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Building on VIVO and going the next step: Adding or Linking to Local and National repositories and/or research data; research resources and core facilities; clinical data; the CTSAconnect and Datastar projects Mike Conlon John Corson-Rikert Paul Albert

Mike Conlon John Corson- Rikert Paul Albert

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Building on VIVO and going the next step: Adding or Linking to Local and National repositories and/or research data; research resources and core facilities; clinical data; the CTSAconnect and Datastar projects. Mike Conlon John Corson- Rikert Paul Albert. Linked Open Data. Cross Linking. - PowerPoint PPT Presentation

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Page 1: Mike Conlon John Corson- Rikert Paul Albert

Building on VIVO and going the next step: Adding or Linking to Local and National repositories and/or

research data; research resources and core facilities; clinical data; the CTSAconnect and Datastar projects

Mike ConlonJohn Corson-Rikert

Paul Albert

Page 2: Mike Conlon John Corson- Rikert Paul Albert

Linked Open Data

Page 3: Mike Conlon John Corson- Rikert Paul Albert

Cross Linking

Page 4: Mike Conlon John Corson- Rikert Paul Albert

Expert Finding

Page 5: Mike Conlon John Corson- Rikert Paul Albert

Open Social

Page 6: Mike Conlon John Corson- Rikert Paul Albert

What’s next for VIVO Data?

Page 7: Mike Conlon John Corson- Rikert Paul Albert

CTSAConnect

• Align existing research resource ontology (eagle-i) and existing scholarship ontology (VIVO) into a single Integrated Semantic Framework

• Create profile elements representing physician practice based on clinical practice data

• OHSU, Cornell, Florida, Harvard, Stony Brook, Kaiser Permanente

Page 8: Mike Conlon John Corson- Rikert Paul Albert

DataStar

Page 9: Mike Conlon John Corson- Rikert Paul Albert

What’s Next for VIVO Tools?

• Search, Searchlight• Visualizations• Reporting• Cross-linking• Validations• Recommenders• iPad Application?

Page 10: Mike Conlon John Corson- Rikert Paul Albert

Building on VIVO

Internal Tools• Map of Science• Access Control• Co-author network• Co-funding network• Cross-links to courses,

papers, grants, concepts

External Tools• Open Social Gadgets• Recommender Systems• Reporting• Visualizations• Biosketches• Harvesters

Page 11: Mike Conlon John Corson- Rikert Paul Albert

sameAs

• The semantic web “sameAs” predicate declares two URIs refer to the same entity

• A sameAs B, means triples that refer to A are triples about B and vice versa.

• Person15 wrote PaperX. Person18 wrote PaperY. Person15 sameAs Person18. Therefore Person15 wrote PaperX and PaperY.

• VIVO v1. supports sameAs

Page 12: Mike Conlon John Corson- Rikert Paul Albert

Linking Across VIVOs

• Person at School X sameAs Person at School Y• Paper at School X sameAs Paper at School Y• Person at School X works on Concept in

Controlled Vocabulary at Site Y• Person at School X works at Location

described at Site Y

Page 13: Mike Conlon John Corson- Rikert Paul Albert

A Consumption ScenarioFind all faculty members whose genetic work is implicated in breast cancer

VIVO will store information about faculty and associate to genes. Diseaseome associates genes to diseases. Query resolves across VIVO and data sources it links to.

Page 14: Mike Conlon John Corson- Rikert Paul Albert

2012 VIVO ConferenceAugust 22-24, 2012 ~ Miami, FLRegister at vivoweb.org/conference

VIVO is supported by NIH Award U24 RR029822