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Potential student research projects QUT Biology and Environmental Science

QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

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Page 1: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

Potential student research projects

QUT Biology and Environmental Science

Page 2: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

Research in Biology & Environmental Science at QUT

Our school brings together multidisciplinary research teams to address global challenges, ranging from food security to climate change. We work across all levels of complexity, from genes to whole organisms, and in natural to modified ecosystems.

Why do a research degree in Biology & Environmental Science?

Work with our experts to:

• Solve problems that matter to this and future generations• Assist both developed and developing countries• Learn advanced laboratory skills and undertake fieldwork in diverse locations• Access the latest equipment in state-of-the-art laboratories• Deploy cutting-edge technologies in sensing, artificial intelligence and computer

modelling• Train with experts who are recognised internationally for their achievements• Connect with a range of end-users and potential employers, from community

groups to multi-national companies

Our research teams are working across three major domains which aim to:

Food:• develop crops that are resilient to climate change, pests and diseases• monitor and control the threat of invasive species• enhance the nutritional value of staple foods in developing countries• deliver advanced and sustainable methods for agricultural production

Environment:• build and maintain resilient landscapes• ensure the health and security of our groundwater supplies• help reduce greenhouse gas emissions• monitor, manage, conserve and restore biodiversity and ecosystems• understand the genetic basis of evolution and biodiversity in modern species

Biotechnology:• Process industrial and agricultural waste to generate animal feed and other

commodities• Use plants and other biological organisms to generate novel drugs and chemicals• Diagnose, prevent and treat animal diseases• Develop novel biosensors and biological switches

Page 3: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

Testimonials

Help communities make sustainable decisions

‘My PhD research will help improve our understanding of groundwater resources at Tamborine Mountain in Queensland.

This will give the local community and government the information they need to monitor and manage water resources, and to help maintain this beautiful location sustainably into the future’.

- Lisa Bagger Gurieff, QUT PhD researcher (Principal Supervisor: Dr Lucy Reading)

World-renowned researchers as mentors

'My research explores how a native Australian plant can be used for pharmaceutical applications like the production of antibodies and vaccines.

QUT was an obvious choice for a research degree because of their proven reputation for producing ground-breaking research and technologies that are used by scientists worldwide.

The senior scientific staff have given me guidance and mentorship, and the freedom that I need to progress as a scientist.'

- Zach LeBlanc, QUT PhD researcher (Principal Supervisor: Prof Peter Waterhouse)

Page 4: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONSenior Lecturer

RESEARCHAndrew Baker is an ecologist and holds the position of Senior Lecturer at the Queensland University of Technology in Brisbane where he teaches ecology and environmental science at all levels of the undergraduate program. Andrew has expertise in mammal ecology, taxonomy and genetics, most specifically in carnivorous marsupial research focusing on antechinus. He holds an adjunct / honorary position as Senior Research Fellow at the Qld Museum, where he assists with research, identification and curation of specimens held in the mammal collection.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• None at present.

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/am.baker

ANDREW BAKER

CONTACTPHONE: +61 7 3138 4443EMAIL: [email protected]: GP, R Block, Rm. 320

POSITIONProfessor

RESEARCHProfessor Kirill Alexandrov obtained his PhD in Cell Biology at EMBL Heidelberg, Germany in 1995. He went on to postgraduate work at the Department of Physical Biochemistry at the Max-Planck Institute in Dortmund, Germany, and remained with the Institute for 12 years, becoming a group leader in 1999. He co-founded the German biotechnology company JenaBioscience in 1998 and the UK/Australian SynBio company Molecular Warehouse Ltd in 2015. He joined the Institute for Molecular Bioscience and the Australian Institute for Bioengineering and Biotechnology of the University of Queensland, Australia in 2008 as an Australian Research Council Future Fellow. In 2018 he joined Queensland University of Technology as CSIRO-QUT Inaugural Professor of Synthetic Biology. His group is interested in protein engineering of artificial sensing and signal transduction and two-way connectivity between biology and electronics.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Protein nanocage disassembly using light-responsive unnatural

amino acids (Hons, Masters)• Just add water to make life! Engineering dry cell-free

expression systems to fight viruses and bio-terrorism (Masters, PhD)

• Using in vitro evolution to design next generation macrocyclic cellular probes (PhD)

• Engineering protein-based molecular switches for diagnostic and biosecurity applications (PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/kirill.alexandrov

KIRILL ALEXANDROV

CONTACTPHONE: +61 7 3138 8600EMAIL: [email protected] OFFICE: GP, M Block, Rm. 582

Page 5: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONPostdoctoral Research Fellow

RESEARCHJames has recently joined QUT after several years working abroad in academia and industry, focused on trying to use synthetic biology to solve problems. His main interest is developing biological methods for using or upcycling seemingly unusable industrial waste products.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Better bugs: CRISPR-based modification of unconventional

bacteria to make them easier to engineer (Hons, Masters)• Pumped up protein production: Engineering bacteria for better

production and secretion of extracellular enzymes (Hons, Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/james.behrendorff

JAMES BEHRENDORFF

CONTACTPHONE: +61 7 0498 948 596EMAIL: [email protected]: GP, M Block, Level 5

POSITIONPostdoctoral Research Fellow, Program Leader, Centre for Agriculture and the Bioeconomy

RESEARCHIn our team we focus on developing plants/crops with enhanced characteristics using genetic engineering, genome editing and new plant breeding techniques. Our current projects include -investigating wild native plants in Australia and using genomic approaches for studying crop evolution and adaptation -developing multipurpose Nicotiana crops for molecular farming and use as biofactory - using trans-kingdom RNAi to improve plant resistance to pest and diseases - working on RNA interference, studying production, regulation and movement of sRNAs in Plants.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Developing novel technologies to give effective plant protection

against important agricultural pests, without affecting the environment, such as new delivery strategy for trans-kingdom RNAi. (Masters, PhD)

• Humanised glycosylation pathway engineering in chloroplasts of higher plants. (Masters, PhD)

• Plant biofactory systems for recombinant protein production. (Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/Julia.bally

JULIABALLY

CONTACTPHONE: +61 7 3138 7670EMAIL: [email protected]: GP, H Block, Rm. 1M02

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POSITIONResearch Associate

RESEARCHSustainable Agriculture, predictive modelling, spatial and temporal variability, Digital Agriculture, Climate Change, soil science, Nitrogen and Carbon cycling, Greenhouse gas emissions, Fertiliser use efficiency.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Digital soil mapping application for the strategical management

of nitrogen fertiliser• Cropland mapping using satellite images and AI• Spatial management of soil organic amendments application

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/d.derosa

DANIELEDE ROSA

CONTACTPHONE: +61 7 3138 0256EMAIL: [email protected]: GP, P Block, Level 703-24

POSITIONProfessor and Chair of Fruit Fly Biology and Management

RESEARCHMy lab researches the biology and ecology of tephritid fruit flies, which are internationally important pests of fruit and vegetables. We use tools and approaches from molecular biology, evolutionary biology, autecology and behaviour to develop environmentally and ecologically sustainable control tools for these pests. As fruit flies are also highly biodiverse members of rainforests, we also focus on the multitrophic interactions between flies, the fruits they feed within, and their natural enemies within their natural ecosystems.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• None available for 2021.

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/a.clarke

ANTHONY CLARKE

CONTACTPHONE: +61 7 3138 1649EMAIL: [email protected]: GP, R Block, Rm. 113

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MELODYDE LAAT

CONTACTPHONE: +61 7 3138 1618EMAIL: [email protected]: GP, R Block, Rm. 407

POSITIONSenior Lecturer

RESEARCHOur team is trying to develop novel, efficacious medications for animal metabolic diseases. We study the endocrine system and associated sequelae of metabolic diseases in animals.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Can fructosamine be used to predict equine metabolic

syndrome in horses? (Hons)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/melody.delaat

FELIPEFENSELAU DE FELIPPESCONTACTPHONE: +61 7 3138 7670EMAIL: [email protected]: GP. H Block, Rm 407

POSITIONSenior Research Associate

RESEARCHThe decision of how, when and where genes are expressed is an essential aspect of life. Studying the mechanisms regulating gene expression is therefore fundamental to better understand how organisms develop and answer to external stimuli. I am mainly interested in the regulation mediated by small RNAs, also referred as gene silencing. Gene silencing is key for the proper plant development and physiology and is also one of the main defencemechanisms against virus. Expanding our knowledge of how this pathway works will allow for new and improved strategies to manipulate gene expression, resulting in plants with better agricultural traits

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Mechanisms and applications of sRNA-mediated gene

silencing in plants (Master, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/felipe.felippes

Page 8: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

JOHANNES FRIEDL

CONTACTPHONE: +61 7 3138 9555EMAIL: [email protected]: GP, P Block, Rm. 703A

POSITIONResearch Fellow (Environmental Science)

RESEARCHMy research focusses on carbon and nitrogen cycling in agricultural soils, using stable isotopes to link the production and consumption of reactive nitrogen species in the soil to the underlying microbial processes. This research is embedded in the development and evaluation of sustainable farming practice adapted to global climate change, reducing reactive nitrogen losses to the environment while maintaining crop and pasture productivity.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Denitrification losses from Australian cropping soils - key

drivers and mitigation (PhD)• Nitrogen Turnover and loss in Australian cropping soils

(Hons/Masters)• Denitrification losses from intensively managed agricultural

soils – automated sub-diurnal measurements of N₂ and N₂O using an in-situ continuous flow isotope ratio mass spectrometer (Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/johannes.friedl

POSITIONProfessor

RESEARCHFrom grasslands to tropical forests: understanding the implications of pervasive environmental change on plant populations, plant communities and local people. I am a restoration ecologist who specializes in studying ecological theory and then linking these theoretical constructs to the practical management of grasslands and tropical forests. The driving motivation in my Academic career is to find smarter, cheaper and more sustainable ways of restoring degraded plant communities, whether that be grasslands or forests. Globally, unsustainable land use has led to the degradation of many valuable ecosystems and the loss of irreplaceable biodiversity. My research and the research of my HDR students focuses on developing a better understanding of how the loss of native biodiversity impacts on ecosystems and subsequently finding better ways to bring it back.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• ARC Discovery 2019: Managing complex networks in

endangered grasslands to restore food webs focus on invertebrates (PhD)

• Management of native grasslands in the Bunya Mountains and surrounding lowlands, under a range of anthropogenic pressures, (PhD, Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/Jennifer.firn

JENNIFER FIRN

CONTACTPHONE: +61 7 3138 9016EMAIL: [email protected]: GP, R Block, Rm. 111

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PETERGRACECONTACTPHONE: +61 7 3138 9283EMAIL: [email protected]: GP, P Block, Rm. 731

POSITIONProfessor of Global Change

RESEARCHTerrestrial biogeochemist specialising in soil-plant-atmosphere interactions and the carbon, nitrogen and water cycles. Using stable isotopes and simulation model to develop innovative solutions to increasing nitrogen use efficiency and soil carbon storage and reducing greenhouse gas emissions in agricultural soils.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Reducing nitrogen losses to increase fertiliser use efficiency in

grain systems of Queensland (PhD).• Increasing soil carbon in grazing lands of Qld (PhD).• Impact of conservation agriculture on soil carbon storage in

tropical crops (PhD).

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/pr.grace

SUSANFULLER

CONTACTPHONE: +61 7 3138 2497EMAIL: [email protected]: GP, R Block, Rm. 408

POSITIONAssociate Professor (Ecology)

RESEARCHLarge areas of Australia are experiencing sustained anthropogenic pressure, environmental degradation and biodiversity loss. I am passionate about protecting our ecosystems and biodiversity using interdisciplinary and innovative technological approaches in ecological research. I have a particular interest in using ecoacoustic innovations to monitor changes in ecosystem health and impacts on biodiversity.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Characterising the effect of the lunar cycle on soundscapes.

(BSc Hons, Masters)• Acoustic monitoring of Powerful Owls – how good is the

species distribution model? (BSc Hons, Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/s.fuller

Page 10: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONProfessor, Centre for Agriculture and the Bioeconomy

RESEARCHMy research interests lie mainly in the area of banana biotechnology. The Banana Biotechnology Research Program is probably the leading banana biotechnology program internationally. The program has extensive sub-programs including (i) tissue culture and transformation (ii) transgene expression (iii) gene editing (iv) genomics and gene discovery and (v) disease resistance. The major research projects include (i) banana biofortification for Africa (funded by the Bill & Melinda Gates Foundation) (ii) virus resistant bananas for Africa (funded by the Gates Foundation) (iii) Fusarium wilt TR4 resistant Cavendish (genetically modified and gene edited) and (iv) enhanced banana fruit composition (vitamins, antioxidants).

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Increasing banana transformation efficiency (PhD)• Banana genomics (PhD)• Banana biofortification (PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/r.harding

ROBHARDING

CONTACTPHONE: +61 7 3138 1370EMAIL: [email protected]: GP, H Block, Rm. 302

POSITIONAssociate Professor (Ecology)

RESEARCHGlobal Biodiversity is in crisis worldwide, with losses in biodiversity occurring at 1,000 times the estimated background rate of extinction. Biodiversity declines in Australia are amongst the worst in the world. I work with colleagues across disciplines to address major global questions in conservation. With projects across Australia and the world, we have developed leading edge methods using drones and artificial intelligence to rapidly and automatically detect and monitor wildlife and vegetation. Species we are looking at include koalas, deer, to contribute to monitoring at a landscape scale.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Detection and landscape assessment of multiple species using

drone surveys (BSc Hons, Masters, PhD)• Post bushfire monitoring of threatened and feral species

(Masters, PhD)• Looking through a Virtual Forest (Masters, PhD)• Assessment of Greater Glider populations (Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/g.hamilton

GRANT HAMILTON

CONTACTPHONE: +61 7 3138 2318EMAIL: [email protected]: GP, R Block, Rm. 329

Page 11: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONAssociate Professor, Program leader (BioAg), Centre for Agriculture and the Bioeconomy

RESEARCHWe study the interactions between microorganisms, invertebrates and the environment, particularly agricultural crops. We work with industry to find solutions to critical problems in agriculture and the development and production of microbial inocula and biopesticides. We use molecular and bioinformatic analyses to investigate the ecology and biology of invertebrate, plant and soil microbiota and the health of pollinators

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• SCB500 Work Integrated learning, Summer semester

2020/21: microbe and invertebrate interactions.

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/caroline.hauxwell

CAROLINE HAUXWELL

CONTACTPHONE: +61 7 3138 8062 EMAIL: [email protected]: GP, M Block, Rm 580

POSITIONSenior Lecturer

RESEARCHMark Harrison is a biochemist with extensive basic, applied, and commercial research experience. He is a Senior Research Fellow and foundation member of the QUT Centre for Agriculture and the Bioeconomy (https://www.qut.edu.au/research/centre-for-agriculture-and-the-bioeconomy). Mark also provides consulting services to the Australian food and bio-industrial sector. Research in his group is focused on the conversion of agricultural wastes and residues into more valuable food, feed, fibre, fine chemical, and fuel products using both chemical and biological processes.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Development of analytical tools for microbial adhesion to

lignocellulosic biomass (VRES, Hons, Masters, PhD)• Investigating the mechanical properties of temperate, sub-

tropical, and tropical fodder (VRES, Hons, Masters)• Evaluating the functional response of the rumen microbiome to

low-quality fodder (Masters, PhD)• Microbial colonisation of low-quality fodder particles in the

bovine rumen: meta-genomics, -transcriptomics, and -proteomics (Masters, PhD)

• Near- and super-critical extraction of high value agricultural,• pharmaceutical, and nutraceutical compounds (Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/md.harrison

MARK HARRISON

CONTACTPHONE: +61 7 3138 1234EMAIL: [email protected]: GP, H Block, Rm. 208

Page 12: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

STUART PARSONS

CONTACTPHONE: +61 7 3138 3824EMAIL: [email protected]: GP, R Block, Rm. 304

POSITIONProfessor and Head of School

RESEARCHI study how animals sense the world around them, and how this affects their behaviour. I am particularly interested in bats, but have also worked with birds, insects and whales. Much of my work has focused on studying how bats use echolocation to sense the world around them, how we can use AI to identify the species emitting these calls, and how we can use acoustics to study bat behaviour. This has led to research work around the world; I currently have research programs running in New Zealand, Australia, Belize and Taiwan.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Dispersal patterns of bats in fragmented and continuous

habitats as determined using least cost modeling (PhD)(Masters)

• Bat roosts as nutrient hotspots in native forest (BSc Hons, Masters)

• Using species distribution modelling to understand flying fox roost selection (BSc Hons)

• Behavioral ecology of Australia’s iconic ghost bat (PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/stuart.parsons

POSITIONSenior Lecturer

RESEARCHStemming from a background in molecular ecology, I have interests in using genetics to answer ecological questions, mostly relating to aquatic systems. This has expanded to: using a genetic/genomics approach to improving aquaculture; using environmental DNA (eDNA) technology for conserving and managing Australia's depauperate freshwater biodiversity; using genomics to investigate the evolution of freshwater species (i.e. how they evolved from marine ancestors). I am also interested in applying these technologies to addressing ecological issues in terrestrial systems.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Using eDNA analysis to compare diets between native and

feral herbivores in an arid habitat (Hons, Masters)• Testing expression of speciation genes in a species complex of

FW shrimp (Hons, Masters)• Using an epigenetics approach to determining underlying

mechanisms driving morphological differences in the giant freshwater prawn (PhD)

• Using eDNA to characterise soil bacterial communities associated with decomposing bodies (Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/d.hurwood

DAVID HURWOOD

CONTACTPHONE: +61 7 3138 5072EMAIL: [email protected]: GP, R Block, Rm. 411

Page 13: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONSenior Lecturer (Genomics)

RESEARCHMy current research employs a combination of high throughput genomics, bioinformatics and ecological experiments to address questions in human dominated and marine ecosystems. The questions I am currently investigating include the evolutionary genetics of sea anemones, understanding the genetic underpinnings of flowering time and plant architecture in crops and how plant derived lures influence gene expression and fitness in true fruit flies.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Characterising toxins in sea anemones (PhD, Masters)• Genomics of fruit tree species (BSc Hons, Masters)• Understanding lure response if pest fruit flies (PhD, Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/p.prentis

PETER PRENTIS

CONTACTPHONE: +61 7 3138 2186EMAIL: [email protected]: GP, R Block, Rm. 409

POSITIONAssociate Professor (Evolutionary Biology)

RESEARCHMuch of my earlier research focused on developing phylogenetic methods to resolve evolutionary relationships, usually among mammals or birds. Although I continue this work, my research now primarily involves using molecular and morphological phylogeny to infer macroevolutionary patterns and processes. I am particularly interested in integrating data from DNA sequences, ecology and fossils to better understand the origins and maintenance of mammalian biodiversity. Other long-term interests include inferring how dinosaurs and their extinction influenced the evolution of birds and mammals and understanding evolutionarily stable niche discontinuities between species and their impact on evolvability.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Why "living fossil" species just won't go extinct (Hons, Masters,

PhD)• Maintenance of biodiversity among marsupials (Masters, PhD)• Evolutionary origin of religion (this is just a possibility that would

need additional supervision) (Hons, Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/m9.phillips

MATTHEW PHILLIPSCONTACTPHONE: +61 7 3138 4805EMAIL: [email protected]: GP, R Block, Rm. 117

Page 14: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

DAVID ROWLINGS

CONTACTPHONE: +61 7 3138 9508EMAIL: [email protected]: GP, P Block, Rm. 703

POSITIONAssociate Professor (Environmental Science)

RESEARCHDavid specializes in the development and utilization of improved sensing and monitoring technologies for mitigating environmental greenhouse gases, improving crop fertiliser-use efficiency and monitoring soil carbon, reactive nitrogen and biogeochemical processes. His work spans the Australian beef, dairy, grains, sugar and horticulture industries and he has worked internationally in cropping and rice systems.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Grazing impacts on soil carbon sequestration in rangelands• Using agricultural waste and organic amendments for

sustainable agriculture and soil health.• Testing noval fertiliser formulations for improved environmental

and agronomic outcomes.• Quantifying Nitrogen turnover and release in Australian

cropping soils using novel 15N isotope techniques.

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/d.rowlings

LUCY READING

CONTACTPHONE: +61 7 3138 1469EMAIL: [email protected]: GP, R Block, Rm. 312

POSITIONSenior Lecturer

RESEARCHI research the movement of water and chemicals under the ground. Water stored under the ground, called “groundwater”, is often poorly understood because we can’t see it. Yet groundwater provides an essential freshwater resource for many communities, particularly during times of drought.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Modelling contaminant transport from groundwater to surface

water in the GBR catchments (PhD).• Modelling groundwater-surface water interactions at

Springbrook (PhD)• Development of a medical device for the early detection and

monitoring of equine laminitis (Hons)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/lucy.reading

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POSITIONProfessor

RESEARCHProf Sillence trained in pharmacology before undertaking a PhD in animal physiology and nutrition. He as worked in the UK, the USA and in Australia to research animal production and health, studying a range of hormones and diseases. His current focus is on the hormones that influence equine laminitis, a foot disease of horses, and the relation of this condition to human metabolic syndrome.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Development of a medical device for the early detection and

monitoring of equine laminitis (Honours project)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/martin.sillence

MARTIN SILLENCECONTACTPHONE: +61 7 3138 2565EMAIL: [email protected]: GP, R Block, Rm. 312

POSITIONResearch Fellow (Proteomics)

RESEARCHStudying proteins and small molecules as dynamic entities that continuously undergo modification, conversion or relocation to explore the significance of these alterations for living organisms using high throughout approaches. Specifically, applying cutting edge quantitative mass spectrometry techniques to investigate the dynamics of proteomes and metabolomes of species of economic importance.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Cross species plasma proteomics (BSc Hons, Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/pawel.sadowski

PAWEL SADOWSKI

CONTACTPHONE: +61 7 3138 9541EMAIL: [email protected]: GP, P Block, Rm. 632

Page 16: QUT Biology and Environmental Science potential research ... · Research in Biology & Environmental Science at QUT Our school brings together multidisciplinary research teams to address

POSITIONResearch Fellow

RESEARCHCurrently focused on bioconversion of agro-industrial residues and using various carbon and nitrogen sources yeast and fungal nutritional supplements for feed or food. I have a strong interest in hyphae and mycoprotein synthesis in solid-state and submerged fermentation. I am particularly interested in fungi with regards to residue transformation and the production of chitin, protein and fatty acids, medicinal compound as well enzymatic catalysis. Interested in halophilic methanotrophs for methane abatement and improved lysine synthesis in co-co-culture.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Producing mushrooms, mycelial proteins and medicinal

compounds from waste (Hons, Masters, PhD)• Biological engineering of waste into new composite materials

and fungal leather (Hons, Masters, PhD)• Hyper-accumulation of lipids and dietary fatty acids in microbial

cell cultures (Hons, Masters, PhD)• Using a robust methanotroph culture to mitigate atmospheric

methane release (Hons, Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/james.strong

JAMES STRONG

CONTACTPHONE: +61 7 0459 652 099EMAIL: OFFICE: GP, H Block, Rm. 208

POSITIONProfessor

RESEARCHWe are a multi-disciplinary group working to develop and engineer microbial and enzyme systems for industrial applications. Areas of current focus are the development and manufacturing optimisation of advanced microbial livestock feed supplements, livestock waste processing, chemical manufacturing, textile waste processing and textile industry innovation. These industry focused projects are built on our interests in understanding and manipulating/optimising enzyme function, microbial production strains and fermentation processes and how these systems interface with business, the economy and the environment.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Production bottlenecks in the yeast Pichia pastoris: functional

studies of stress responses during recombinant protein expression (PhD)

• Metabolic engineering of methanotrophic bacteria to produce high-value compounds (Hons, Masters, PhD)

• Microbial cellulose synthesis, modification and elongation using engineered biology (Hons, Masters, PhD)

• Engineered microbial catalysts for the production of human and veterinary medicines (Hons, Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/robert.speight

ROBERT SPEIGHT

CONTACTPHONE: +61 7 3138 0373EMAIL: [email protected]: GP, P Block, Rm. 727

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POSITIONLaureate Fellow & Professor of Molecular Genetics

RESEARCHMy past research started with molecular virology and has flowed through, the creation of naive antibody libraries by molecular shuffling, discovering, studying and applying RNAi interference, delving into epigenetics, protecting plants against insects, and is now more focussed on plant genomics and genome editing. I am currently investigating the evolution and utilisation of the Australian native plant Nicotiana benthamiana, which has become a world-wide biofactory for the production of vaccines and valuable proteins. We are trying to understand the harmony that exists between genes of the two sub-genomes of this polyploid plant and how we can develop ways to generate accelerated evolution through editing, mobilising, rewriting, and recombining genes and gene blocks.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• • Accelerating Evolution by genome shuffling (PhD, Masters)• • Rewriting the genome and epigenome (PhD, Masters)• • Vertical Biopharming (BSc Hons, Masters)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/peter.waterhouse

PETER WATERHOUSE

CONTACTPHONE: +61 7 3138 7793EMAIL: [email protected]: GP, H Block, Rm. 310

POSITIONAssociate Professor (Microbiotechnology)

RESEARCHI am interested in studying and understanding the underpinning fundamental mechanisms how model and non-model microorganisms and enzymes can biodegrade and/or bioconvertdifferent waste and environmentally hazardous materials such as biomass, plastics waste, persistent organic pollutants (e.g. PCBs, PFAs, etc), into neutral compounds, and/or intermediate products that can be recycled to make new material/bioproducts. My research also looks at molecular processes into creating recombinant microbes or GMOs, that can express and produce a protein/enzyme of interest at high levels, and then be able to perform and optimize fermentation conditions from laboratory scale (0.001 - 20L) up to industry scale (≥100L). Also interested in studying the structural, functional and biochemical properties of proteins/enzymes of interest with a focus, on different industrial applications.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:• Testing of a range of thermophilic bacteria from the Australian

Great Artesian Basin for activity on different types of plastics (Masters, PhD)

• Expression and testing of different enzymes against different plastics (Masters, PhD)

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/junior.teo

JUNIORTE’O

CONTACTPHONE: +61 7 3138 1687EMAIL: [email protected]: GP, R Block, Rm. 405

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POSITIONSenior Research Fellow, Centre for Agriculture and the Bioeconomy

RESEARCHMy research is focused on understanding the molecular mechanisms that drive plant stress responses to inclement environments and pathogens. In todays’ increasingly unpredictable climates and disease outbreaks, plant stress response pathways are becoming increasingly relevant for the sustainability of not just crops but all plant life. Using a multi-disciplinary and trans-institutional approach, my research harnesses the unique tolerance strategies of naturally resilient ‘resurrection plants’ to unravel the mechanics of plant stress tolerance. Outcomes of my research are important for the improvement of crops that can continue to yield even in unfavourable environments.

RESEARCH STUDENT PROJECTS AVAILABLE 2021:None currently offered

QUT STAFF PROFILE:https://staff.qut.edu.au/staff/b.williams

BRETT WILLIAMS

CONTACTPHONE: +61 7 3138 1696EMAIL: [email protected]: GP, H Block, Rm. 301