Upload
antony-short
View
253
Download
1
Tags:
Embed Size (px)
Citation preview
Single-strand binding proteins
DNA replication, part 2
Table 20.1
Figure 20.19
Stimulation of DNA synthesis by T4 phage SSB,
gp32
amB17(gene23)
tsP7 (gene 32), amB17(gene23)
amE727 (gene 49), tsP7 (gene 32),
Effect of the SSB gene 32
Topoisomerases
Rubber band model of
supercoiling in DNA
Nicking one strand - relaxation of supercoiling
Problem of Strain due to Unwinding of DNA by Helicase is solved by the Swivel Concept
DNA gyrase is a a DNA topisomerase
relaxed
supercoiled
•Topoisomerase II forms a covalent DNA-enzyme intermediate with its Tyr residues
Cyrstal structure of yeast DNA topoisomerase
Model in segment passing in topoisomerase II
DNA polymerases
Proofreading in DNA synthesis
DNA polI
Crystal structure of the Klenow fragment
Purification of DNA polymerases by DEAE sephacel
polA1 strain
Wild type with & w/o N-
ethylmaleimide (blue line)
Separation of polIII core and alpha subunit
Exonuclease activity of the epsilon subunit
Perfectly paired DNA substrate
Imperfectly paired DNA substrate
Termination of DNA replication
Replication Leaves Catenated Daughter Chromosomes
Two-step Model for Decatenation in Prokaryotes
Cozarelli and Colleagues: Topo IV is Responsible for Decatenation in Bacteria
•Studied decatenation of intertwined pBR322 plasmids
•Used ts mutations S. typhimurium; Mutations were in gryA (encodes gyrase), parC and parE (encode two subunitsof topo IV) and parF (unrelated gene linked to parC and E)
•Found mutations only in parC and parE (and not gyrA) prevented decatenation. Therefore, topo IV acts in decatenation.In eukaryotes topo II is the probably the decatenating enzyme.
The problem with replication ofLinear DNA
Telomerase activity on four repeats of TTGGGG
Tetrahymena
Telomeres in the protozooan Tetrahymena
Telomere binding proteins in ciliates and
yeast