Organic Chemistry Functional Groups 221160

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    Organic Chemistry I

    From atoms to molecules and beyond Functional rou!s

    "onding and #olecular $tructure

    %esonance and &somers

    &ntermolecular interactions

    'ydrocarbons

    $ubstitution and Elimination %eactions()ygen Containing Com!ounds

     *mines

    2

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    3

    Lewis Dot Structures

    %ules +or ,riting Find total - valence e.

    1 e. !air / 1 bond0 *rrange remaining e. !er octet rules E)ce!t eriod 3 can have e)!anded octet vacant d orbital

    reuired +or hybridi5ation6

    Formal Charge - valence e. isolated atom6 - valence e. le,is structure6

    $um o+ +ormal charge +or each atom is the total charge onthe molecule

     *C* charge distribution de!ends on electronegativity

    3

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    ?

    Functional Groups

    List #1- Critical for the MC!

     *l=ane CC *l=ene C/C *l=yne CC

     *lcohol %(' Ether %(% *mine %

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    A

    Functional Groups

    List #"- lso seful

     *l=yl $alogen emdihalide Bic dihalide

    'ydro)yl  *l=o)y 'emiacetal 'emi=etal #esyl grou! osyl grou!

    Car%onyl  *cetal  *cyl

     *nhydride  *ryl &en'yl (henyl 'ydra5ine 'ydra5one Binyl Binylic  *llyl

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    77

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    &on)s

    y!es &onic

    Covalent Coordinate covalent

    olar covalent

    'ydrogen "onds

    com!lete trans+er o+ electrons

    shared electrons

    (ne atom !rovides both electrons in ashared !air.

    uneual sharing o+ electrons

    bonds bet,een !olar molecules

    containing ' and O* +* or F

    88

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    9

    Co,alent &on)s

    $igma σ "et,een s orbitals

    $mall strong lots o+ rotation

    i Π "et,een ! orbitals

    :iscreet structure ,ea=er than sigma no rotation

    9

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    Co,alent &on)s

    1D1D

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    &on)s

    &n the !i bond o+ an al=ene the electron !air have

     *. 33 ! character and are at a lo,er energy level

    than the electron !air in the σ bond.

    ". 33 ! character and are at a higher energy levelthan the electron !air in the σ bond.

    C. 1DD ! character and are at a lo,er energy level

    than the electron !air in the σ bond.

    :. 1DD ! character and are at a higher energy level

    than the electron !air in the σ bond.

    11

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    12

    $y%ri)i'ation

    12

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    $y%ri)i'ation

    %emember *ll !i bonds are bet,een orbitals

    e+toverG and $ orbitals hybridi5e

    !artici!ate in sigma bonds

    E) '2C/C'2

    13

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    14

    $y%ri) &on)s

    $u++i) C bonds 'ybridi5ation

    ercent

    $

    "ond *ngle

    "ondength

    "ond$trength

    ane

    ene

    yne

    yl

    14

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    1?

    $y%ri) &on)s

    $u++i) C bonds 'ybridi5ation

    ercent

    $

    "ond *ngleo

    "ondength

    !m6

    "ond$trength

    =HImol6

    ane CC s!3 2?7? 1D9.? 1?4 34A

    ene C/C s!2 33AA 12D 134 A12

    yne C/C s! ?D?D 18D 12D 83?

    yl $idechain

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    1A

    Special Cases O an) +

    >no, ty!ical bonding +or C

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    17

     *6 s!2 s!2

    "6 s!2 s!3

    C6 s!3 s!3

    :6 s!3 s!2

    For the molecule 1*. penta)iene* what

    type of hy%ri)i'ation is present incar%ons # 1 an) # / respecti,ely0

    17

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    18

    S2(34 molecular geometry

    valance shell electron !air re!ulsion

    E(#E%J / #inimi5e electron re!ulsion

    18

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    molecule Lewis structure Shape molecule Lewis structure Shape

    &eCl" Linear* sp

    SF. $eesa, SO/

    !rigonalplanar* sp"

    ICl/ sha!ed +O"

    - &ent

    C$. !etrahe)ral* sp

    / +$/

    !rigonal

    (yrami)al

    (Cl5

    !rigonal%ipyrami)al*

    )sp/SF

    6

    Octahe)ral*)"sp/

    IF5 $uare yramidal ICl.

    - $uarelanar 

    S2(31. :ra, the e,is dot structure

    2. lace electron !airs as +ar a!art as !ossible

     then large atoms then small atoms

    3.

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    +O7 L2!8S MO2 S!FF 3O+D9

    KeLve seen static !ro!erties o+ atoms and moleculesM

    2D

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     Delocali'e) e- an) 3esonance%esonance +orms di++er only in location o+ e.

    o be a signi+icant resonance +orm must be sta%le

    %emember octet rule and consider +ormal charge

    %eal structure / blend o+ !ossible resonance

    structures resonance hybridG

    21

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    3esonance4 ci)s an) &ases

    Con;ugate stabili5ed by %E$(

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    Stereochemistry

    &somers same molecular +ormula di++erent

    s!atial arrangements

    :i++erent s!atial arrangements  

    di++erent !hysical and chemical !ro!ertiesO

    23

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    Stereochemistry4 Isomers

    C(

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    Stereochemistry4 Isomers

    %(*&(<

    Conformational isomers :i++erent s!atial

    arrangement o+ same molecule but doesnLt reuirebond brea=ing to interconvertO rotationalG isomers Chair vs. boat $taggered vs Ecli!sed auche vs *nti

    :(E$ reuire bond brea=ing to interconvert

    configurational isomers2?

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    Stereochemistry4 Isomers

    :("E "(

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    Stereochemistry4 Isomers

    Khat =ind o+ isomers are the t,o com!ounds belo,P

    = :iastereomers

    &= Enantiomers

    C= Constitutional isomersD= eometric &somers

    28

    http://en.wikipedia.org/wiki/Image:L-tartaric_acid.pnghttp://en.wikipedia.org/wiki/Image:D-tartaric_acid.pnghttp://en.wikipedia.org/wiki/Image:D-tartaric_acid.pnghttp://en.wikipedia.org/wiki/Image:L-tartaric_acid.png

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    Enantiomers di++er in rotation o+ !lane!olari5ed light E)cess o+ one enantiomer causes rotation %ight cloc=,ise de)trarotary d6 or N e+t countercloc=,ise levarotary l6 or Q

    $!eci+ic rotation RaS / a I lTd6

    %acemic ?D?D mi)t o+ enantiomers

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    Stereochemistry4 Chirality

    % and $

    1. *ssign !riority by atomic number  &+ attachments are the same loo= at the β atoms

    2. (rient lo,est !riority -46 a,ay +rom the observer 

    3. :ra, a circular arro, +rom 1 to 2 to 3 % / cloc=,ise $ / countercloc=,ise

    E and U :i++erent than cis and trans U/ same side o+ high !riority grou!s E/o!!osite side o+ high !riority grou!s

    3D3D

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    7$! &O! &2!722+ MOL2CL2S0

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    Intermolecular interactions

    :ue to :&(E #(#E

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    Intermolecular interactions

    ondon :is!ersion Forces "et,een 2 instantaneous di!oles

    :i!oledi!ole interactions :i!oledi!ole or di!oleinduced di!ole

    'ydrogen "onds

    $trongest di!oledi!ole interaction

    33

    7hen al%uterol is )issol,e) in water* which of the

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    7hen al%uterol is )issol,e) in water* which of the

    following hy)rogen-%on)e) structures )oes +O!

    contri%ute to its water solu%ility0

    34

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    $>D3OC3&O+S

    he +irst and sim!lest class o+ molecules ,e

    need to get +riendly ,ith +or est :ay

    3?

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    3A

    I(C +aming Con,entions

    I(C 3ules for l?ane +omenclature

    1=  Find N name the longest continuous carbon chain.

    "=  &denti+y and name grou!s attached to this chain.

    /= 

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    l?anes

    hysical ro!erties $traight chains # and " increase ,ith length "ranched chains

    " decreases less sur+ace area  v:K +orces6

    # Q a little more com!licated due to crystal structure Khen com!ared to the straight chain analog the straight

    chain ,ill have a higher # than the branched molecule." amongst branched molecules the greater thebranching the higher the #.

    39

    l?anes Important 3eactions

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    4D

    l?anes-Important 3eactions(retty Darn nreacti,e

    Com%ustion  *l=ane N ()ygen N 'igh energy in!ut +ire6 roducts '2( C(2 'eat

    $alogenation &nitiation ,ith B light

    'omolytic cleavage o+ diatomic halogen

    Jields a +ree radical

    ro!agation chain reaction mechanisms6 'alogen radical removes ' +rom al=yl Jields an al=yl radical ,hich can ma=e more radicals

    ermination %adical bonds to another radical

    %eactivity o+ halogens F V Cl V "r VVV &

    $electivity o+ halogens 'o, selective is the halogen in choosing a !osition on an al=ane6  & V "r V Cl V F

    more electronegative means less selective

    $tability o+ +ree radicals more substituted / more stable so halogenation @ most su%8) C

    arylVVVal=eneV 3o

     V 2o

     V 1o

     Vmethyl

    4D

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    Cycloal?anes

    eneral +ormula C'26n or Cn'2n

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    Cycloal?anes

    Cyclohe)ane E)ist as chairG and boatG con+ormations Chair con+ormation !re+erred because it is at the lo,est

    energy. K'JP6

    $ubstituents can occu!y a)ial and euatorial !ositions. *)ia A6 !er!endicular to the ringEuatorial A6 roughly in the !lane o+ the ring "ig substituents !re+er to be euatorial Q less cro,dingGO

    Khen the ring reverses its con+ormation substituentsreverse their relative !osition

    42

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    Cyclohe

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    32C!IO+S99

    hings start getting more e)citing once ,e start substituting ' +or

    more interesting +unctional grou!sM so letLs get ready +or some

    44

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    4?

    Su%stitutions

    $ubstitution

    one +unctional grou! re!laces another 

    Electro!hile ,ants electrons has !artial N charge

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    4A

    2liminations

    Elimination

    +unctional grou! lost double bond made

    (+ten a e,is base is res!onsible +or ta=ing 'leaving behind an e)tra !air o+ e. +or the /

    he o!!osite o+ elimination is a))ition

    4A

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    Su%stitution an) 2limination

    E1 elimination unimolecular  #echanism t,oste!

    1. s!ontaneous +ormation o+ carbocation $(K6 2. "ase abstracts beta '

    >inetics rate de!ends only on the substrate %/=RreactantS Favored ,ith good stable carbocation ,ea= base

    rotic solvents stabili5e carbocation Can see carbocation rearrangement

    48

    7hich of the following

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    g

    car%ocations is the most sta%le0

    =C'3C'2C'2C'2

    &=C'3C'2C'2C'C'3

    C

    = C'363C

    D=C'3 49

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    ?D

    Su%stitution an) 2limination

    $

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    ?1

    Su%stitution an) 2limination

    E2 elimination bimolecular  #echanism C(inetics rate de!ends on substrateNbase %/=RsubstrateSR"S Favored ,ith strong bul=y base

    &+ you see 'E* thin= Elimination E2 reactions o+ten run in solvent o+ con;ugate acid K'JP6

    ?1

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    ?2

    &en'ene

     * s!ecial molecule a s!ecial case o+ substitutionO  *ctually itLs addition and then elimination.

     

     *romatic molecule $tabili5ed by resonance ndergoes net su%stitution not addition K'JP6

    $ubstituents determine subseuent reactivity Electron donating grou!s activate the ring and are ortho!ara directors Electron ,ithdra,ing grou!s deactivate the ring and are meta directors $alogens are electron ,ithdra,ing " are ortho!ara directors

    ?2

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    ?3

    &en'ene4 Su%stituent 2ffects

    ?3

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    &n ,hat order ,ere the substituents addedP

    'o, can you tellP

    ?4

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    OA>G2+-CO+!I+I+G COM(O+DS

     *nother class o+ molecules ,e need to be +amiliar ,ith

    ??

    O C t i i C )

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    ?A

    Oetones

    Carbo)ylic *cids

     *cid :erivatives *cid Chlorides

     *nhydrides

     *mides >eto *cids and Esters

    ?A

    l h l

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    ?7

    lcohols

    (ne o+ the most common reactions o+ alcohols isnucleo!hilic substitution. Khich o+ the +ollo,ingare %E in regards to $

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    ?8

    lcohols

    hysical ro!erties olar  'igh # and " K'JP6 #ore substituted / less acidic

    C'363C(' !>a / 18.DD C'3C'2(' !>a / 1A.DD C'3(' !>a / 1?.?4

    Electron ,ithdra,ing substituents stabili5e al=o)ide ion and lo,er !>a. ertbutyl alcohol !>a / 18.DD a / ?.4

    eneral !rinci!les ' bonding  *cidity ,ea= relative to other ( containing com!ounds

    ?8

    lcohols

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    ?9

    +aming

    $elect longest C chain containing the hydro)yl

    grou! and derive the !arent name by

    replacing  –e en)ing of the correspon)ing

    al?ane with  –ol =

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    lcohols-O

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    A1

    Common o)idi5ing and reducing agents

    enerally +or the #C* ()idi5ing agents have lots o+ o)ygens

    %educing agents have lots o+ hydrogens

    O#n(4

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    A2

    synthesis

     *ldehydes =etones esters and acetates can bereduced to alcohols , strong reducing agents suchas

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    A3

    ,ia a strong aci) catalyst

    %(' N 'Cl %Cl N '2D

    (' is converted to a much better leaving grou!,hen !rotonated by a strong acid

    For tertiary alcohols 'Cl or '"r  rimaryIsecondary alcohols are harder need $(Cl2 or

    "r 3

    A3

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    A4

    &n the reaction above i+ the reagents in the+irst ste! ,ere re!laced ,ith i*l'4 ,hat

    !roduct ,ould resultP

     a6 c6

    b6 d6

    A4

    ('

    ('

    ('

    (

    ('

    ('

    (''(

    Car%onylsC % ) %l % ) ) t O

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    A?

    Car%on )ou%le %on)e) to Oetones nucleo!hilic addition6Carbo)ylic *cids nucleo!hilic substitution6

     *mides

    A?

    l)ehy)es an) etones

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    AA

    l)ehy)es an) etones

    hysical !ro!erties Carbonyl grou! is !olar  'igher " and # than al=anes K'JP6 #ore ,ater soluble than al=anes K'JP6

    rigonal !lanar geometry reduction yields racemic mi)tures

    eneral !rinci!les E++ects o+ substituents on reactivity o+ C/( e ,ithdra,ing increase

    the carbocation nature and ma=e the C/( more reactive

    $teric hindrance =etones are less reactive than aldehydes  *cidity o+ al!ha hydrogen carbanions α β unsaturated carbonyls resonance structures

    AA

    l)ehy)es an) etones+aming lalala it8s the same rules9

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    A7

    +aming lalala it s the same rules9

    +aming l)ehy)es %e!lace terminal –e o+ corres!onding al=ane ,ith  –al =

    arent chain must contain the QC'( grou!

    he QC'( carbon is C1

    Khen QC'( is attached to a ring ,e say carbaldehydeG

    +aming etones %e!lace terminal –e o+ corres!onding al=ane ,ith  –one.

    arent chain is longest chain containing =etone

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    l)ehy)es an) etones

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    A9

    l)ehy)es an) etones

    >etoenol automerism >eto tautomer is !re+erred alcohols are more

    acidic than aldehydes and =etones6.

    A9

    Guanine* the %ase portion of guanosine* e

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    7D

    7hich of the following structures represents the

    enol form of guanine0

    7D

    l)ehy)es an) etones-

    reactions at a)acent positions

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    71

    reactions at a)acent positions

     *ldol aldehyde + alcohol 6 condensation (ccurs at the al!ha carbon

    i electrons in enol act as nucleo!hile

    "ase cataly5ed condensation removal o+ '2(6

    Can use mi)tures o+ di++erent aldehydes and =etones

    71

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    l)ehy)es an) etones

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    73

    l)ehy)es an) etones

    (rganometallic reagents

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    74

    Car%o

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    Car%o

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    7A

    +aming

    Carbo)ylic acids derived +rom o!en chainal=anes are systematically named by

    re!lacing the terminal –e o+ the

    corres!onding al=ane name ,ith –oic acid . Com!ounds that have a QC(2' grou!

    bonded to a ring are named using the su++i)

     Qcarbo)ylic acid. he QC(2' grou! is attached to C -1 and is not

    itsel+ numbered in the system.

    7A

    Car%o

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    77

    Carbo)yl grou! reactions etones undergo a))ition K'JP6

    #ust contain a good leaving grou! or a substituent

    that can be converted to a good leaving grou!.

    77

    Car%o

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    78

    %eduction Form a !rimary alcohol

    i*l'4 is the reducing agent

    C'3C'26AC((' C'3C'26AC'2('i*l'4

    78

    Car%o

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    79

    Carbo)yl grou! reactions :ecarbo)ylation =no, that it ha!!ens C(26

    79

    Car%o

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    8D

    Fischer Esteri+ication %eaction *lcohol N Carbo)ylic *cid  Ester N Kater  *cid Cataly5ed !rotonates Q(' to '2( e)cellent

    leaving grou!6 *lcohol !er+orms nucleo!hilic attac= on carbonyl

    carbon

    hese bonds are

    bro=en

    'N

    8D

    Car%o

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    81

    p

    $ubstitution reactions =eto reactions sho,n

    consider enol reactions

    To make->

    SOCl2

      or PCl3

    Heat, -H2O

    R'OH, heat, 

    H+-

    R 2NH 

    heatHO-

    81

    Car%o

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    82

    'alogenation enol tautomer undergoeshalogenation

    82

    ci) Deri,ati,es+aming

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    83

     *cid 'alides %C(Y6 oyl halideG instead o+ oic acidG e) ethanoyl chlori)e

     *cid *nhydrides %C(2C(%L6 Hust re!lace the ,ord acid ,ith anhydride.

    2 acetic acid acetic anhy)ri)e nsymmetrical anhydrides are named by citing the t,o acids al!habetically.

     *cetic acid N ben5oic acid acetic %en'oic anhy)ri)e Esters %C(2%L6

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    8?

    ci) Deri,ati,es- 3eactions ofDeri,ati,es

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    8A

    Z'ydrolysis N,ater carbo)ylic acidZ *lcoholysis Nalcohol ester Z *minolysis Nammonia or amine amideZ%eduction N '  aldehyde or alcoholZrignard N (rganometallic  =etone or alcohol

    8A

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