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Diverse Disciplines in Chemistry
Medicinal Chemistry in the Practice of
Pharmacy
Robin M. Zavod, PhD
First: Who is Sitting Next to You?
Dust off the Rust! Rev up the Brain Cells! Get the pie-hole working again! ICE BREAKER!
– Work with a group of 3-4 people to identify as many Wacky Wordies as you can!
Second: What’s the Plan Tonight?
Careers in Chemistry Introduction: What is Pharmacy?
What is Medicinal Chemistry? Examples: How is Medicinal
Chemistry used in the Practice of Pharmacy?
– Histamine (receptors)– Cyclo-oxygenase (enzymes)
What is Pharmacy?
Past: Dispense Medications– Pharmacist isn’t involved with patient education
Present: Providers of Pharmaceutical Care– Dispensing role de-emphasized– Pharmacists are drug information specialists
Future: Individualized Medicine– Genetic information directs medication selection
What is Medicinal Chemistry?
Drug Mechanism of Action Structure Activity Relationships
– Drug structure predicts biological activity
ADME: Absorption, Distribution, Metabolism, Excretion – Tweaking functional groups and formulation
Interactions: Biological Target for Drug Action– Optimization of drug potency
Melding the Two Disciplines
If Pharmacists are the drug information specialists, what kind of information do they need to know?
If Medicinal Chemists are the creators of new drug entities, what kind of information do they need to know?
Patient Case #1
E.M., a 43 year old mother of two teenage boys, walks into the pharmacy and says "Getting my two boys off to school this fall will be a challenge. It is more than my head can take at that time of the morning, not to mention my stomach! I can’t believe how bad the allergy season has already been.”
Allergies: Sequence of Events
Allergens elicit release of histamine from mast cells
Histamine receptors are activated Physiological responses are generated
– Hives/Rash– Runny nose/itchy eyes– Wheezing
What does it take to stop this process?
Indigestion: Sequence of Events
Release of histamine into GI tract– Overeating, excess consumption of alcohol– Stress; Some medications
Histamine receptors are activated Physiological response is generated
– Increased gastric acid production– Irritation/ulceration of mucosal lining of the
stomach What does it take to stop this process?
Are all Histamine Receptors the Same?
Based on your own knowledge, do either of these scenarios make sense?– Take a dose of Benadryl® to settle your stomach?– Take a dose of Pepcid® to stop your eyes from
itching and your nose from running?
Benadryl® = antihistamine right? Pepcid® = antihistamine too?
Chemists to the Rescue!
All histamine receptors are activated by histamine (histamine = agonist)
Activation of histamine receptors produces different biological responses
Histamine receptors: H1, H2, H3 and now H4!! Location of receptors vary
– Peripheral tissues, CNS, GI tract
What does Histamine look like?
Imidazole – planar Bridge – carbon based Ionizable group (amine) Acid/Base Chemistry
– Drug ionization
Binding Interactions:– Ionic or ion dipole - stacking
Histamine
N
N
H
NH2
What is an “Antihistamine”?
What happens when a drug binds to a histamine receptor and prevents histamine from binding?
Therapeutically: Benadryl® = Histamine blocker (antagonist)
Chemically: H1 receptor antagonist Therapeutically: Pepcid® = Acid blocker Chemically: H2 receptor antagonist
1st Generation Antihistamines (H1)
N
S
CH3
CH3
NCH3
Promethazine (Phenergan) Diphenhydramine (Benadryl)
ON
CH3
CH3
Clemastine (Tavist)
O
Cl
H3C
NCH3
Chlorpheniramine (Chlortrimeton)
N
N
CH3
CH3
Cl
Structural Eval: Pharmacophore
Hydrophobic, planar groups Ionizable functional group present Defined distance between hydrophobicity
and ionizable functional group (amine) Additional bulk allowed What do these agents mimic?
– Why don’t they activate the histamine receptor?
Therapeutic Effects Observed
Secretions dry up Hives/rash stop itching Eyes stop itching/burning
Side Effect: Dry mouth Side Effect: Sleepiness/lethargy Compliance Issue: q4-6H dosing
Where do Side Effects come from?
Biology: Receptors located in both peripheral tissues and in the CNS
Chemistry: H1 receptor antagonists aren’t geographically selective
From a biological and structural perspective, why do we experience these side effects?
Can Medicinal Chemists fix this problem?– YES!!!
2nd Generation Antihistamines (H1)
Fexofenadine(Allegra)
HO
NOH
CH3C CO2H
CH3N
N
Cl
O OCH2CH3
Loratidine(Claritin)
N
OOH
O
N
ClCetirizine(Zyrtec)
Any Structural Differences?
Hydrophobic, planar functional groups Short bridge to ionizable functional group Ionizable functional group (amine) And…..
– Hydrophilicity that is ionizable!
Does Patient Experience Change?
What happens to the therapeutic effect?
What happens to the side effect profile?
What happens to patient compliance?
Back to Indigestion…
ON S
N
CH3
H3C
HCNO2
NCH3
H H
Ranitidine(Zantac)
N
S
SN
NSO2NH2
CH3
NH2N
NH2
H
Famotidine(Pepcid)
N
CH3
H3C
S
NO2HC
CH3NN
N
S
H H
Nizatidine(Axid)
N NH
H3CS
N
NCN
NCH3
H H
Cimetidine(Tagamet)
Structural Eval: Pharmacophore
Planar heterocycle– Not necessarily hydrophobic
Bridge to ionizable functional group Ionizable functional group (amine) Bridge to functional group capable of H-
bonding with receptor Small hydrophobic groups
Model: H2 Receptor Binding
Hydrogen Bonding
Bidentate Binding
Small HydrophobicPocketSmall Hydrophobic
Hydrophobic Pocket for Aromatic Rings
ComplementaryAnionic Binding
O
O
N
S
S
N
NH2
H3N
NH
CH3
SO2NH2N
H2 Receptors and Antagonists
Receptors located exclusively in the GI tract Remember: Activation of H2 receptor causes
increased production of gastric acid Drugs are called “acid blockers”, what are
they really? No H2 receptors located in the periphery or in
the CNS, so there aren’t any side effects, right?
Metabolism: Adverse Drug Reactions
Mostly Drug-Drug Interactions– Most significant with cimetidine (Tagamet®)– Serious problem in pharmacy (OTC meds)
Is there a structural basis for this?– Yes! Imidazole interferes with metabolic enzymes
Can you design out this problem?– Yes! Replace imidazole with a bioisostere!
Medicinal Chemistry Roles
Design more potent derivatives– Decrease dosing frequency– Increase patient compliance
Design more selective analogs– Decrease side effect profile– Decrease adverse drug reactions
Patient Case #2
A refill prescription for naproxen sodium (Anaprox; Aleve) was called in by DR, a patient who is training for an upcoming 10K race. The last time he picked up his meds he complained that even though he had dropped his weekly mileage, he was still experiencing mild pain in his left knee between doses of naproxen. Today DR stops by the pharmacy to pick up his refill along with several gallons of a popular “sports drink” that contains a high concentration of sodium citrate. While paying for his medication you ask him, “How much of that stuff do you consume?” DR says that he consumes nearly a gallon of the “sports drink” daily.
Excretion: Drug-Food Interaction
Information to Consider:– Drug pKa = 4.2– Normal urine pH = 5-6– Sport drink basifies the urine
to ~7.5
Decreased therapeutic effect observed – Why?
Can Medicinal Chemists fix this problem?
– Uh….
CH3O
CH3
O
O-Na+
Naproxen Sodium(Anaprox, Aleve)
Non-steroidal Anti-inflammatory Drugs
O CH3
CO2H
Ketoprofen (Orudis)
N
O
H
CO2H
CH3
H3C
Etodolac(Lodine)
Acetaminophen(Tylenol)
N CH3
H
OHO
CH3
O
CH3O
Nambumetone(Relafen)
Structure Activity Relationships
Acidic functional group is required (“no”)– Carboxylic acid bioisosteres allowed
One carbon bridge (critical length) Planar functional group
– Aromatic hydrocarbon or heterocycle
Relafen®: bioactivation to acidic metabolite required
Additional Patient Information
DR calls the pharmacy with a question that he forgot to ask you. He wants to know if it is “ok” for him to take a couple of Tums® or some Maalox® for the moderate stomach upset that he gets when he takes the naproxen sodium on an empty stomach.
Absorption: Acid/Base Chemistry
Information to Consider– Normal stomach pH = 1– Drug pKa = 4.2– FDA Definition: The antacid product must
neutralize at least 5 mEq of acid per recommended dose and must maintain a pH of 3.5 for 10 minutes in an in vitro test.
Will the antacid have any effect on drug absorption? What do you tell the patient?
Inflammation: Target for Drug Action
Cyclo-oxygenases (COX-1, COX-2 and COX-3!!)– Catalyze biosynthesis of prostaglandins PGG2, PGH2, PGE2
from arachidonic acid
PGG2 roles – Mediates response to pain– Mediates inflammatory response
PGH2 role– Mediates response to pain
PGE2 role– Protects gastroduodenal mucosa by several mechanisms
Therapeutic Effects Observed
Decreased or modulated pain response– Inhibition of COX-1 and COX-2 enzymes
Improved joint mobility– Inhibition of COX-1 and COX-2 enzymes
Decreased patient compliance (over time)– Side Effect: GI upset
Side Effect: GI upset
What is the cause of this side effect?
Can Medicinal Chemists fix this problem?– COX-1 vs. COX-2 enzymes– Active/catalytic sites are nearly identical– Physiological functions differ considerably
Can we design COX-2 selective inhibitors?– YES!!!
COX-2 Selective Inhibitors
Rofecoxib(Vioxx)
O
S
O
O
H3C
O
Valdecoxib(Bextra)
NO
S
O
O
H2NCH3
Lumiracoxib(Prexige)
CO2H
NH
ClF
H3C
N N
S
O
O
H2N
H3C
CF3
Celecoxib(Celebrex)
Did we solve the problem?
Continued GI upset possible– We achieved Selectivity not Specificity– Contraindicated in patients on Warfarin®
Allergy Potential– Fraction of population allergic to “sulfa” drugs– Some COX-2 selective agents have sulfonamide
Medicinal Chemistry + Pharmacy
Drug Structure Activity Relationships– Potency– Dosing frequency
Selectivity vs. Specificity– Side effect and adverse drug effect profiles
ADME– Functional group manipulation– Drug-drug, drug-food interactions– Metabolic interference
Acknowledgements
Dr. Jeffrey Jankowski (ACCA Coordinator) Drs. Shridhar Andurkar, Robert Chapman,
Jeffrey Christoff and Bruce Currie (MWU-CCP Faculty)
Ms. Angela Karash, MSc. (Teaching Assistant)
THANK YOU!!
Any Questions? Thoughts? Suggestions?