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doi:10.1111/j.1558-5646.2008.00458.x
ON QUANTIFYING TOLERANCE OF HERBIVORYFOR COMPARATIVE ANALYSESMichael J. Wise1,2 and David E. Carr3,4
1Department of Biology, Bucknell University, Lewisburg, Pennsylvania 178372E-mail: [email protected]
3The Blandy Experimental Farm, University of Virginia, 400 Blandy Farm Lane, Boyce Virginia 226204E-mail: [email protected]
Received January 8, 2008
Accepted June 19, 2008
As the evolutionary importance of plant tolerance of herbivory is increasingly appreciated, more and more studies are not just
measuring a plant’s tolerance, but are comparing tolerance among plant genotypes, populations, species, and environments. Here,
we suggest that caution must be taken in such comparative studies in the choice of measurement scales (and data transformations)
for damage levels and plant performance. We demonstrate with a simple scenario of two plant groups of equal tolerance how the
choice of scales can lead one to infer that the first group is more tolerant, the second group is more tolerant, or the two groups are
equally tolerant—using the identical dataset. We conclude that to make reliable, logically consistent inferences when comparing
tolerances among groups of plants, damage and performance should both be on an additive scale or both on a multiplicative scale.
KEY WORDS: G × E, logarithmic transformation, norm of reaction, plasticity, tolerance of herbivory.
The definition of tolerance of herbivory as the relative degree to
which a plant’s performance is affected by herbivore damage has
been around for many decades (Painter 1958). However, the sig-
nificance of tolerance as a genetically controlled trait that is sub-
ject to natural selection has only relatively recently been widely
appreciated (reviewed by Strauss and Agrawal 1999; Stowe et al.
2000; Fornoni et al. 2003a). With this appreciation, evolutionary
ecologists interested in tolerance have increasingly geared their
efforts toward comparative studies. For instance, tolerance has
been compared among plant species (van der Meijden et al. 1988;
Rosenthal and Welter 1995), among individuals of a species grow-
ing in different geographic locations (Paige 1999; Fornoni et al.
2003b), among individuals growing at different resource levels
(reviewed by Hawkes and Sullivan 2001; Wise and Abrahamson
2005, 2007), and among families within a population (i.e., ge-
netic variation for tolerance) (Stowe 1998; Tiffin and Rausher
1999; Strauss et al. 2003).
Several different methods have been used to measure and
compare tolerance, reflecting the variety of plant and herbi-
vore natural histories and particular interests of the investigators
(Strauss and Agrawal 1999). Although each method has its own
merits, and investigators generally take care to meet the assump-
tions of statistical tests, not all comparative analyses have been
consistent with an intuitive concept of what it means to differ
in tolerance. In particular, an inappropriate choice of scales for
analyzing tolerance differences among plant groups can lead to
inferences that may be statistically sound but logically misleading.
In this article, we discuss the types of scales used to measure
plant damage and fitness and how they can be used for analyz-
ing tolerance of herbivory. We then present a simple scenario
of two equally tolerant but unequally vigorous plant genotypes.
We use analysis of variances (ANOVAs) of simulated data on
these genotypes to demonstrate the four ways tolerance can be
estimated by combining two types of scales for damage and fit-
ness measurements. When the question of interest is whether the
genotypes differ in tolerance of herbivory, two of these ways give
the logically correct answer of equal tolerance, and the other two
give incorrect answers in opposite directions. Finally, we provide
2 4 2 9C© 2008 The Author(s). Journal compilation C© 2008 The Society for the Study of Evolution.Evolution 62-9: 2429–2434
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guidance on the appropriate combinations of damage- and fitness-
measurement scales in comparative studies of tolerance.
QUANTIFYING HERBIVORE DAMAGE
Although there are many ways to quantify herbivore damage, a
useful dichotomy for types of scales is absolute versus relative
(or additive versus multiplicative). An absolute scale may involve
counts of damaged leaves, flowers, or fruits, or the total area
of leaves eaten. Absolute damage could also be estimated by the
number of herbivores feeding on a plant, or the number of feeding
structures, such as mines or galls. Although using herbivore counts
carries the caveat that individuals may consume different amounts
of tissue, counts may be necessary for insects such as xylem or
phloem feeders, whose damage is difficult if not impossible to
measure precisely (Meyer 1993). Because such measurements
involve a sum of tissues damaged or individuals present, it is
also useful to refer to absolute damage as being measured on an
“additive” scale.
In studies of plant defense, herbivore damage is more often
quantified on a scale relative to the size of the plant (e.g., the
proportion of a plant’s total leaves, flowers, or fruits that are dam-
aged, or the percentage of a plant’s leaf area that has been eaten)
because a plant’s size is a large determinant of how much tissue
can potentially be consumed. As such, size-dependent measure-
ments of damage better represent what is intuitively meant by
resistance (the defense traits that reduce herbivore damage). In
fact, resistance is often defined operationally as one minus the
proportion of leaves (or leaf area) damaged (Simms and Triplett
1994; Stinchcombe and Rausher 2001). It is also useful to refer
to such proportional, or relative-damage measures as “multiplica-
tive” because they are calculated as the amount of tissue damaged
multiplied by the inverse of how much tissue was available.
QUANTIFYING PLANT-FITNESS IMPACTS
The effect of herbivore damage on plant fitness can also be quan-
tified using either additive or multiplicative scales. On an additive
scale, damage may cost a plant in terms of a reduction in the num-
ber of seeds, fruits, rhizomes produced, or any other performance
metric. Thinking of the fitness impact on an additive scale is
straightforward and logical, and this scale is generally employed
as a default. The main reason for departing from the additive scale
is not because of the biology of the system, but for the purposes
of statistical tests of the data.
Because means and variances are commonly positively cor-
related, if undamaged and damaged plants differ in mean fit-
ness, they are also likely to differ in terms of the variance in
their fitness measurements. Such heteroscedasticity is a violation
of parametric analysis of variance. In an analysis in which fit-
ness data are the dependent variable, researchers often perform a
log-transformation of fitness data to redress this violation. Log-
transformation has the effect of putting fitness on a multiplicative
scale, which greatly alters the relative differences among groups
along the scale. For instance, on an additive scale, a plant that pro-
duces 100 seeds is 10 times as fit as a plant producing 10 seeds;
on a logarithmic scale, however, it appears only twice as fit. We
will use the shorthand in this article of referring to the log scale
as the multiplicative scale to demonstrate that it is parallel to the
multiplicative (size-relative) damage scale.
QUANTIFYING TOLERANCE: PUTTING DAMAGE AND
FITNESS TOGETHER
Tolerance of herbivore damage is most often calculated as the
slope of a regression of plant fitness (y-axis) on damage level
(x-axis). Thus, tolerance is often envisioned as a norm of reaction
of plant fitness expressed over a range of “damage environments”
(Abrahamson and Weis 1997; Mauricio et al. 1997; Strauss and
Agrawal 1999). Using the slope is a very convenient way to ex-
press a plant’s tolerance as a single number. However, the scales
(additive or multiplicative) used for damage and fitness measure-
ments will affect the magnitude of the slope. We will demonstrate
that it is important to avoid mixing additive and multiplicative
scales when comparing tolerances between plants: Such mixing
can lead to misleading inferences about their relative tolerances.
Although achieving consistency in scales would seem to be a
basic objective, the importance of this consistency in damage and
fitness measures does not appear to have been adequately appreci-
ated when the goal has been to compare relative tolerances among
groups of plants. In fact, studies involving tolerance comparisons
have often used a multiplicative scale for damage with an additive
measure for fitness (e.g., Welter and Steggall 1993; Simms and
Triplett 1994; Mauricio et al. 1997; Shen and Bach 1997; Stowe
1998; Agrawal et al. 1999; Tiffin and Rausher 1999; Hochwender
et al. 2000). Below we illustrate with a hypothetical scenario how
a mixing of additive and multiplicative scales can provide infer-
ences regarding relative tolerances that are misleading as judged
by the intended meaning of tolerance of herbivory. In particular,
we show that the common practice of using a multiplicative mea-
sure of damage with an additive measure of fitness may lead to an
underestimation of the tolerance of more vigorous plants relative
to less vigorous plants.
MethodsSCENARIO: TWO GROUPS OF PLANTS WITH EQUAL
TOLERANCE
Consider two groups of plants (Genotypes A and B) that are sus-
ceptible to losing up to half of their leaves to herbivores, and that
are equally tolerant of leaf herbivory. Although we consider geno-
types, the plant types could just as easily represent two different
populations of plants, two sets of environmental conditions, two
2 4 3 0 EVOLUTION SEPTEMBER 2008
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different species of plants, or any other categories. Without her-
bivore damage, plants of Genotype A are more vigorous and have
a mean of 40 leaves, and plants of Genotype B have a mean of
20 leaves. For simplicity, all leaves are assumed to be of the same
size for both genotypes. Each leaf produces enough carbohydrates
to mature one seed, so undamaged plants of Genotype A produce
40 seeds, undamaged plants of Genotype B produce 20 seeds, and
the loss of each leaf leads to a reduction of one seed. Because
this relationship between leaf loss and seed-production loss is the
same for both genotypes, the two genotypes are logically judged
to have equal tolerance.
SIMULATIONS
With this scenario, we illustrate the four ways one could combine
additive and multiplicative scales for the damage and fitness axes
to compare the tolerance of the two genotypes. Two combinations
0.0 0.1 0.2 0.3 0.4 0.5 0.6
5
10
15
20
25
30
35
40
45
0 5 10 15 20 25
Se
ed
s p
er
pla
nt
5
10
15
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25
30
35
40
45
Proportion of leaves eaten
0.0 0.1 0.2 0.3 0.4 0.5 0.6
1.5
2.0
2.5
3.0
3.5
4.0
4.5
Leaves eaten per plant
0 5 10 15 20 25
Na
tura
l lo
g o
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ed
s p
er
pla
nt
1.5
2.0
2.5
3.0
3.5
4.0
4.5
A
B
C
D
Figure 1. Tolerance slopes for two plant genotypes in four different combinations of damage and fitness scales. The circles represent
means of simulated data, and the error bars represent ± 1 SEM. Genotype A is shown as solid circles and lines, and Genotype B is
shown as open circles and dashed lines. (A) Additive damage scale and additive fitness scale. The two genotypes have equal tolerance
(damage-by-genotype interaction: F1,76 = 0.18, P = 0.67). (B) Additive damage scale and multiplicative fitness scale. Genotype A has
greater tolerance than Genotype B (F1,76 = 5.03, P = 0.028). (C) Multiplicative damage scale and additive fitness scale. Genotype B has
greater tolerance than Genotype A (F1,76 = 12.26, P = 0.0008). (D) Multiplicative damage scale and multiplicative fitness scale. The two
genotypes have equal tolerance (F1,76 = 0.02, P = 0.88).
will provide the “correct” answer of equal tolerance, and two will
provide a “wrong” answer. To analyze the scenario, we simulated
a dataset of 80 individuals: 20 damaged and 20 undamaged for
each plant genotype. Undamaged individuals of Genotypes A and
B were assigned a parametric mean 40 and 20 seeds, respectively.
The mean damage level was set to half of each plant’s leaves, so
damaged plants of Genotypes A and B were assigned a parametric
mean of 20 and 10 seeds, respectively. Such a scenario could be
run on multiple genotypes (or other groupings of plants), or on
additional damage levels, or a different range of seed production.
However, this simple two-genotype case scenario allows for ease
of interpretation and generality for application to more complex
scenarios.
For each of our four schemes of comparing tolerance, we
show a graph of mean plant fitness (y-axis) versus leaf damage
(x-axis) for the simulated dataset (Fig. 1). The slopes of this
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relationship indicate the tolerance of the genotypes: the steeper
the slope, the less tolerant the plants. For each method, we also
ran a two-way factorial ANOVA on the dataset. The main ef-
fects of the ANOVA were genotype and damage, with genotype
considered a class effect and damage considered a continuous ef-
fect. A significant genotype × damage interaction would indicate
that the two genotypes have different tolerances. Because the two
genotypes were set up to have the same tolerance, a significant
interaction signifies a problem with the inference.
The simulations and ANOVAs were run in two different
ways: (1) assuming equal variance among groups, and (2) as-
suming a linear increase in variance with the mean. In the first
simulation, the variance in seed production for all treatments was
set at σ2 = 50. In the second simulation, the population variance
in seed production for damaged Genotype B plants (the group
with the lowest mean seed production) was set at σ2 = 16, and
variance was permitted to increase linearly with an increase in
mean seed production such that the population variance for un-
damaged Genotype A plants was σ2 = 100. For each ANOVA,
the homogeneity of variance assumption was tested using Brown
and Forsythe’s test (Olejnik and Algina 1987), and, as expected,
in simulation scenario 2 only log-transformed data met the homo-
geneity of variance assumption. Nevertheless, in no case was the
inference regarding the relative tolerances of the two genotypes
affected by whether the assumption of homogeneity of variance
was met, and so only results from simulation scenario 1 are re-
ported here.
ResultsMETHOD 1—ADDITIVE DAMAGE, ADDITIVE FITNESS
When both damage levels (number of leaves) and fitness (number
of seeds) are shown on additive scales, the equality of the tol-
erance of the two genotypes is illustrated clearly by the parallel
slopes (Fig. 1A). The ANOVA using additive damage and fitness
scales corroborates this conclusion, as the interaction term is not
significant (F1,76 = 0.18, P = 0.67).
METHOD 2—ADDITIVE DAMAGE, MULTIPLICATIVE
FITNESS
The same damage and fitness data are plotted in Figure 1B except
that the y-axis is now the natural logarithm of the number of seeds.
Fitness is often log-transformed prior to ANOVA to improve the
normality of the residuals. However, a log-transformation of fit-
ness not only affects the distribution of residuals, but it can change
the relative slopes. In Figure 1B, the slope for Genotype B is more
than twice as steep as for Genotype A (interaction term F1,76 =5.03, P = 0.028). Thus, one would conclude that Genotype A
is more than twice as tolerant as Genotype B, which contra-
dicts our logical interpretation that the genotypes have the same
tolerance.
Why did the log-transformation change the conclusion? The
genotype × damage interaction in the ANOVA evaluates the ad-
ditivity of the genotype and damage effects. In our scenario, the
effect of damage on seed production is a purely additive process
on an arithmetic scale for both genotypes (i.e., for each genotype
the loss of one leaf, on average, results in the loss of one seed).
Seed production in Genotypes A and B differs by an average of
20 seeds across the entire range of leaf loss, and Method 1 verifies
that the rate of seed reduction is identical in the two genotypes.
Method 2 expresses part of this linear process on a nonlinear
(logarithmic) scale. The differences between points along the y-
axis are now relative rather than absolute. In an undamaged state,
Genotype A is twice as fit as Genotype B, but when 10 leaves are
removed from each, Genotype A is three times as fit (30 seeds
vs. 10 seeds). This change in the differences between the fitness
of Genotypes A and B is revealed by the unequal slopes in Fig-
ure 1B, and the ANOVA detects this as a significant genotype ×damage interaction.
METHOD 3—MULTIPLICATIVE DAMAGE, ADDITIVE
FITNESS
As discussed above, damage is commonly measured on a multi-
plicative scale in resistance studies. In our scenario, if fitness on
an additive scale is plotted against the same damage levels, but
with damage represented on a multiplicative scale (in terms of
percentage of a plant’s leaves consumed), the tolerance slope for
Genotype A would be twice as steep as for Genotype B (Fig. 1C).
As in Method 2, the ANOVA of data on these scales reveals a
significant genotype × damage interaction (F1,76 = 12.26, P =0.0008), indicating a difference in tolerance. The conclusion, how-
ever, is the opposite to that in Method 2: Genotype B would be
regarded as twice as tolerant as Genotype A using Method 3.
The differences between the conclusions drawn from Meth-
ods 1 and 3 are due to a change from an additive scale to a
multiplicative scale in the measurement of damage. Undamaged
plants of Genotypes A and B differ by an average of 20 seeds, but
plants experiencing 50% damage differ by only 10 seeds. This
nonadditivity of genotypic and damage effects is revealed by the
significant interaction.
The difference in conclusions drawn from Methods 2 and 3
are due to the fact that Method 2 uses multiplicative scale for plant
fitness, whereas Method 3 uses a multiplicative scale for herbivore
damage. Genotype A shows a smaller proportional drop in fitness
relative to Genotype B for each leaf lost to herbivory (Fig. 1B).
Genotype A, however, loses two seeds for every 5% defoliation
increment as compared to the loss of only one seed by Genotype B
(Fig. 1C).
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METHOD 4—MULTIPLICATIVE DAMAGE,
MULTIPLICATIVE FITNESS
If damage is represented on a multiplicative scale and fitness is
log-transformed, then the fitness-damage slopes of the two Geno-
types are again parallel (Fig. 1D). In addition, the interaction
term in the ANOVA is not significant (F1,76 = 0.02, P = 0.88),
indicating that the genotypes are equally tolerant. This conclu-
sion agrees with intuition: if two plants that lose proportionately
the same amount of tissue have proportionately the same loss in
fitness, the two plants are equally tolerant.
This conclusion is the same as that in Method 1 because
both damage and fitness are again represented on the same type
of scale. In Method 1, there is a linear relationship between leaf
loss and seed production for both genotypes. In Method 4, this
linear process on an arithmetic scale is translated into a log-linear
process. Just as Figure 1A shows an equal drop in seed production
for each leaf lost, Figure 1D shows an equal drop in proportional
seed production of the two genotypes for each proportional loss
of leaves.
DiscussionEmpirical studies comparing tolerance often use an ANOVA in
one of the manners illustrated above. For instance, a study looking
for genetic variation among families in tolerance would focus on
the damage-by-family interaction term (Simms and Triplett 1994;
Fineblum and Rausher 1995; Mauricio et al. 1997; Agrawal et al.
1999; Tiffin and Rausher 1999; Stinchcombe and Rausher 2002).
Similarly, a test of whether resource levels affect tolerance of
herbivory would focus on the interaction between damage and
resource treatment (Wise and Abrahamson 2005, 2007). As the
above scenario illustrates, the choice of scales for damage and
fitness is critical to the significance of the interaction terms, and
thus the choice can affect the validity of the inferences regarding
the presence of genetic variation for tolerance or the influence of
resource levels on tolerance.
Specifically, if groups of plant genotypes (or families, or
populations) differ in fitness regardless of damage (i.e., they dif-
fer in vigor), then an ANOVA will underestimate the tolerance
of the more vigorous genotypes and overestimate the tolerance
of the less vigorous genotypes if fitness is measured on an addi-
tive scale and damage is measured on a multiplicative scale (cf
Fig. 1C). Conversely, an ANOVA of fitness on a multiplicative
(or logarithmic) scale when damage is measured on an additive
scale will overestimate the tolerance of the more vigorous and un-
derestimate the tolerance of the less vigorous genotypes (cf Fig.
1B). In either case, erroneous conclusions regarding the presence
of genetic variation for tolerance are more likely the greater the
difference in vigor among genotypes. Similarly, if two groups of
plants are equally tolerant of herbivory but differ greatly in fit-
ness between environments, then an ANOVA that mixes additive
and multiplicative scales for damage and fitness is likely to con-
clude erroneously that tolerance of herbivory differs between the
environments.
Although an experimenter has some latitude in choosing the
scale of damage and fitness measurements, the particular details
of the study system will often dictate these choices. The choice
of the scale for damage measurements is often dictated by the
natural history of the herbivore or the nature of its damage (e.g.,
leaf chewing, phloem sucking, stem boring, etc.). In some exper-
iments, damage treatments are carefully imposed by the experi-
menter, and thus the choice of scale may be flexible. For instance,
one may choose to damage the same number of leaves on each
plant (an additive scale), or one may damage the same proportion
of each plant’s total leaf area (a multiplicative scale).
When deciding on what plant-performance measure to use
for plant fitness, the primary concern is not what type of scale,
but which performance variable is the closest to true fitness—the
potential for genetic contribution through progeny. This variable
is usually measured on an additive scale (e.g., number of seeds,
biomass, or number of nodes surviving). Unlike damage, fitness
is always a response variable—it is not something that the ex-
perimenter can control with predetermined treatments. Thus the
choice of scale for fitness comes into play not in the measurement
phase, but in the analysis phase, and the choice generally takes
the form of whether or not to transform the data.
We do not suggest that there is any inherently best way to
measure herbivore damage or plant performance. Furthermore, the
preferred method to quantify tolerance will depend on the type of
question being addressed. We suggest only that when analyzing
the relative tolerance of different groups of plants, the type of scale
used to quantify both damage and plant performance should be the
same (i.e., both additive or both multiplicative). If this scale com-
patibility cannot be accomplished at the stage of measurement,
then it can likely be accomplished by data transformation prior to
the stage of the analysis that compares the relative tolerances of
the plant groups. For instance, if damage measurements are on a
multiplicative scale (e.g., proportion of leaf area lost), then plant
fitness should also be on a multiplicative scale. This compatibility
may require a log-transformation of the fitness variable. Alterna-
tively, if damage must be measured on an additive scale, then the
fitness scale should also be additive (i.e., not log-transformed). If
distributional assumptions of the statistical tests employed require
that the fitness variable should be log-transformed, then compat-
ibility of scales may be achieved through a log-transformation of
the additive damage measurement. In the end, the best solution
in many cases may be to perform and present the analyses more
than one way (e.g., Stinchcombe and Rausher 2002) to ensure
that the statistical choices do not obscure the biological meaning
of tolerance.
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These analyses and the advice that they generated were de-
veloped in the context of our research on the evolutionary ecology
of herbivory tolerance. We intend the advice to be prescriptive for
future studies (rather than a criticism of past studies), as com-
parative analyses of tolerance continue to gain momentum in the
fields of plant-herbivore ecology and evolution. Nevertheless, it
is important to note that the study of tolerance of herbivory is
just a specific case under the general topic of the study of en-
vironmentally induced phenotypic plasticity. Our advice about
choosing compatible scales is relevant to any such studies of
plasticity, particularly those studies in which the x-axis (the envi-
ronmental variable) has a continuous scale (e.g., fertilizer level,
salinity,%shade, etc.). In a recent paper on phenotypic plastic-
ity, Stanton and Thiede (2005) provided similar cautionary ad-
vice about the potential for the log-transformation to change the
significance of a genotype-by-environment interaction. Similar
concerns about scale transformations providing misleading infer-
ences have also been made in the seemingly unrelated field of
inbreeding depression (Johnston and Schoen 1994). Thus, the ad-
vice we give is likely to have resonance beyond the community of
biologists interested in plant tolerance of herbivory. Regardless of
the particular field of study, as Stanton and Thiede (2005) advice,
it makes little sense to weigh statistical convenience more heavily
than biological insight.
ACKNOWLEDGMENTSWe thank W. G. Abrahamson and C. P. Blair, and two anonymous review-ers for constructive comments on the manuscript. The National ScienceFoundation provided financial support under the grants DEB-0515483 toW. G. Abrahamson and MJW and DEB-0614395 to DEC and M. D. Eu-banks. Additional support was provided by The University of Virginia’sBlandy Experimental Farm through NSF BIR-9512202. Any opinions,findings, and conclusions expressed in this material are those of the au-thors and do not necessarily reflect the views of the National ScienceFoundation.
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Associate Editor: T. Juenger
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