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Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

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Page 1: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

Everything is Missing… Data

A primer on causal inference and propensity scores Dan Chateau

Page 2: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

Population- Based Health

Registry

Social Housing

Education

Healthy Child MB

Immunization

Medical Services

Lab

Nursing Home

Clinical

ProviderVital

StatisticsER

Health Links

Home Care

Hospital

Family Services

Justice

Income Assistance

• Families First• Healthy Baby• EDI

MCHP Houses the AnonymizedPopulation Health Research Data Repository

• ICU• FASD• Pediatric

Diabetes

• K to Grade 12• Post-Secondary

(UofM)CancerCare

Census Data at

DA/EA Level

Pharmaceuticals

Page 3: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

How do we know if something worked?

Ideally we have results from both worlds…

alternate realities if you will

Page 4: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

BA

C

Page 5: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

whole world untreated

untreated

whole world

treated

treated

compare

Page 6: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

The Propensity Score--Review

• Predict the likelihood of exposure…And

• Match on that• Use Inverse Probability of Treatment Weights

Page 7: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

The Propensity Score--ReviewAssess: Did propensity score create comparable groups?

• Distribution of covariates in Group 1 comparable to distribution of covariates in Group 2?

Page 8: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

-15% -10% -5% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 55% 60%

Maternal Substance Abuse

Social assistance

Smoke during pregnancy

Single parent

Socio Economic Status: SEFI2

Screened Prenatally

Maternal Schizophrenia

Violence

Relation distress

No prenatal care

Mentally disabled Mom

Low education-Mother

Social Isolation

Family disability

Drug use

Maternal Type II Diabetes

Maternal Depression

Child abuse Mom

Maternal Anxiety

Antisocial Mom

Antisocial Dad

Alcohol Use

Maternal Age at First Birth

Page 9: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

The Propensity Score--ReviewAssess: Did propensity score create comparable groups?

• Distribution of covariates in Group 1 comparable to distribution of covariates in Group 2?

• This and tests on higher moments suggested comparable

• Assess results

Page 10: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

• Likely, there exists some unmeasured confounding.

• How much confounding is needed to nullify our findings?

Can we hang our hat on the results?

Not Significant

Impact of variableCONFOUNDER

STRENGTH OF CONFOUNDER

Page 11: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

• Likely, there exists some unmeasured confounding.

• How much confounding is needed to nullify our findings?

Can we hang our hat on the results?

Not Significant

Impact variableCONFOUNDER

STRENGTH OF CONFOUNDER

Page 12: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

• Likely, there exists some unmeasured confounding.

• How much confounding is needed to nullify our findings?

Can we hang our hat on the results?

Not Significant

Impact on LBWCONFOUNDER

STRENGTH OF CONFOUNDER

Page 13: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

• Sensitivity Test quantifies the strength of this unmeasured confounding

• How strong of a confounder will nullify findings?– If a strong confounder is needed: robust to confounding– If a weak confounder is needed: sensitive to confounding

• Strength is a function of two things:– Size of the relationship Benefit LBW– Precision of the relationship Benefit LBW

Can we hang our hat on these results?

Rosenbaum P. Observational Studies. 2nd ed. New York, NY: Springer-Verlag New York, Inc., 2010.

Guo S, Fraser MW. Propensity Score Analysis: Statistical Methods and Applications. Sage Publications, 2009.

Jiang M, Foster EM, Gibson-Davis CM. Breastfeeding and the Child Cognitive Outcomes: A Propensity Score Matching Approach. Maternal and Child Health Journal 2011;15:1296-1307.

Page 14: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau

Without Healthy Baby Benefit• Low-Income LBW rate HIGHER than High-Income LBW rate

With Healthy Baby Benefit• Low-Income LBW rate LOWER than High-Income LBW rate

Inequality with and without benefit: Significantly Different• Need confounder that accounts for 26% of this relationship• Over and above balancing achieved through propensity

score• Is it likely that such a confounder exists?

Can we hang our hat on these results?

Page 16: Everything is Missing… Data A primer on causal inference and propensity scores Dan Chateau