1
INTRODUCTION RESULTS Biogenic amines (BA) are nitrogenous compounds with important biological activities. However, due to the metabolism of certain bacteria, BA can accumulate in high concentrations in food and its consumption constitutes a toxicological threat. Cheese is one of the foods that higher concentrations of BA can accumulate, being some lactic acid bacteria (LAB) the main BA-producers (Linares et al., 2012). Consequently, most of the methods proposed for reducing BA in food, based on reducing the presence of BA-producing bacteria, have failed to solve the problem, and they also affect non- BA producing LAB that are essential in the development of the organoleptic characteristics of cheese. Therefore, new and more specific solutions are needed. Bacterio(phages) have arisen as a promising antimicrobial weapon both in clinical and food safety applications. They present some properties that made them ideal biotechnological tools against food spoilage microorganisms such as BA-producing bacteria: they are extremely host-specific, food-grade, have a long shelf life, are able to resist the environmental stresses encountered during food processing, and since they are self-replicating and self-limiting, low dosages can be employed. In this communication, we present the isolation and further characterization of dairy phages against Enterococcus faecalis, the species mainly responsible of the accumulation of tyramine and putrescine in cheese. Among them, we have chosen phages Q69 and 156 for an in deep characterization and to perform a proof-of-concept challenge to reduce the presence of tyramine and putrescine in a cheese experimental model (Ladero et al., 2016; del Rio et al., 2019). Tyramine is one of the most toxic and frequent BA found at high concentrations in cheese. Q69 and 156 E. faecalis-infecting phages isolated from cheese, were characterized by determining its host range and genome sequences. The presence of any of the phages efficiently reduced the final concentration of tyramine and putrescine in an experimental cheese model. In the light of the results obtained, and given that E. faecalis is the main responsible for tyramine and putrescine accumulation in cheese, we propose the use of E. faecalis-infecting phages as effective biotechnological tools to prevent BA accumulation during the manufacture of fermented dairy foods. CONCLUSIONS Enterococcal phages as biotechnological tools towards the reduction of biogenic amines accumulation in dairy products Victor Ladero, Beatriz del Rio, Esther Sánchez-Llana, Begoña Redruello, Maria Fernandez, M. Cruz Martin, and Miguel A. Alvarez Dairy Research Institute (IPLA-CSIC), Paseo Rio Linares s/n, 33300, Villaviciosa, Spain A total of 62 screenings from different cheese types at different periods were performed. One gram of each cheese sample were homogenize in 2% sodium citrate and 100 ml added to enrichment media (GM17 supplemented with 10 mM CaNO 3 and Mg 2 SO 4 ) inoculated independently with eight different E. faecalis host strains (Figure 1). A total of 23 different phages were isolated. Among them, phage Q69 and 156 were selected for further characterization . Bacteriophage isolation from cheese samples Fig. 1. Phage screening procedure from cheese samples. Different E. faecalis strains were individually use as host in enrichment cultures. Supernantans from these cultures were tested (spot method) against several E. faecalis strains. Characterization of Q69 Q69 is a lytic phage that belongs to the Siphoviridae family (Figure 2). The phage was able to infect ten strains of dairy and human origin (Table 1), including the type strain E. faecalis CECT 481 T . Its genome is a dsDNA molecule of 42 kb that comprises 71 ORFs, which putative function was assigned based on sequence similarity (Figure 3). Fig.2. Electron photomicrographs of phage Q69. Phage particles were isolated by ultracentrifugation, negatively stained with 2% uranyl-acetate solution, and examined in a JEOL JEM 1011 transmission electron microscope. Table 1. Host range determination. 27 E. faecalis strains of different origin were challenged with phage Q69 via the spot test. Fig.3. Genomic map of phage Q69. Total DNA was sequenced using Illumina technology at GATC (Germany). Reads were assembled using SPAdes, ORFs identified by Glimmer and its function was assigned based on blast results. The main functions related with its life cycle are indicated. Phage-based biocontrol of tyramine and putrescine in a mini-cheese model To test the potential utility of phages as BA control agents in cheese, a challenge with phage Q69 and 156 in an experimental mini-cheese model (Herrero-Fresno et al., 2012) was done (Figure 6). After two months of ripening, it can be observed that Q69 caused a reduction of the accumulated tyramine (63 mg kg -1 versus 430 mg kg -1 , Figure 7) and phage 156 cause a reduction of more than 95 % os tyramine (29 mg kg -1 versus 720 mg kg -1 , Figure 8A) far below its toxic threshold limit. The tyramine in vitro LOAEL (lowest observed adverse effect level) is 302 mg kg -1 (Linares et al., 2016). Phage 156 was also able to reduce the presence of putrescine, another toxic BA, although at lower rate 77% (19.3 mg kg -1 versus 87.2 mg kg -1 , Figure 8B) . Fig. 6. Experimental procedure in the phage challenge for the reduction of BA production. E. faecalis 23a -a tyramine and putrescine -producing and phjage-sensitive strain- was inoculated (10 4 cfu ml -1 ) in six milk batches. Phage Q69 or 156 were added to three batches at MOI=0.1. Samples were taking after the curd was formed (t0) and after two moths of ripening (tf). Fig. 7. Q69 Phage biocontrol assay in the experimental mini-cheese model. Tyramine concentration (mM) measured by UPLC at (t0) and (tf). (dark gray bar: control cheeses; white bar: cheeses with phage Q69). The percentage of tyramine reduction between control and phage challenged cheeses is indicated. (*p < 0.05; Student’s t-test). 0 1 2 3 4 t0 tf Tyramine (mM) * 430 mg kg -1 63 mg kg -1 Tyramine reduction 84.8 % Herrero-Fresno, et al., 2012, Int J Food Microbiol, 157:297-304; Linares, et al.,. 2012, Front Microbiol, 3(180); Ladero, et al., 2016. Front Microbiol, 7(445). Linares, et al., 2016. Food Chem, 197:658- 663; del Rio et al., 2019. Front Microbiol, 10(566). This work was funded by the Spanish Ministry of Science (AGL2016-78708-R), CSIC (201870I091) and PCTI of the Principality of Asturias and EU Regional Development Funds (idi/2018/0 00114 ). Characterization of 156 42,241bp Terminase Lysis Structural Replication Unknown Terminase Lysis Structural Replication Unknown 141,133 bp Fig.5. Genomic map of phage 156. Total DNA was sequenced using Illumina technology at GATC (Germany). Reads were assembled using SPAdes, ORFs identified by Glimmer and its function was assigned based on blast results. The main functions related with its life cycle are indicated. Fig.4. Electron photomicrographs of phage 156. Phage particles were isolated by ultracentrifugation, negatively stained with 2% uranyl-acetate solution, and examined in a JEOL JEM 1011 transmission electron microscope. Table 2. Host range determination. 27 E. faecalis strains of different origin were challenged with phage 156 via the spot test. 156 is a lytic phage that belongs to the Myoviridae family (Figure 4). The phage was able to infect 20 strains of dairy and human origin (Table 2), including the type strain E. faecalis CECT 481 T . Its genome is a dsDNA molecule of 141 kb that comprises 209 ORFs, which putative function was assigned based on sequence similarity (Figure 5). 0 1 2 3 4 5 6 7 t0 tf Tyramine (mM) *** 720 mg kg -1 29 mg kg -1 Tyramine reduction 95.9 % 0 0,5 1 1,5 2 t0 tf Putrescine (mM) * 87.2 mg kg -1 19.3 mg kg -1 Putrescine reduction 77.8 % Fig. 8. 156 Phage biocontrol assay in the experimental mini-cheese model. (A) Tyramine concentration (mM) measured by UPLC at (t0) and (tf). (dark gray bar: control cheeses; white bar: cheeses with phage 156). (B) Putrescine concentration (mM) measured by UPLC at (t0) and (tf). (dark gray bar: control cheeses; white bar: cheeses with phage 156). The percentage of tyramine and putrescine reduction between control and phage challenged cheeses is indicated. (*p < 0.05; ***p<0,001, Student’s t-test). References and Acknowledgments

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Page 1: Enterococcal phages as biotechnological tools towards the

INTRODUCTION

RESULTS

Biogenic amines (BA) are nitrogenous compounds with important biological activities. However, due to the metabolism of certain bacteria, BA can accumulate in high concentrations in food and itsconsumption constitutes a toxicological threat. Cheese is one of the foods that higher concentrations of BA can accumulate, being some lactic acid bacteria (LAB) the main BA-producers (Linares etal., 2012). Consequently, most of the methods proposed for reducing BA in food, based on reducing the presence of BA-producing bacteria, have failed to solve the problem, and they also affect non-BA producing LAB that are essential in the development of the organoleptic characteristics of cheese. Therefore, new and more specific solutions are needed.Bacterio(phages) have arisen as a promising antimicrobial weapon both in clinical and food safety applications. They present some properties that made them ideal biotechnological tools againstfood spoilage microorganisms such as BA-producing bacteria: they are extremely host-specific, food-grade, have a long shelf life, are able to resist the environmental stresses encountered duringfood processing, and since they are self-replicating and self-limiting, low dosages can be employed.In this communication, we present the isolation and further characterization of dairy phages against Enterococcus faecalis, the species mainly responsible of the accumulation of tyramine andputrescine in cheese. Among them, we have chosen phages Q69 and 156 for an in deep characterization and to perform a proof-of-concept challenge to reduce the presence of tyramine andputrescine in a cheese experimental model (Ladero et al., 2016; del Rio et al., 2019). Tyramine is one of the most toxic and frequent BA found at high concentrations in cheese.

Q69 and 156 E. faecalis-infecting phages isolated from cheese, were characterized by determining its host range and genome sequences. The presence of any of the phages efficiently reduced thefinal concentration of tyramine and putrescine in an experimental cheese model. In the light of the results obtained, and given that E. faecalis is the main responsible for tyramine and putrescineaccumulation in cheese, we propose the use of E. faecalis-infecting phages as effective biotechnological tools to prevent BA accumulation during the manufacture of fermented dairy foods.

CONCLUSIONS

Enterococcal phages as biotechnological tools towards the reduction of biogenic amines accumulation in dairy products

Victor Ladero, Beatriz del Rio, Esther Sánchez-Llana, Begoña Redruello, Maria Fernandez, M. Cruz Martin, and Miguel A. AlvarezDairy Research Institute (IPLA-CSIC), Paseo Rio Linares s/n, 33300, Villaviciosa, Spain

A total of 62 screenings from different cheese types at different periods were performed. One gram of each cheese samplewere homogenize in 2% sodium citrate and 100 ml added to enrichment media (GM17 supplemented with 10 mM CaNO3and Mg2SO4) inoculated independently with eight different E. faecalis host strains (Figure 1). A total of 23 different phageswere isolated. Among them, phage Q69 and 156 were selected for further characterization .

Bacteriophage isolation from cheese samples

Fig. 1. Phage screening procedure from cheese samples. Different E. faecalisstrains were individually use as host in enrichment cultures. Supernantans fromthese cultures were tested (spot method) against several E. faecalis strains.

Characterization of Q69Q69 is a lytic phage that belongs to the Siphoviridae family (Figure 2). The phage was able toinfect ten strains of dairy and human origin (Table 1), including the type strain E. faecalis CECT481T. Its genome is a dsDNA molecule of 42 kb that comprises 71 ORFs, which putative functionwas assigned based on sequence similarity (Figure 3).

Fig.2. Electron photomicrographs of phage Q69.Phage particles were isolated by ultracentrifugation,negatively stained with 2% uranyl-acetate solution,and examined in a JEOL JEM 1011 transmissionelectron microscope.

Table 1. Host range determination. 27 E.faecalis strains of different origin werechallenged with phage Q69 via the spottest.

Fig.3. Genomic map of phage Q69. Total DNA was sequenced using Illumina technology at GATC(Germany). Reads were assembled using SPAdes, ORFs identified by Glimmer and its function wasassigned based on blast results. The main functions related with its life cycle are indicated.

Phage-based biocontrol of tyramine and putrescine in a mini-cheese model

To test the potential utility of phages as BA control agents in cheese, a challenge with phageQ69 and 156 in an experimental mini-cheese model (Herrero-Fresno et al., 2012) was done(Figure 6). After two months of ripening, it can be observed that Q69 caused a reduction ofthe accumulated tyramine (63 mg kg-1 versus 430 mg kg-1, Figure 7) and phage 156 cause areduction of more than 95 % os tyramine (29 mg kg-1 versus 720 mg kg-1, Figure 8A) far belowits toxic threshold limit. The tyramine in vitro LOAEL (lowest observed adverse effect level) is302 mg kg-1 (Linares et al., 2016). Phage 156 was also able to reduce the presence ofputrescine, another toxic BA, although at lower rate 77% (19.3 mg kg-1 versus 87.2 mg kg-1,Figure 8B) .

Fig. 6. Experimental procedure in the phage challenge for the reduction of BA production. E. faecalis 23a -atyramine and putrescine -producing and phjage-sensitive strain- was inoculated (104cfu ml-1) in six milkbatches. Phage Q69 or 156 were added to three batches at MOI=0.1. Samples were taking after the curdwas formed (t0) and after two moths of ripening (tf).

Fig. 7. Q69 Phage biocontrol assay in the experimental mini-cheesemodel. Tyramine concentration (mM) measured by UPLC at (t0) and (tf).(dark gray bar: control cheeses; white bar: cheeses with phage Q69).The percentage of tyramine reduction between control and phagechallenged cheeses is indicated. (*p < 0.05; Student’s t-test).

0

1

2

3

4

t0 tf

Tyra

min

e (m

M)

*

430 mg kg-1

63 mg kg-1

Tyraminereduction84.8 %

Herrero-Fresno, et al., 2012, Int J Food Microbiol, 157:297-304; Linares, et al.,. 2012, Front Microbiol, 3(180); Ladero, et al., 2016. Front Microbiol, 7(445). Linares, et al., 2016. Food Chem, 197:658-663; del Rio et al., 2019. Front Microbiol, 10(566).This work was funded by the Spanish Ministry of Science (AGL2016-78708-R), CSIC (201870I091) and PCTI of the Principality of Asturias and EU Regional Development Funds (idi/2018/0 00114 ).

Characterization of 156

42,241bpTerminase Lysis Structural Replication UnknownTerminase Lysis Structural Replication Unknown 141,133 bp

Fig.5. Genomic map of phage 156. Total DNA was sequenced using Illumina technology at GATC(Germany). Reads were assembled using SPAdes, ORFs identified by Glimmer and its function wasassigned based on blast results. The main functions related with its life cycle are indicated.

Fig.4. Electron photomicrographs of phage 156.Phage particles were isolated by ultracentrifugation,negatively stained with 2% uranyl-acetate solution,and examined in a JEOL JEM 1011 transmissionelectron microscope.

Table 2. Host range determination. 27 E.faecalis strains of different origin werechallenged with phage 156 via the spottest.

156 is a lytic phage that belongs to the Myoviridae family (Figure 4). The phage was able to infect20 strains of dairy and human origin (Table 2), including the type strain E. faecalis CECT 481T. Itsgenome is a dsDNA molecule of 141 kb that comprises 209 ORFs, which putative function wasassigned based on sequence similarity (Figure 5).

01234567

t0 tf

Tyra

min

e (m

M)

***

720 mg kg-1

29 mg kg-1

Tyraminereduction95.9 %

0

0,5

1

1,5

2

t0 tf

Putr

esci

ne (m

M)

*87.2 mg kg-1

19.3 mg kg-1

Putrescinereduction77.8 %

Fig. 8. 156 Phage biocontrol assay in the experimental mini-cheese model. (A) Tyramine concentration (mM) measured byUPLC at (t0) and (tf). (dark gray bar: control cheeses; white bar: cheeses with phage 156). (B) Putrescine concentration(mM) measured by UPLC at (t0) and (tf). (dark gray bar: control cheeses; white bar: cheeses with phage 156). Thepercentage of tyramine and putrescine reduction between control and phage challenged cheeses is indicated. (*p < 0.05;***p<0,001, Student’s t-test).

References and Acknowledgments