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Downloading_and_Installing_R_010809 (5) Page 1 of 11 Downloading and installing ‘R’ Step 1: Go to: http://probability.ca/cran/ This is the U of T download site. You should see: Choose your operating system

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Page 1: Downloading and installing ‘R’ - preventovariancancermedbio.utoronto.ca/sites/all/themes/nexus/MBP1010Content... · Downloading_and_Installing_R_010809 (5) Page 7 of 11 ‘R’

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Downloading and installing ‘R’ Step 1: Go to: http://probability.ca/cran/ This is the U of T download site. You should see:

Choose your operating system

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You will now see:

You will then see:

Choose “Base”

Choose: “R-2.8.1…..” This is the latest version of ‘R’

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Install as you would any new download…

Click “Next”

Click “Next”

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If you have enough disk space, check the PDF help manuals

Click “Next”

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Click “Next”

Click “Next”

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Click “Next”

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‘R’ is now installed on your system. But we are not yet done… Now we will pre-download a couple of functions that we will need during the workshop. Normally, when you are connected to an internet connection you would do this work ‘on the fly’ – but we will not have an internet connection in the workshop so we will do a little work now. During the workshop I will show you how we normally would accomplish this task.

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Downloading packages: Step 1: Create a folder in which you will download some extra R ‘packages’ (functions) I am creating mine as: C:\Documents and Settings\J. Charles Victor\My Documents\RCAT\INTRO_TO_R\ForBiomed\ExtraFunctions It does not matter where you create this folder, just remember where this is located for the workshop.

Step 2: Navigate back to: http://probability.ca/cran/ and click on your operating system…

Choose “contrib”

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Click “2.8”

You will then see: You will then see a list of zip files. Scroll down until you see the “car__1.2-11.zip” link (NOTE: Although in alphabetical order, the list is in real alphanumeric order. So all of the names beginning with capital letters are first, so keep scrolling until you find small c- car….:

Click “car__1.2-11.zip”

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Save the “car” zip file to the folder that you created. Now scroll down to the link titled: “ gmodels__2.14.1.zip ” Save this file to the folder that you created

Click “gmodels__2.14.1.zip”

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Now scroll down to the link titled: “ psych__1.0-62.zip ” Save this file to the folder that you created

OK, now we will be ready to begin!

Click “psych__1.0-62.zip”