxleyana v
Gambusia
2
Table S2. (Cont.)
Hypothesis Evidence
item
Reference Cause Effect Life stage Species Support Refute Summary
Suport Refute Overall Veredict
Blackfish
1. Water temperatures above
16 C will result in greater
spawning success
1 O'Connor &
Zampatti
(2006)
Water
temperature
Spawning
success
reproduction Gadopsis bispinosus 3 15 16 1 Inconsistent
evidence
2 Vilizzi (2012) Water
temperature
Spawning
success
reproduction Philypnodon
grandiceps
7
3 Humphries (2002)
Water temperature
Spawning success
reproduction Philypnodon grandiceps and
Gadopsis
marmoratus
3
4 Sanger (1990) Water
temperature
Spawning
success
reproduction Gadopsis bispinosus 3
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Hypothesis Evidence
item
Reference Cause Effect Life stage Species Support Refute Summary
Suport Refute Overall Veredict Blackfish
5 Sanger (1986) Water
temperature
Spawning
success
reproduction Gadopsis bispinosus
and Gadopsis marmoratus
9
6 Lintermans
(1998)
Water
temperature
Spawning
success
reproduction Gadopsis bispinosus 5
7 Westergaard &
Ye (2010)
Water
temperature
Spawning
success
reproduction Gadopsis marmoratus 1
2. An increase in winter bankfull flow volumes will
improve pre-spawning
condition
8 Lintermans (1998)
Physical habitat
Pre-spawning condition
reproduction Gadopsis bispinosus 5 5 0 5 Insufficient evidence
3. The absence of late-spring
high flows after spawning
will increase survival of eggs and larvae
- - - - - - - - - - - -
4. A slow rate of change in
flow will increase juvenile survival
- - - - - - - - - - - -
5. Low dissolved oxygen
levels will decrease survival of juveniles and adults
9 Gee & Gee
(1991)
Dissolved
oxygen
Fish behaviour adult Philypnodon
grandiceps & Philypnodon sp.
3 3 0 3 Insufficient
evidence
6. An increase in exotic fish
abundance will decrease survival of juveniles and
adults.
10 Lloyd (1987) Exotic fihs
invasion
Fish behaviour adult Philypnodon spp v
Gambusia
3 13 4 9 Insufficient
evidence 11 Jackson (1978) Exotic fihs
invasion
Fish
competition
adult Gadopsis marmoratus
v Salmo trutta
3
12 Fletcher (1979) Exotic fihs invasion
Fish competition
adult and YOY
Gadopsis marmoratus v Salmo trutta
3
13 Lintermans
(1998)
Exotic fihs
invasion
Fish
competition
adult and
YOY
Gadopsis bispinosus v
Oncorhyncus mykiss
3
14 Lewis (1917) Exotic fihs
invasion
Fish abundance adult Gadopsis v Trout and
Perch
4
15 Cox (1917) Exotic fihs invasion
Fish mortality adult and YOY
Gadopsis v Trout 1
