Be part of the next-generation multi-omics computing revolution

Genomics + Proteomics Come Together in the Cloud

SWATH™ Acquisition in the Cloud: OneOmics™ Project in BaseSpace®

– Christie Hunter, PhD and Brigitte Simons, PhD, SCIEX

U.S. HUPO 2015March 15-18 • Tempe, AZ

reference libraries

proteomicsgenomics

BaseSpace®

NEXT-GENSEQUENCINGSWATH™

NEXT-GENPROTEOMICS

SCIEX

user applications

Introducing the OneOmics™ Project with the SCIEX SWATH™ Proteomics Cloud Toolkit

SCIEX and Illumina® have partnered to create an environment where complex multi-omics data integrates easier, executes faster and more securely, and presents results immediately for worldwide collaboration.

With the OneOmics™ Project, highly-reproducible SWATH™ proteomics data output from SCIEX TripleTOF™ systems is processed remotely in Illumina’s BaseSpace® cloud computing environment. Results then integrate with information from next-gen sequencing and user-developed applications within BaseSpace® to provide unprecedented biological insights.

The benefits for proteomicscientists are significant

• Quickly and easily process and store SWATH™-generated mass spec-based proteomics big data sets

• Reduce onsite proteomics IT and related maintenance costs by processing data remotely on high-performance servers

• Share data securely and instantly, worldwide

• Present complex proteomics data in graphical representations that are easily understood by biologists for faster interpretation and greater productivity

SWATH™ Proteomics Cloud Toolkit The only cloud-based, app-enabled solution for integrated multi-omics analysis

Protein Expression ANALYTICSOffers a complete set of analytics that enable data quality analysis

Protein Expression BROWSERProvides a comprehensive set of visualization tools to present results in biological context, including graphical heat maps, starburst blots, box/whiskers and gene ontology

Protein Expression EXTRACTORProcesses SWATH™ data at least 10X faster than typical high-performance workstations – so results are now available in hours, not days

Protein Expression ASSEMBLERExecutes protein fold-change analysis and groups samples, according to biological experiments to determine fold change of protein expression

DATA UPLOADThe CloudConnect plug-in for your PC enables the uploading of SWATH™ data to BaseSpace®

Our toolkit comprises a suite of four applications and a plug-in to upload proteomics data into BaseSpace®

POSTER PRESENTATION AT U.S. HUPO

Integrating Proteomics and Genomics Data in a Cloud EnvironmentChristie Hunter, PhD, Brigitte Simons, PhD,

Randy Arnold, PhD, SCIEX

Getting started is easy

To see a video demo, visit: www.sciex.com/OneOmics

To learn more about the SWATH™ Proteomics Cloud Toolkit applications and cloud computing environment – and to test with preloaded sample data – visit: https://basespace.illumina.com

The integration of proteomic and genomic data analysis

through a partnership with SCIEX and Illumina® is an

exciting collaboration that will bring democratization of

computational efforts, general access and standardization

of data analysis, and provide a platform for systems

biology in life science.

Leroy Hood, M.D., PhD President of Institute for Systems Biology

"

"

AB SCIEX is doing business as SCIEX.© 2015 AB Sciex. For Research Use Only. Not for use in diagnostic procedures. The trademarks mentioned herein are the property of AB Sciex Pte. Ltd. or their respective owners. AB SCIEX™ is being used under license.

RUO- MKT-07- 2065 - A 2/2015

Learn moreabout the OneOmics™ Project

Take the next stepTry OneOmics™ FREE today