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Research on MRSA in animals: past, present and future Luca Guardabassi Associate Professor in Clinical Microbiology DVM, PhD, Diplomate ECVPH

Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

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Page 1: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Research on MRSA in animals: past, present and futureLuca GuardabassiAssociate Professor in Clinical MicrobiologyDVM, PhD, Diplomate ECVPH

Page 2: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

This is not a review lecture!

If you look for an excellent review on MRSA in animals:

Page 3: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Talk overview

Publications

on

MRSA in animals

Origin

of

FA-MRSA ST398

Genetic

diversity

of

FA-MRSA

FA-MRSA vs

MRSA in companion

animals

MRSP

Future

research

Page 4: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Publications on MRSA in animals ranked by year (total = 106) Web of Science® accessed 20 April 2009

0

5

10

15

20

25

30

1972 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009

First isolation of MRSA from cows

First isolation of MRSA from pets

First isolation of MRSA from horses

First isolation of MRSA from pigs

Page 5: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Publications on MRSA in animals ranked by country (top 10) Web of Science® accessed 20 April 2009

0

5

10

15

20

25

Netherl

ands

Canad

aGerm

any

United K

ingdom

United Stat

esDen

mark Italy

Belgium

KoreaJa

panSwitz

erlan

dOther

Page 6: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Publications on MRSA in animals ranked by type of study Web of Science® accessed 20 April 2009

Prevalence inanimalsDetection in animals

Human carriage

Genotypic analysis

Review

Animal infection

Human infection

Case-control study

Methods foridentificationEradication

Page 7: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

0123456789

10

2009 2008 2007 2006 2005 2004 2003 1999 1997 1995 1994 1972

Pets Horses Livestock Food Other

Publications on MRSA in animals ranked by animal host Web of Science® accessed 20 April 2009

Page 8: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

What is the origin of the FA-MRSA clone ST398?

Page 9: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

CC9

CC398

CC30

Page 10: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Other information on S. aureus in pigs

From Devriese

1984. J. Applied

Bacteriol. 56, 215-220

Old

studies by Hajek

et al. (1970s) and Devriese

(1984) indicated

that

porcine

S. aureus

form a heterogenic

population•

3 major biotypes/ecovars

were

described

by Devriese

CC30CC9

CC30?

MLST

CC12

CC1/97?

Page 11: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

S. aureus ST398 is likely to have pig origin but failure to detect the clone in the old Devriese collection suggests that it could be absent or low-prevalent in pigs in the 1970s.

Take-home message:

Page 12: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

What is the diversity of FA-MRSA?

Page 13: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Marked geographical

differences in the distribution of

spa types:

• t011 and t108 predominant

in NL• t034 predominant

in DK

High

diversity

in SCCmec types (mainly

type IV, IVa

and V) frequent

associated

with

spa types

• t011 often

contains

SCCmec

type IV and IVa• t108

often

contains

SCCmec

type V

FA-MRSA are

currently

typed

by MLST and spa typing

but we

do not know

the

discriminatory

power of

these

methods

within

this

S. aureus lineage

Facts on diversity and evolution of CC398

Page 14: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic
Page 15: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic
Page 16: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA ST9 from pig carcasses in Hong Kong: a new MRSA clone associated with pigs? Guardabassi et al. unpublished

Isolate Sampling date Resistance pattern spa SCCmec PFGE

K1 22 Feb 2008 3 t899 IVb A

G29 11 Mar 2008 4 t899 IVb B

55 27 Mar 2008 1 t899 IVb A

56 1 t899 V C

57 1 t899 V C

61 1 t899 V C

54 1 t899 V F

B40 15 April 2008 1 t899 IVb A

B46 1 t899 IVb A

B50 1 t899 IVb A

B51 1 t899 IVb A

B52 1 t899 IVb A

B22 1 t899 V C

B39 1 t899 IVb D

B37 2 t899 IVb B

B36 2 t899 IVb E

Resistance patterns:1: TE, C, CN, DA, E, CIP, SXT2: TE, C, DA, E, CIP, FD3: TE, C, CN, DA, E, CIP,

SXT, FD4: TE, C, DA, E, CIP,

SXT, FD

MRSA ST9 t899 was isolated the nasal cavity of 16% pig carcasses

Page 17: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA ST9: a new MRSA clone associated with pig farming? Guardabassi et al. unpublished

Tandem repeat successions in spa types associated with ST9 and ST398

spa type

Tandem repeat sequence MLST allelic profile

ST

t899 07-16-23-----------------02-34 3-3-1-1-1-1-10 9t337 07-16-23-23-02-12-23-02-34 3-3-1-1-1-1-10 9t3198 07-16-16-23-23-02-02-12-23-02-34 3-3-1-1-1-1-10 9t011 08-16-02---------25-34-24-25 3-35-19-2-20-26-39 398t034 08-16-02-25-02-25-34-24-25 3-35-19-2-20-26-39 398t0108 08-16-02---------25-----24-25 3-35-19-2-20-26-39 398t567 08-------------02-25-----24-25 3-35-19-2-20-26-39 398t571 08-16-02-25-02-25-34-----25 3-35-19-2-20-26-39 398

Page 18: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Transmission of methicillin-resistant Staphylococcus aureus strains between different kinds of pig farms. Van Duijkeren et al. 2007

Page 19: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Prevalence of methicillin-resistant Staphylococcus aureus among veterinarians: an international study Wulf et al. 2008. Clin. Microbiol. Infect. 14: 29-34

Page 20: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA ST398 epidemiology in Holland van Loo

et al. 2007 Emerg. Infect. Dis.

Page 21: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

FA-MRSA ST398 is likely to have acquired SCCmec in distinct locations and geographical dispersal could be limited. While we are studying FA-MRSA ST398, other FA-MRSA clones are emerging in livestock.

Take-home message:

Page 22: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

What are the differences between FA-MRSA and MRSA in companion animals?

Page 23: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA clones in animals

CC22 (ST22)Clone in pets (human origin)

CC398 (ST398)Clone in livestock (animal origin)

CC8 (ST8 and ST254)Clone in horses (human origin)

Page 24: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Epidemiology of FA-MRSA Current assumption: zoonosis

Page 25: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Evidence that FA-MRSA is a zoonotic agent

1. Human infections have been reported in farmers

and their family members in various countries

2. FA-MRSA carriage is significantly higher in

farmers and veterinarians than in the community

3. The specific FA-MRSA clone (ST398) was unknown

in human medicine prior to its recent emergence

in livestock

Page 26: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA ST398 epidemiology in Holland van Loo

et al. 2007 Emerg. Infect. Dis.

Page 27: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Controversial aspects:

1. The FA-MRSA clone CC398 does not seem to be

particularly virulent – low morbidity/mortality in

humans

2. Cases of human infections have been reported in

Sweden, a country with low prevalence of FA-

MRSA in pigs, among individuals without contact

to animals

3. In Denmark, exposure to pets, horses and cattle

(but not to pigs) has been shown to be a

significant risk factors for FA-MRSA carriage in

vets (Moodley et al. 2008)

Page 28: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Epidemiology of MRSA in companion animals Current assumption: antrhopozoonosis

Page 29: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Evidence that MRSA in companion animals is an anthropozoonotic agent

1. The MRSA clones emerged in companion animals

have been known for many years in human

medicine

2. S. aureus is not a normal commensal in dogs and

cats (<20% are colonized by MSSA)

3. MRSA carriage in companion animals is usually

transient

Page 30: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Controversial aspects:

1. MRSA occurring in animals are highly pathogenic to

man, certainly more pathogenic than FA-MRSA

ST22 (EMRSA-15) is the most common cause of MRSA

bacteremia in the UK

ST8 (US300 or CA-MRSA-5) is the dominant CA-MRSA

clone in the USA

2. Human infection linked to MRSA carriage in

companion animals have been reported among

owners (Manian et al. 2003) and veterinary staff

(Weese et al. 2006)

3. High MRSA carriage rates are found in veterinarians

working with companion animals

Page 31: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSA prevalence in people exposed to animals Weese

& van Duijkeren. 2009 Vet

Microbiol.

Page 32: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

PFGE sma

100

50

PFGE sma

63

64

58

57

65

66

67

61

60

59

62

54

55

56

North

North

West

West

North

North

North

East

East

East

East

South West

South West

South West

t064

t064

t064

t064

t451

t451

t451

t032

t749

t032

t032

t032

t032

t032

CC8

CC8

CC8

CC8

CC8

CC8

CC8

CC22

CC22

CC22

CC22

CC22

CC22

CC22

B3

B3

B1

B1

B2

B2

B2

A1

A1

A1

A1

A1

A1

A1

Human

Human

Equine

Human

Equine

Equine

Equine

Canine

Human

Human

Canine

Human

Canine

Canine

Molecular typing of MRSA from companion animals and veterinarians in the UK and Ireland Moodley et al. 2006, J. Antimicrob. Chemother.

Page 33: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Independent of their origin, some MRSA clones (namely CC398, CC8 and CC22) are able to transfer between hosts. Such clones have clearly acquired the capacity to adapt to different hosts and should be regarded as ”extended host-spectrum MRSA clones”.

Take-home message:

Page 34: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

What is MRSP and why is it an emerging problem in veterinary medicine?

Page 35: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

ethicillin

What is MRSP?

RSP

esistant

taphylococcusseudintermedius

It is a S. pseudintermedius resistant

to all β-lactams (penicillins & cephalosporins)

It is called

methicillin-resistant

because

the gene involved (mecA) is the same as in MRSA

• As MRSA it is generally

multi-resistant

and spreads

clonally

• Often

occurs

in the form of hospital outbreaks

M

Page 36: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

<Udfyld sidefod-oplysninger

her>

How frequent are MRSP in small animals?

Reported

for the first

time in Brasil in 1998

MRSP emerged

in Europe

in 2006 and rapidly

spread in Sweden, Germany, Switzerland, Holland and Italy

In some

areas

of the US, MRSP account

for over 20%

of clinical

isolates

of S. psudintermedius

In Europe, the prevalence

is lower, approximately

5%

in some

countries

Page 37: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Prevalence of resistance in 100 MRSP isolates from 8 countries (CLSI breakpoints) The

MRSP ENTHUSIASTS, unpublished

data

Resistance %Kanamycin 98TMP 95Fluoroquinolones 94Clindamycin 94Gentamicin 92 Sulfonamides 78Tetracyclines 77 Chloramphenicol 70 Fusidic

acid

LinezolidVancomycin

0 00

If you are lucky…

Page 38: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Genetic diversity of in 100 MRSP isolates from 8 countries The MRSP ENTHUSIASTS, unpublished data

Spa type MLST Frequency Countries

t02 71 71% Sweden, Holland, Germany,

Italy, Switzerland, Denmark

t06 68 18% USA, Canada, Holland

Other Other 11%

Page 39: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

MRSP is a true veterinary problem with serious implications for animal health. Probably the most serious resistance problem ever seen among animal pathogens.

Take-home message:

Page 40: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

What is next?

Page 41: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Longitudinal studies at the farm level•

Transient vs. permanent carriage

Transmission and prevalence

within

farms

Epidemiological studies•

Secondary

transmission from farms to the

community

Vertical

vs. horizontal

transmission in animal

production

Identification

of

risk

factors promoting

MRSA in animals

Mathematical

models

Population structure studies•

Understanding

evolution of

FA-MRSA

Genetic studies•

Identification

of

key

factors for host-MRSA

interactions

Mode of

SCCmec

acquisition

There a still a number of questions to be answered and actions to be taken….

Page 42: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

In vitro and in vivo experimental studies•

Assessment

of

host-range

Assessment

of

antimicrobial

effects

New tools•

PCR for rapid identification

of

MSSA/MRSA CC398

PFGE using

non-SmaI

endonuclease

(e.g. XmaI)

Control measures•

Rational antimicrobial

use

Phage

therapy•

Bacterial

antagonism

Farm decontamination•

Vaccination?

Intervention studies, etc,etc…

There a still a number of questions to be answered and actions to be taken….

Page 43: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

We publish a lot of papers on MRSA but many crucial questions are still to be answered. We should try to answer the numerous questions and ultimately to solve problems rather than pointing them out.

Take-home message:

Page 44: Research on MRSA in animals: past, present and future · MRSA in animals • Mathematical models • Population structure studies • Understanding evolution of FA-MRSA • Genetic

Two EU projects on FA-MRSA start in 2009

University Medical Centre Utrecht

University Claude Bernard Lyon

Universidade Nova de Lisboa

Utrecht University

University of Edinburgh

National Medicines Institute

DTU-Food Denmark

University of Amsterdam

Novolytics

http://www.fp7-pilgrim.eu/

Royal Veterinary College UK

Radboud University NL

University of Copenhagen DK

Universtè

Libre de Briussels BE

Erasmus University Medical Center

St. George Medical Schoold UK

National Institute of Public Health NL

Statens Serum Institut DK

Centrum vor Onderzoeg BE

Institute of Chemical Technolgoy CZ

Aguacure

Accelopment

PILGRIM CONCORD

THANK YOU!