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Nematode Extraction Methods: Root Extraction Techniques Kavitha Govindasamy Jimmy R.Rich Maria L .Mendes

Nematode Extraction Methods: Root Extraction Techniques

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Nematode Extraction Methods: Root Extraction Techniques. Kavitha Govindasamy Jimmy R.Rich Maria L .Mendes. A Plant-Parasitic Nematode. Sampling for Nematodes. Sampling and extracting for nematodes serves two purposes: Diagnosis a current problem Predict a future problem. - PowerPoint PPT Presentation

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Page 1: Nematode Extraction Methods: Root Extraction Techniques

Nematode Extraction Methods:Root Extraction Techniques

Kavitha GovindasamyJimmy R.RichMaria L .Mendes

Page 2: Nematode Extraction Methods: Root Extraction Techniques

A Plant-Parasitic Nematode

Page 3: Nematode Extraction Methods: Root Extraction Techniques

Sampling for Nematodes

Sampling and extracting for nematodes serves two purposes:

Diagnosis a current problem Predict a future problem

Page 4: Nematode Extraction Methods: Root Extraction Techniques

Objectives of sampling and extracting nematodes

Identify the nematode Population estimation Diagnose a nematode disease Make management decisions Regulatory purposes Research and surveys

Page 5: Nematode Extraction Methods: Root Extraction Techniques

Some Common Nematode Extraction Methods

Root Samples Jar incubation and sieving Blending and sieving Soil samples Baermann funnel Modified Baermann funnel Foliar samples Punching and incubating Scissors technique

Page 6: Nematode Extraction Methods: Root Extraction Techniques

Root Extraction Techniques:Jar Method

Principle

Nematodes are extracted based on their active migration from roots

Page 7: Nematode Extraction Methods: Root Extraction Techniques

Materials required

Glass jars and caps 325 or finer mesh sieve Labels and rubber bands Dark chamber

Page 8: Nematode Extraction Methods: Root Extraction Techniques

Sample ready for processing

Page 9: Nematode Extraction Methods: Root Extraction Techniques

Wash the roots

Page 10: Nematode Extraction Methods: Root Extraction Techniques

Damp dry the roots

Page 11: Nematode Extraction Methods: Root Extraction Techniques

Weigh the damp-dried roots

Page 12: Nematode Extraction Methods: Root Extraction Techniques

Place roots in jars, add water

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Place jars in tray

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Store in the dark for 72 hours

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Following incubation, remove from storage and add water

Page 16: Nematode Extraction Methods: Root Extraction Techniques

Collect nematodes on sieve

Page 17: Nematode Extraction Methods: Root Extraction Techniques

Rinse nematodes from sieve

Page 18: Nematode Extraction Methods: Root Extraction Techniques

Nematode samples ready for observation

Page 19: Nematode Extraction Methods: Root Extraction Techniques

Advantages and Limitations

Advantages Extracts migratory endoparasitic nematodes Few materials needed Simple procedure to follow

Limitations Not useful for ectoparasitic nematodes Lack of aeration can be a problem Sieves are needed to concentrate nematodes

Page 20: Nematode Extraction Methods: Root Extraction Techniques

Root Extraction Techniques:Blending and Sieving

Principle

Nematodes are released from roots due to maceration.

Page 21: Nematode Extraction Methods: Root Extraction Techniques

Materials required

Blender 40 and 325 or 500 mesh sieves Pan or bowl Wire mesh Filter paper Squeeze bottle Weighing balance Scissors

Page 22: Nematode Extraction Methods: Root Extraction Techniques

Wash roots well

Page 23: Nematode Extraction Methods: Root Extraction Techniques

Cut roots

Page 24: Nematode Extraction Methods: Root Extraction Techniques

Damp dry the roots

Page 25: Nematode Extraction Methods: Root Extraction Techniques

Weigh roots

Page 26: Nematode Extraction Methods: Root Extraction Techniques

Place roots into blender, cover roots with water

Page 27: Nematode Extraction Methods: Root Extraction Techniques

Blend at low speed for 10-20 seconds

Page 28: Nematode Extraction Methods: Root Extraction Techniques

Pour the roots into 325 or finer mesh sieve

Page 29: Nematode Extraction Methods: Root Extraction Techniques

Set up a Baermann tray

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Place filter paper on the Baermann tray

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Add water to Baermann tray

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Transfer the blended roots into the filter paper

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Incubate for 24 hours

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Remove roots from the pan

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Pour the water in the dish through a 325 or fine mesh sieve

Page 36: Nematode Extraction Methods: Root Extraction Techniques

Concentrate nematodes for observation

Page 37: Nematode Extraction Methods: Root Extraction Techniques

Advantages and Limitations

Advantages Fast method to extract nematodes from roots Foliar nematodes can also be easily extracted

Limitations Chemicals released from the roots can be injurious to nematodes Blending for long time may damage nematodes

Page 38: Nematode Extraction Methods: Root Extraction Techniques

Acknowledgments

Janete Brito, Department of Plant Industry, Gainesville, Florida

Frank Woods, Nematode Assay Lab, University of Florida, Gainesville, Florida

Joey Orajay, Entomology and Nematology Department, University of Florida, Gainesville, FL

Page 39: Nematode Extraction Methods: Root Extraction Techniques

For additional information or comments, please contact:

[email protected] [email protected] [email protected]