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Phenotypes at the Saccharomyces Genome Database http://www.yeastgenome.org/

Phenotypes at the Saccharomyces Genome Database

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Phenotypes at the Saccharomyces Genome Database. http://www.yeastgenome.org/. Wild-type. acm1. van Attikum H, et al., (2004) Cell 119(6):777-88. Martinez J, et al., (2006) MCB 26(24):9162-9176. Grushcow JM, et al., (1999) Genetics 153(2):607-620. Sample S. cerevisiae phenotypes. - PowerPoint PPT Presentation

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Page 1: Phenotypes at the  Saccharomyces  Genome Database

Phenotypes at the Saccharomyces Genome Database

http://www.yeastgenome.org/

Page 2: Phenotypes at the  Saccharomyces  Genome Database

van Attikum H, et al., (2004) Cell 119(6):777-88.

Sample S. cerevisiae phenotypes

Martinez J, et al., (2006) MCB 26(24):9162-9176.

Wild-type acm1

Grushcow JM, et al., (1999) Genetics 153(2):607-620.

Page 3: Phenotypes at the  Saccharomyces  Genome Database

van Attikum H, et al., (2004) Cell 119(6):777-88.

Gene: INO80Experiment type: classical geneticsMutant Type: nullQualifier: decreasedObservable: resistance to chemicalsChemical: methyl methanesulfonate (MMS)

S. cerevisiae phenotype annotation

Page 4: Phenotypes at the  Saccharomyces  Genome Database

Current Status

Feature Type

Experiment TypeUnique loci

with annotationsTotal number of annotations

ORF (5784)

Classical genetics 643 1426

Competitive growth 1145 1961

Systematic null mutation set 5438 11084

RNA (418) Classical genetics 56 60

Others (731)Classical genetics 9 31

Systematic null mutation set 12 13