View
220
Download
0
Embed Size (px)
Citation preview
Host population structure and the evolution of parasites
Mike Boots
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.QuickTime™ and a
TIFF (Uncompressed) decompressorare needed to see this picture.
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture.
MALARIA
OurInfectious Diseases
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
QuickTime™ and aTIFF (Uncompressed) decompressor
are needed to see this picture.
Theory on the evolution of parasites
Evolutionary game theory‘Adaptive Dynamics’
Can strains invade when rare?Generally a simple haploid genetic assumptionSmall mutationsEcological feedbacks
Theory on the evolution of parasites
Infectivity is maximisedInfectious period maximised
Mortality due to infection (virulence) minimisedRecovery rate minimised
Trade-offs related to exploitation of the host explain variation
Virulence as a cost to transmission
Transmission
Virulence
S I S S
S
I S I
Lattice Models (Spatial structure within populations)
S
Transmission
Reproduction
S
Natural Mortality
I
NaturalMortality + Virulence
200 400 600 800 1000
5
10
15
20
25
30
35
t
MeanTransmission
TIME
No trade-offs between transmission and virulence
Simulation results for the evolution of transmissionwith individuals on a lattice where interactions are all local
Max transmission = 150
Intermediate Levels of Spatial Structure
I
SI
SGlobal Infection (L)
(1-L)Local Infection
Mean Virulence
1.00.80.60.40.20.00
1
2
3
4
5
L (Proportion of global infection)
Maximum virulence
Lineartrade-offwith virulenceand transmission
Host Parasite models between local and mean-field
Pair-wise Approximation: differential equations for pair densities
PSI(t) =prob randomly chosen pair is in state SI
z
(z 1)PSIqI /SI
conditional prob thatI is a neighbour of an Ssite in an SI pair
event
z
PSI =
transmission rate
# neighbours(fixed)
r(SI II )
eg,
Host Parasite models between local and mean-field
Pair-wise Approximation: differential equations for pair densities
eg, PSI(t) =prob randomly chosen pair is in state SI
z
(z 1)PSIqI /SI
event
z
PSI
=r(SI II )
Host Parasite models between local and mean-field
Pair-wise Approximation: differential equations for pair densities
eg, PSI(t) =prob randomly chosen pair is in state SI
z
(z 1)PSIqI /SI
event
z
PSI
=r(SI II ) 1 LI LIPSI PI
LI=0 (local), LI=1 (mean-field) proportionof global infection
(1-LI)
LI
prob that a site is infected
• Derive correlation Eqns:
dPSI
dt r(SI )
events , for each pair and singleton from
states S, I, R and 0 (empty sites).
• Pair closure: determine qI/SI in terms of qI/S (from Monte Carlo sims).
• Analysis: Stability analysis (long term behaviours)Bifurcation analysis, continuation (limit cycles)
Host Parasite models between local and mean-field
with params 0<LI,Lr<1 for global proportions of reproduction forpathogen and host.
Invasion Condition
(J | I ) 1
J
dJ
dtJ {L̂S (1 L)q̂0
S / J } ( J d) > 0
J is a mutant strainI is the resident strainHat notation denotes quasi steady state
Transmission Virulence Background Mortality
Global density of susceptibles
Local density of infecteds
Pairwise Invasion Plots (Linear trade-off between transmission and virulence)
Does the analysis agree with the simulations?
Yes: There is an ES virulence with spatial structure and maximization with global infection
Yes: The ES virulence increases as the proportion of global infection increases
But: The ESS is lost before L=1.0 Weak selection gradients mean this is not
seen when simulation is run for a set time period
The ESS is lost
Bistability
Bistability
The role of trade-off shape
Transmission
Virulence
Standardassumptionof the evolution of virulence theory
Evolution with a saturating trade-off in a spatial model
Approximation
Simulation
The role of recovery: The Spatial Susceptible Infected Removed (SIR) Model
S I S R
S
I R I
S
The role of recoveryNo recovery=0
The role of recovery=0.1
Increased ES virulenceWider region of bistability
The role of recovery=0.2
Bi-stability region reduces
The role of recovery=0.3
The role of recovery=0.4
The role of recovery
Recovery rate
Max ES virulence increases
Conclusions Spatial structure crucial to evolutionary outcomes
Bi-stability leading to the possibility of dramatic shifts in virulence
Shapes of trade-offs are important
Approximate analysis is useful in spatial evolutionary models
Collaborators
Akira Sasaki (Kyushu University)
Masashi Kamo (Kyushu: Institute for risk management, Tsukuba)
Steve Webb