SCT1

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SCT 1Integrative biology of organisms, mechanisms of interactions and

stress responses

units organization

scientists and their competences

Ph.D and their fundings

reception of trainee-researchers

scientifics projects supported by the department

incentive programs

partnership

bibliometrics

Assistant head of Dpt : Thierry CANDRESSE

SCT1

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SCT 1 : units organization in 2002

genomicsplatform

Versailles GrignonRennes

Angers

ColmarDijon

Poitou Charentes Clermont Lyon

Avignon

Antibes

Montpellier

Antilles

Toulouse

scale :

30 INRA and associated scientists

SCT 2

SCT 3

SCT 4

SCT 1

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SCT 1 scientists (researchers & ingeniors) in ETP

32 % of

total SPE

SCT 1 :

116,1 ETP

INRA permanent scientists in

2002 : 362 ETP

except scientists outside SPE SCTs and outside SPE departmentETP = full time equivalent

100 scientists

29 % of

SPE total

SCT 1 :

112,1 ETP

INRA permanent scientists in

1998 : 390,3 ETP

70 % of

total SPE

SCT 1 :

50,8 ETP

permanent associated scientists in

1998 : 72,8 ETP

65 % of

total SPE

SCT 1 :

74,0 ETP

permanent associated scientists in

2002 : 113,8 ETP

74

50,8

116,1

112,1

-150 -100 -50 0 50 100

1998

2002

associated scientists (ETP)

INRA scientists (ETP)

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SCT 1 stock and flow of scientists and academics

  DR PR/PUPH CR MC IR IE total

INRA 1998 32   54   11 18 115

INRA 2002 37 55 12 15 119

             

others 1998 11 7 18 9   8 53

others 2002 12 12 16 36 1 6 83

-12-9-6-30369

1998 1999 2000 2001 2002

incomes outcomes

flow

-15

-10

-5

0

5

10

15

20

25

1998 1999 2000 2001 2002

incoming outgoing flowstock

in 2002

flow / stock

78 42 36 198 18 %

SCT1

INRA incoming 28

INRA outgoing 24

others incoming 50

other outgoing 18

INRA flow 4

others flow 32

total flow 36

stocks in 1998 and 2002flow from 1998 to 2002

consolidated flow 1998 - 2002 SCT1 INRA and others flow

SCT1 INRA flow

included incoming of new scientists by promotion (AI -> IE)

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demographic repartition of INRA SCT 1 scientists

0

5

10

15

20

25

30

<30 30-34 35-39 40-44 45-49 50-54 55-59 >60

ingeniors

researchers

average age 44,4

2002

average age 43,4

0

5

10

15

20

25

30

<30 30-34 35-39 40-44 45-49 50-54 55-59 >60

1998

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estimated number of retiring scientists in 2003 - 2007

0

5

10

15

20

25

2003 2004 2005 2006 2007

0

5

10

15

20

25

total

SCT 1

2003 2004 2005 2006 2007 totalstock 2002

outgoing/ stock

SCT 1 0 1 2 2 3 8 119 7 %

total 2 12 12 25 19 70 364 19 %

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the competencesof scientists recruited from 1998 to 2000

year unit level thematics competence NAME

1998

Antibes 1064 CR2 determinants of pathogenicity molecular basis of pathogenicity in the oomycete Phytophthora V. COLAS

Colmar 1130 CR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors

molecular interactions between luteovirus and specific receptors in Aphids P. SEDDAS

Montpellier 1063 DR2  rhizobial symbiosis  (mutation from EA department)J.C. CLEYET

MAREL

Rennes 1099 CR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors

molecular mechanisms of Aphid transmission and luterovirus evolution E. JACQUOT

1999

Antibes 1064 CR2 plant defence mechanisms identification of genes involved in plants response to nematodes B. FAVERY

Antibes 1064 CR1 plant defence mechanismsIdentification of induced genes in plants response to compatible

oomycetes H. KELLER

Clermont 203 CR2 genomics of bioagressors molecular targets of entomoxic peptides F. GRESSENT

Versailles 256 CR2 genomics of bioagressors Physiology et molecular genetics of phytopathogenic fungi M. VIAUD

  IBP CR2 determinants of pathogenicitymolecular analysis of infection processus in hemibiotrophic

phytopathogen fungus R. LAUGE

Toulouse 441 DR2 rhizobial symbiosismolecular mechanisms of plant-microorganisms symbiotic

interactions in the rhizosphere. F.J. DE BRUIJN

2000

Antibes 1064 DR1 insect genomics and physiologyfonctionnal genomics and physiology of agronomically important

insects R. FEYEREISEN

Montpellier 1133 CR2 Symbiots and pathogens of insects fonctionnal genomics of bacteria pathogenic to insects S. GAUDRIAULT

Montpellier 385 CR2 plant defence mechanisms genomic approach of plant defence mechanisms J.B. MOREL

SCT1

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of scientists recruited from 2001 - 2002

année unitécorp

sTHEMATIQUE PROFIL NOM

2001

Antibes 1112 IR2 insect genomics and physiologymanagment of a functional genomics platform for the development of lepidopterans genomics F. HILLIOU

GMPV 71 CR2 determinants of pathogenicity virulence of bacteria pathogenic to insects P. NEL

Montpellier 1231 CR1 insect genomics and physiology structure and functioning of the lepidopteran genome E. D'ALENCON

Rennes 1099 DR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors

molecular and evolutive genetics of aphids D. TAGU

Toulouse 441 CR2 plant defence mechanisms molecular genetics of plant defence mechanisms T. KROJ

Toulouse 441 CR1 determinants of pathogenicity genetic analysis of the infection potential of rhizobium C. BRUAND

2002

Antibes 1112 IR2development of resources and approaches for high-throughput biology

bioinformatics for a functionnal genomics platform E. DELEURY

Montpellier 27 CR1molecular mechanisms involved in the vector-mediated transmission of bioaggressors

mechanisms and regulation of vector-mediated transmission of

viruses M. DRUCKER

Toulouse 441 CR2 determinants of pathogenicity functional genomics of bacteria pathogenic to plants N. PEETERS

Toulouse 441 IE2development of resources and approaches for high-throughput biology

bioinformatics for a genomic platform S. CARRERE

Toulouse 441 IR2development of resources and approaches for high-throughput biology

management of an integrated bioinformatic environnment for plants genomics J. GOUZY

temporary recruitment

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Ph.Ds and supporting organizations

0

5

10

15

20

25

1994 1995 1996 1997 1998 1999 2000 2001 2002

foreign organisations

universities

agronomical universities

other schools

  1994 1995 1996 1997 1998 1999 2000 2001 2002 SCT 1 total SPE total% of SPE

total

foreign organizations 1 2         1 1   5 13 38%

Universities 11 10 16 5 12 16 18 12 19 119 228 52%

agronomical Universities   1 1 5 3 4 3   1 18 55 33%

other engeneering schools     3 1 2   2 1 2 11 13 85%

SCT 1 total 12 13 20 11 17 20 24 14 22 153 309 50%

SPE total 18 26 45 39 33 35 45 29 39 309    

% of SPE total 67% 50% 44% 28% 52% 57% 53% 48% 56% 50%    

3%

78%

12%

7%

SCT1 Ph.Ds list

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PhDs and their registering Universities

Paris areaRennes

Angers

Dijon

Bordeaux

Clermont Lyon

Montpellier

Antilles

Toulouse

foreign organizations

Tours

Marseille

Nancy

Strasbourg

Nice

scale : 20 Ph.Ds

SCT 1other SCT

Organization  SCT 1 SPE total % of SPE

total

Univ Toulouse 3 35 38 92%

Univ Bourgogne 22 32 69%

Univ Bordeaux 2 10 19 53%

Univ Montpellier 2 11 18 61%

Univ Paris 6 6 18 33%

INA-PG 6 18 33%

ENSAM 6 17 35%

Univ Nice 3 16 19%

ENSAR 3 16 19%

Univ Rennes 1 3 14 21%

Univ Lyon 1 3 10 30%

Univ Paris 11 5 9 56%

Univ Angers 2 7 29%

INSA Lyon 7 7 100%

Univ Aix-marseille 3 1 5 20%

Univ Tours 2 5 40%

Univ Aix-marseille 2 2 4 50%

Univ Clermont-ferrand 2 4 50%

Univ Paris 13 3 4 75%

other agronomical schools 3 4 75%

other engeneering schools 4 6 67%

other Universities 8 20 40%

foreign organisations 5 13 38%

Grenoble

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SCT 1 SPE total % of SPE total

INRA co-funded fellowships 32 62 52%

ASC et AERC 2 7 29%

ministerial or engineering schools fellowships 65 99 66%

engineer fellowships 5 5 100%

fellowship for foreign students 25 51 49%

employees 2 6 33%

industrial fellowships 4 15 27%

sponsorized by partnership 18 64 28%

total 153 309 50%

0

20

40

60

80

100

INRA co-funded

fellowships

ASC et AERC ministerial orengineering

schoolsfellowships

engineerfellowships

fellowship forforeign

students

employees industrialfellowships

sponsorized by

partenership

0

20

40

60

80

100

total SPE SCT 1

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Ph.D fellowship supporting partners

0%

33%

19%7%

7%

24%

10% public researchinstitution

local administration

industry

agriculturaldevelopment

technical institutes

inbternational

european community

SCT1SPE total

% of SPE total

public research institution   9 0%

local administration 20 44 45%

industry 11 33 33%

agricultural development 4 12 33%

technical institutes 4 13 31%

international 14 29 48%

european community 6 13 46%

total 59 153 39%

SCT 1 fellowships partners

0

10

20

30

40

50

public researchinstitution

local administration industry agriculturaldevelopment

technical institutes international european community

0

10

20

30

40

50

SPE total SCT 1

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areaINRA SPE supporting

other supports

SCT 1 total

% of SCT 1

SPE total % of SPE total

Africa   19 19 1% 61 31%

North Amarica 13   13 1% 78 17%

South America 26 54 80 6% 96 83%

Asia oceania 81 61 142 10% 267 53%

Europe (except France) 184 261 445 31% 498 89%

France 469 469 33% 587 80%

Mediterranean countries 123 57 180 13% 311 58%

PECO/NEI 49 32 81 6% 105 77%

SCT 1 total 475 953 1 428 2 001 71%

% of total 33 % 67 %

Europe (France included) 184 730 914 64% 1085 84%

0

100

200

300

400

500

600

Africa north America southAmerique

Asia oceania Europe(exceptFrance)

France Mediterraneancountries

Russian area

0

100

200

300

400

500

600

all SCT SCT 1 INRA SCT 1 others

months number

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scientific projects supported by SPE

SCT 1

SPE total

% of SPE total

supported projects 66 137 48 %

non supported projects

104 245 42 %

SPE total 170 382 45 %

0

100

200

300

400

500

600

700

800

900

1998 1999 2000 2001 2002

K€

0

100

200

300

400

500

600

700

800

900

SPE total SCT1

projects selection projects funding (K€)

beginning year

  1998 1999 2000 2001 2002 total

SCT1 577 511 431 521 137 2 177

SPE total 852 1 371 748 868 221 4 060

% of SPE total 68% 37% 58% 60% 62% 54%

SCT1 projects list

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SCT 1 supported transversal projects

begining yearteam

projectsunit projects

inter departement

projects

inter organization

projectstotal 

1998 8 5 1   14

1999 19 2 1 22

2000 4 2 5 1 12

2001 1 1 2 13 17

2002   1 1

Total 32 10 8 16 66

0

5

10

15

20

25

30

35

team department INRA outer

2002

2001

2000

1999

1998

projects number

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funding of incentive programs (K€)

SCT 1SPE

Total % of SPE

total

1998 57 263 22%

1999 64 268 24%

2000 5 141 3%

2001 512 735 70%

2002 611 800 76%

Total 1 249 2 207 57%

name of the programfunding

K€

non alimentary valorisation of agricultural products 61

GDR Arabidopsis 22

Genomes and functions 26

Fundamental microbiology 64

Rhizobium meliloti 9

INRA CIRAD collaboration 26

Genetic resources organization (BRG) 53

structuring action "Quality of tomato 43

Medicago truncatula 153

Plant species sequencing projects 274

Other sequencing projects 459

Mycotoxins of cereals and forage plant 27

Biological resources center (CRB) 19

AGROPOLIS 12

 SCT 1 total 1 2490

100

200

300

400

500

600

700

800

900

1998 1999 2000 2001 2002

K€

0

100

200

300

400

500

600

700

800

900

total SPE SCT1

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financial resources from research contracts (K€)

  1998 1999 2000 2001 2002 totalaverage /

ETP

SCT1 860 949 1 671 1 804 2 134 7 418 64,8

SCT total 2 985 3 399 3 909 4 670 4 743 19 706 56,11

% of SCT total 29% 28% 43% 39% 45% 38%

0,0

0,5

1,0

1,5

2,0

2,5

3,0

3,5

4,0

4,5

5,0

5,5

1998 1999 2000 2001 2002

M €

0

0,5

1

1,5

2

2,5

3

3,5

4

4,5

5

5,5

SPE total SCT1 except equipments and provisions of serviceETP : Full Time Equivalent

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funding of research contracts and their origins (K€)

34%

32%

18%

4%

12%

international &europe

ministries andpublic researchinstitutionlocaladministration

agriculturalsector

industry

 international

& europe

ministries and public research

institution

local administration

agricultural sector

industry

public funding

private funding

total

SCT1 2 507 2 379 1 356 282 891 6 242 1 173 7 415

SCT total 6 656 5 344 2 876 2 998 1 834 14 876 4 83219

708

% of SCT total 38% 45% 47% 9% 49% 42% 24% 38%

0

1

1

2

2

3

3

4

4

5

5

6

6

7

inte

rna

tio

na

l &e

uro

pe

min

istr

ies

an

dp

ub

licre

se

arc

hin

sti

tuti

on

loc

al

ad

min

istr

ati

on

ag

ric

ult

ura

ls

ec

tor

ind

us

try

M €

0

1

1

2

2

3

3

4

4

5

5

6

6

7

SPE total SCT116% of SCT 1 research contracts resources arise from the private sector

84% of SCT 1 research contracts resources arise from the public sector

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SCT 1 publications : general data

  SCT 1SPE total

% of SPE total

A rank journal number 208 430 48 %

publications in A rank journal 659 1 850 36 %

scientists (INRA and non INRA SPE 2002) ETP  190,1  454,4 42 %

ratio publications /scientists ETP/year 0,69 0,82

     

B rank journal number 16 150 11 %

publications in B rank journal 29 621 5 %

     

A + B journals 224 580 39 %

publications in A + B journals 688 2 471 28 %

scientists (INRA and non INRA SPE 2002) ETP  190,1  454,4 42 %

ratio publications /scientists ETP/year 0,72 1,090

500

1 000

1 500

2 000

A journal B journal

0

500

1000

1500

2000

SPE total SCT1

number of publications

A-rank journals are peer reviewed scientific journaB-rank journals are non reviewed plus vulgarisation journals

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SCT 1 « A-rank » publications and their « Impact Factor » (IF)

Impact Factor

SCT 1SPE total

% of SPE total

> 5 124 150 83 %

3 à 5 160 273 59 %

2 à 3 90 323 29 %

1 à 2 162 506 27%

< à 1 109 557 32 %

NC 14 41 34 %

total 659 1 850 0

100

200

300

400

500

600

> 5 3 à 5 2 à 3 1 à 2 < à 1 NC

0

100

200

300

400

500

600

SPE total SCT 1

number of publications

among a list of 29 journals with IF ≥ 1, where 50% of SPE publications are found :

SCT 1total SPE

% of SPE total

journals number 26 29 90 %

number of publications in these journals 259 707 37 %

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type «A » multi SCT publications

  1 2 3 4

1 65

932 36 11

multi SCT publications involving SCT 1 73

SCT 1 publications 659

SCT 1 publications total 732

% multi SCT / total SCT publications 10 %

occurrences of multi SCT publications

co-publications of different SCT authors

SCT of author

1 2 3 4 totalSCT total

publicationsco-publications

%

SCT 1 publications   38 23 11 72 659 11%

co-publications with SCT 1 % 53 % 32 % 15 % 100 %

all SCT co-publications total 85 69 67 60 281 1 850 15%

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type « A » publications authors

  SCT 1 total SPE

A rank publications 659 1850

authors range number 1 to 28 1 to 28

all authors average number 5,1 4,9

one author (SPE) publications 17 59

intra SPE publications(all authors belonging SPE)

103 237

intra SPE publications % 16% 13%

SPE authors average number 2,27 2

average ratio SPE authors / all authors 45% 41%

SCT1

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the end

SCT 1Integrative biology of organisms, mechanisms of interactions

and stress responses

Assistant head of Dpt : Thierry CANDRESSE