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Make a group and Make a mouse model!

Make a group and Make a mouse model! - KAISTbs.kaist.ac.kr/~brain/Lecture/2010Spring/case studies-2... · 2010. 5. 7. · BMP7 knockout Searching the gene From spontaneous mutants

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  • Make a group and Make a mouse model!

  • Mouse model of drowsiness

  • Mouse model of alcohol intoxication

  • Different Anxiety level in inbred mice

  • Different level of Playfulness

  • C57BL/6J BALB/C

  • Mouse model of Playfulness

  • +/+ -/-

  • Mouse genetic approaches to behavior

  • Reverse Genetics & Forward Genetics

    BMP7 knockout

    Searching the geneFrom spontaneousmutants

  • Coisogenic & congenic

    Coisogenic–If a mutation is induced in inbred mice–The new line is called by coisogenic

    Congenic–Changing genetic background–e.g mice A with allele X (some phenotype) are crossed with inbred mice B–Among F1 mice obtained from A x B cross, mice with X allele crossed again with inbred B–By repeating this procedure, you can get congenic mice with X allele on genetic background of B

  • Nomenclature of inbred mice

    C57BL/6J

    C: Cold Spring Harbor laboratory 57: 57th femaleBL: black/6: 6th generationJ: Jackson laboratory

  • Nomenclature of Mutant Mice

    C57BL/6J-a1atot

    •C57BL/6J genetic background•a1a: alpha-1A calcium channel gene•Tot: tottering phenotype

    129/sv-a1anull

    •129/svgenetic background•a1a: alpha-1A calcium channel gene•Null: null mutation, Knockout

  • How to name a mutant allele

    •Names based on primary features if the gene product of wild type allele

    •Albino, himalayan, chinchilla (Tyrc, Tyrc-h, Tyrc-ch)

    •Rules for deciding new gene names are made by a nomenclature committee (http://www.informatics.jax.org/mgihome/nomen/index.shtml)

    •Many journals require that new allele names be approved by the nomenclature committee before publication

    http://www.informatics.jax.org/mgihome/nomen/index.shtml

  • Laboratory Code

    •J-The Jackson

    •Mit-Laboratory Massachusetts Institute of Technology

    •Leh-Hans Lehrach

    •Kyo-Kyoto University

    •Ztm-Central Animal Laboratory Medical School Hannover

    •Unc-University of Northern California

  • How to name a gene

    •Glra1:glycinereceptor, alpha 1

    •Hk1-rs1 (ps1) :hexokinase-1 related sequence 1 (peudogene)

    •KitW-v : Kitoncogeneallele name: viable dominant spotting

    •Slc14a2_v1:solute carrier family 14, member 2, variant1

    •Slc14a2_pr1 :solute carrier family 14, member 2, promoter1

    •D8Mit17: the 17th locus mapped to mouse Chromosome 8 by M.I.T.

    •Gt(ROSA)26Sor: the 26th gene "trapped" by the ROSA vector in the laboratory of Phillip Soriano (Sor)

    •Ntn1Gt(pGT1.8TM)629Ska: the netrin1 (Ntn1) gene gene-trap allele

  • How to name transgene or targeted allele

    Tg(CD8)1JwgA transgene containing the human CD8 gene, the first transgenic line using this construct described by the lab of Jon W. Gordon.

    Car12Tn(sb-T2/GT2/tTA)1.1DlaGene Tn(transposon_class_abbreviation-vector)#Labcode

    Cftrtm1UncThe first targeted mutation(tm) of the cystic fibrosis transmembraneregulator (Cftr) gene produced at the University of North Carolina.

  • Explain following words each other

    •Co-isogenicmice

    •Congenicmice

    •Outbredmice

    •F1 mice

    •Inbred mice

  • The most efficient way for robust outputs in behavioral studies

  • ES Cells into

    Blastocysts

    Strain with recessive coat color

    neo

    neo

    ES Cell

    Transfection

    of targeting

    vector

    Germ-line

    Germ-line

    F1

    Chimera

    Embryo

    Transfer

    to Uterus

    Foster

    F2

  • X X

    X

    Cosiogenic B6(N1)

    B6(N6~20)

    X

    -/- +/+

    F1 wild & mutant

    Chimera129 B6

    B6 Congenic

  • X

    F1 X

    +/+ -/-

    F2

    Chimera