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Diffraction Image Library

Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

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Page 1: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Diffraction Image Library

Page 2: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

What is new with it?

• Now support Oxford-Diffraction, CBF and mini-CBF

• Integrated into ccp4-6.1

• Development of a masking function

• Image viewer in ccp4i

• Java JNI module available

Page 3: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

The Masking function

• This function is designed to help data processing people by attempting to automagically generate a mask that would cover the backstop and the arm of the backstop if present

Page 4: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Is it any good?

• If the problem is easy, the answer is quick(-ish).

• If it is complicated it might take a while depending on the size of the image. But very rarely more than 30-35 s.

Page 5: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Some results

Page 6: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Some results

Page 7: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Some results

Page 8: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Some results

Page 9: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Some results

Page 10: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Ccp4i image viewer

• Maximum images

• Movie sequences

• Resolution circles

• Intensity profiles

• Saving images/movies

Page 11: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Maximum images

Page 12: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Movie sequences

Page 13: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Intensity profile

Page 14: Diffraction Image Library. What is new with it? Now support Oxford-Diffraction, CBF and mini-CBF Integrated into ccp4-6.1 Development of a masking function

Diffraction Image plans

• Developing a reliable detector gain estimation function

• Support to more detectors (mar555 and other as requested)

• Looking at ideas to improve the masking function

• Developing the beam correction function• Develop new features for the image

viewer