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IM M UNO LO G Y Bios 328 a textbook-based study ofim munology Spring 2003 http://w w w.lehigh.edu/~sk08/C ourses/Bios328/m ainpage.htm

Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

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Page 1: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

IMMUNOLOGY

Bios 328a textbook-based study of immunologySpring 2003

http://www.lehigh.edu/~sk08/Courses/Bios328/mainpage.htm

Page 2: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Immunoglobulins.

Page 3: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Immunoglobulins.

-globulins

not globins

Page 4: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Immunoglobulins.

-globulins: any of a class of simple proteins that are insoluble in pure water but are soluble in dilute salt solutions…

not globins: a colorless protein derived by removal of a heme from a conjugated protein

Page 5: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

ABSTRACT antibody

Page 6: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Early history…

Page 7: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

The molecule:

Page 8: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

The molecule:

Page 9: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put proteins in space…

Page 10: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

Page 11: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in two dimensions

Page 12: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

Page 13: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

Ribbon model…

Page 14: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

Space filling model…

Page 15: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

Domain model…

Page 16: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Amino acid composition of CDR’s

Page 17: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Put immunoglobulins in space

A bread and butter sandwich held together with a toothpick

Page 18: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Wu-Kabat plot:

Page 19: Immunoglobulins. -globulins not globins Immunoglobulins. -globulins: any of a class of simple proteins that are insoluble in pure water but are soluble

Wu-Kabat plot:

Examples:The lowest ratio:

Wu-Kabat index = 1 = 1/1

The highest ratio:

Wu-Kabat index = 400 = 20/0.05

A characteristic ratio for a CDR:

Wu-Kabat index = 50 = 10/0.2

= 80 = 12/0.15