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MarvinSketch User's Guide https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM] Spaces Log in Pages / Documentation / MarvinSketch MarvinSketch User's Guide Getting started Start to draw Select Delete Move / Rotate / Zoom/ Scale Tricks and Tips MarvinSketch Graphical User interface Canvas Menus of MarvinSketc h Toolbars of MarvinSketc h Pop-up Menus of Working in MarvinSketch Structure Display Options Custo mizing structu re drawin g styles D r a w i n g s e t t i Marvin OLE User's Guide Install and Uninstall How to Use Customize Marvin OLE editing mode Redirecting other Vendors' OLE objects to Marvin OLE Logging Troubleshooti ng and Administratio n Known Issues Appendix Documentation PAGE TREE By using sites on our domain (*.chemaxon.com), you agree to our use of cookies to enhance your experience. See our Privacy Policy. GOT IT

MarvinSketch User's Guide

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Page 1: MarvinSketch User's Guide

MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Spaces Log in

Pages / Documentation / MarvinSketch

MarvinSketch User's Guide

Getting started

Start to drawSelectDeleteMove / Rotate / Zoom/ ScaleTricks and Tips

MarvinSketch Graphical User interface

CanvasMenus of MarvinSketchToolbars of MarvinSketchPop-up Menus of MarvinSketch

Working in MarvinSketch

Structure Display Options

Customizing structure drawing styles

Drawing setting

Marvin OLE User's Guide

Install and UninstallHow to UseCustomize Marvin OLE editing modeRedirecting other Vendors' OLE objects to Marvin OLELoggingTroubleshooting and AdministrationKnown Issues

Appendix

Table of abbreviated

Documentation

PAGE TREE

Space toolsBy using sites on our domain (*.chemaxon.com), you agree to our use of cookies to enhance your experience. See our Privacy Policy.

GOT IT

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MarvinSketch User's Guide

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Status bar of MarvinSketchDialogs of MarvinSketchShortcuts of MarvinSketchCustomizing MarvinSketch GUIConfigurations of MarvinSketchServices module

Chemical Features in MarvinSketch

Valence CheckStructure CheckerCharges, Isotopes, Radicals

ChargesIsotopes in MarvinSketchRadicals

StereochemistryReaction schemesAbbreviated groups (Superatom

s

Drawing styles

Structure DisplayColorsImplicit/Explicit HydrogensDisplaying the label of carbon atomsError Highlighting in MarvinSketchSaving Display Options

Basic EditingSelecting a Struct

groupsTrademarks

Tutorials

Drawing “AURORA” in less than 20 seconds using MarvinSketch 6.1 from ChemAxonIntroduction to ChemAxon’s Drawing Tool: MarvinSketch 6.0Atom Label Editor

Did you know ... series

Part 1 : R/S isomersPart 2 : Abbreviated GroupsPart 3 : Peptide drawing I.Part 4 : Peptide drawing II.Part 5: Reactions

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MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

group)Query Features

R-groupsLink NodesAtom List and NOT ListAtom PropertiesGeneric Query AtomHomology group

Attached DataCalculations

Analysis boxCalculations Plugins

ureCopy-Paste and Drag&DropGeometric transformation of structures and objects

Moving&Rotating

Scaling

Flip a

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MarvinSketch User's Guide

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molecule

Mirror a molecule

Central inversion of

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MarvinSketch User's Guide

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a molecule

CleaningDeleting a StructureEditing the source

Import and export options

Open a molecule fileSaving a molecule fileExport to image

Multipage documents

How to create a multipage documentHow to navigate in multipage documents

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MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Printing in MarvinSketchDrawing Simple Structures

How to Draw AtomsHow to Draw BondsHow to Draw ChainsSpoutingMerging StructuresTemplatesDrawing stereocentersCoordination compoundsInsert/Edit new structure (fragment)Atom Label Editor

Drawing More Complex Structures

Substructure

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MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Groups

Abbreviated (superatom) groups

Polymers

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MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Page 9: MarvinSketch User's Guide

MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Page 10: MarvinSketch User's Guide

MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

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MarvinSketch User's Guide

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MarvinSketch User's Guide

https://docs.chemaxon.com/display/docs/MarvinSketch+User's+Guide[12/23/2015 8:24:55 AM]

Unordered Mixtures and Order

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MarvinSketch User's Guide

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ed Mixtures

Charge of the group

R-groupDraw link nodesHomology GroupsAtom lists and NOT listsPosition variati

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MarvinSketch User's Guide

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onMarkush structuresQuery structuresBiomoleculesAtom, bond and molecule properties

Drawing reactions

Create ReactionsMapping ReactionsElectron flow arrows

Graphical objects

How to add, edit and format textHow to draw shapesGraphical object properties

C