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ACD Labs Neuchatel Open Information Standards for Lab Informatics—Allotrope Foundation Gerhard Noelken, Pfizer web: www.allotrope.org mail: [email protected]

Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

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Page 1: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

ACD Labs

Neuchatel

Open Information Standards forLab Informatics—Allotrope Foundation

Gerhard Noelken, Pfizer

web: www.allotrope.org

mail: [email protected]

Page 2: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Pharmaceutical Sciences PTx

• Analytical Development– Develop analytical test methods

– Stability and clinical release

• Chemical R&D– Develop chemistry to make drug substance (different scales)

– Manufacture API for clinical supplies

• Pharmaceutical Development– Fully characterise and understand unique drug properties

– Convert raw drug to drug product (e.g. tablet)

– Design new forms of drug deliveryControlled-release, Inhaled, Injected, etc.

• Global CMC

• Clinical Supplies• Large scale

trials/• manufacture

Page 3: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

PFIZER AT DISCOVERY PARK, SANDWICH

At The Discovery Park site in Sandwich, Kent Pfizer has world-class facilitiesand expert scientists working in an innovative environment

Pfizer’s Pharmaceutical Sciences operations at the site includes the company’s unique pilot plant production and solid and liquid dose manufacturing facilities

Other critical functions at Sandwich include Worldwide Safety and Regulatory; Quality Assurance; Commercial Business Units and Business Support Functions(HR, BT, Finance, Patents etc.)

Page 4: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

New Business ChallengesLife science Information Landscape

4

Yesterday Today Tomorrow

Innovation Model Innovation inside Searching for Innovation Heterogeneity of collaborations. Part of wider ecosystems

IT Internal apps & data Struggling with change Security and Trust

Cloud/ Services

Data Mostly inside Partially shared Distributed

Portfolio Internally driven and owned Shared portfolio

Big Life Science

Company

Yesterday Today Tomorrow

Page 5: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Manual data transcriptions

Raw Data

Electronic Raw Data

Import/

Copy Paste/

Attach

Analyzed

Data

Analysis

Programs

Import/

Copy Paste/ Attach

Analyzed Data

Excel

Manually

Enter

Single Point

Data

Reference/Link

to Raw Data

Reference/Link DMID

FileShare

DMID

(produced in Word)

GECR

(Registration)

CSS (Chem

Structure

Search)

Formulation

Instrumentation Formulation Lab

Data Systems

Research Systems

M3 Clinicopia

Search Structure

Read PF#, mol file

PF#

Lookup &

Validation

Read/Update

Drug Pkg

Properties

Excel

Word

PPT

etc..

Embed/

Copy Paste/

Attach

Data

From Std

Windows

Tools

CCT

(Comp Chem

Properties)

Compound

Properties

NuGenesis

SDMS

LabWare

LIMS

(AD)

Approved

DMID

(PDF)

Ref/Link to/Import Stability Data,

CoA, Summary Test Results, SampleIDs

Read/Update

API/DP Physical

Properties

Master GMP Data

Repositories

Supply Chain SystemsPharm Sci

Systems

Formulations

System Architecture

Watson LIMS

Gastro Plus

In vivo

data

RGate

RIF

Research ELN

(CEN)

Read RIF Data

Upload via

BioloaderMed Chem

Data

Blend

Property

Form

Prediction

GDMS

Electronic Raw DataMAPP/

MASS

Read

Form Data

Write Form

updatesForm Sample

Test Request

Instr Initiation

Formulations

ELN

(Symyx)

Expt Work

Formulation

Scientist

Chromatography Electronic Raw and Analyzed Data

Empower

CDSChrom

Electronic

Raw Data

Key

Electronic link

needed

Electronic link

In place or

planned

Manual

Other ELNs

(Form ELN -

WOMS)

Other

Systems

Global Ref.

Data

(now EVS)

Master/Meta Data

Analytical Requests /

Results

Red arrows indicate manual data exchange.Scientist is still the key broker for Data and Information.

Page 6: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

We pay scientists to do what?!?!

• we manually compile and write static reports– candidate selection documents

– internal technical reports

– certificates of analysis

– stability reports

– specifications

– release documents

– IQ, OQ, PQ, PM

– IND, NDA, MAA

– et cetera

At work…

• computers give usbutton-click, interactive, drill-down reports

At home…

Page 7: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Imagine a day when...Document

PreparationData

Exchange

Method / Data Transfer

Page 8: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

7 symptoms at every company

Document Preparation

Regulatory Compliance

Data Errors

Data Silos

Innovation Constrained

Data Exchange

Data Management

• Costs affect nearly every person, department, and process in every company in our industry

• Downstream effects go well beyond the traditional “analytical laboratory”

Page 9: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Treat the disease…

Symptoms

Disease Pathology

Document Preparation

Data ErrorsData

Exchange

Data Silos

Data Management

Regulatory Compliance

Innovation Constrained

Page 10: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

The ‘Framework’ treats the disease…

Automated Documents

Regulatory Compliance

Eliminate Data Errors

Eliminate Data Silos

Innovative Ecosystem

Fast Data Exchange

Better Data Management

Page 11: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

How the Framework treats the disease…

• Compatible software

• Class Libraries, SDK, web service

• Lowers barriers to adoption

• Common data formats facilitate data exchange & innovation

• AnIML, HDF, etc

• Eliminates or attenuates cost of 7 symptoms

• Scientists focus on science

• Consistency across all platforms, departments, partners

• Massive data mining & knowledge management opportunities

Page 12: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Real Deliverables Emergent Outcomes

software development starts this summer

Not a ‘Standards Body”;A holistic approach to build upon & promote industry standards & best practices, by providing software that instantiates them

Page 13: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

FRAMEWORK Components essential to ecosystem

FREE CORE OPEN-STANDARD

Commercial Instruments &

Software

eLN, LIMS, Archiving, Data Warehouse, Etc..

The Ideal State

Commercial Data Management Solutions

• Vendors create software using framework & standards that allows customers to harmonize data

• Instruments produce data natively in standard representation

• Data management solutions consume and understand data natively in standard representation

10-April-2013

Page 14: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

FRAMEWORK Components essential to ecosystem

FREE CORE OPEN-STANDARD

Commercial Instruments &

Software

eLN, LIMS, Archiving, Data Warehouse, Etc..

The Transition

Commercial Data Management Solutions

• Data & metadata live in the framework in ‘standard’ • Interfaces required for existing applications/systems

Co

nve

rsio

n t

oo

ls &

se

rvic

es

Plu

g-in

s

eLN, LIMS, Archiving, Data Warehouse, etc

Legacy Data Legacy

Data Legacy Data 10-April-2013

Page 15: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

The development of a collaboration

Spring 2011

• Papers in Am. Pharm. Rev. generate interest*

Summer 2011

• IQ ALG – forms Working Group

• WG develops peer-reviewed technical Project Description

Fall/Winter 2011

• Positive response from instrument companies

• IQ Board sub-team, WG, DBR progress project toward formational meeting

Summer 2012

• Allotrope Foundation formational meeting

Fall/Winter 2012

• Project Definition

• RFP initiated

• Pre-project analyses

Summer 2013

• Software development starts

James M. Roberts, et al., Informatics in the Analytical Laboratory: Vision for a New Decade, American Pharmaceutical Review, September/October 2010James M. Roberts, et al., The Adaptable Laboratory: A Holistic Informatics Architecture, American Pharmaceutical Review, January/February 2011

Page 16: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Current Scope: Analytical Chemistry for Our Industry

• Drug substance, drug product release, stability

• Compound registration

• Development understanding

• Process chemistry monitoring

Functional areas in CMC, Discovery

• Small molecules

• Biopharmaceuticals

Analytical chemistry

• Gene expression, bio-assays, microarray, clinical data

Out of scope of current project

Page 17: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

Next steps: 2013 - 2015

Iterative solutions released as we go, not waiting for perfection or completeness

Demonstrate value & tractability

Development starts in 2013

Use specific problem space & PoCs to focus 1st phase of development

Hire established software team to work with SMEs from member companies to build Framework

Intent is something new & vendor independent, not a local fix

RFP responses under review, decision anticipated 2Q 2013

Page 18: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

The elephant in the room

• Every company spends lots of money and FTE resource treating or living with the symptoms…

• The moment has arrived for the industry to embrace a pre-competitive approach to treat the underlying disease

10-April-2013

Document Preparation

Regulatory Compliance

Data Errors

Data Silos

Innovation Constrained

Data Exchange

Data Management

Page 19: Open Information Standards for Lab Informatics Allotrope … · – Manufacture API for clinical supplies • Pharmaceutical Development – Fully characterise and understand unique

10-April-2013

Svetlana Lyapustina, Ph.D.

Senior Science Advisor| Drinker Biddle & Reath LLP

+1-202-230-5179

[email protected]

[email protected]

To join or learn more contact:

“If you want to go fast, go alone. If you want to go far, go together.” – African proverb

Join usAbbvie Amgen Baxter

Boehringer-Ingelheim Bristol-Myers Squibb Eisai

Pfizer GlaxoSmithKline Merck