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Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

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Page 1: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Statistical Mechanicsand

Evolutionary Theory

Lloyd DemetriusHarvard University, Cambridge, Mass., USA

And

Max Planck Institute, Berlin, Germany

Page 2: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary changes in morphological complexity

a. Ecological time scale (Single evolving lineage)Increases and decreases in adult body size

b. Geological time scale (Phyletic lineages)Increases in mean body size

c. Geological time scale (Clades)Increases in maximum body size

Page 3: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolution of the horse family

Page 4: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Changes in body size within the equid lineages

1. Increase in body size : North America2. Decrease in body size : Europe

Page 5: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Increase in mean body size within the equid taxon

Page 6: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany
Page 7: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Increase in maximum body size over the history of life

Page 8: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Problem

What is the evolutionary basis for the changes in body size over evolutionary time ?

Page 9: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Darwinian argument

Individuals differ in terms of their morphology, behavior and other phenotypic characteristics (variation)

Different phenotypes are characterized by differences in the acquisition and transformation of resources (natural selection)

There exists a correlation between the characteristics of parents and their offspring (heredity)

Page 10: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Darwinian fitness

The efficiency with which organisms transform resources into net offspring production

Page 11: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Levels of biological organization

1. Populational: Changes in the phenotypic composition of a population by a natural selection

2. Phyletic lineage: Changes in the species composition of a lineage by speciation and background extinction

3. Clade: Changes in the species composition of a clade by speciation and mass extinction

Page 12: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Darwinian modelOrganic diversity and changes in complexity can be explained

in terms of the following tenetSelection tenet

Resident type X1 ; Fitness W1

Variant type X2 ; Fitness W2

If W2 > W1 : then X2 replaces X1

FitnessThe efficiency to transform respurces into net-offspring production

X1

X2

Page 13: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Darwin‘s theory

Evolutionary Principle: Evolution by natural selection results in an increase in fitness

Explanatory Power

1. Variation in life history, body size, life span within and between species

2. The adaptation of species to their habitat

3. The changes in morphological complexity over time

Page 14: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Problem

Can Darwin‘s argument be translated into an analytical theory which will explain:

The diversity of species in space and time The adaptation of species to their environment The increase in complexity within lineages

Page 15: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Does there exist a demographic characterization of fitness which will predict the outcome of competition between variants and incumbents in a population of organisms ?

Page 16: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Characterizations ofDarwinian Fitness

Malthusian parameter (1930) Fisher‘s theory

Evolutionary entropy (1974) Directionality theory

Page 17: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The theory of evolution by natural selection

is the doctrine of Malthus applied to plants

and animals.

Darwin (1859)

Page 18: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Demographic model

Population described by d age-classes

bi = Probability of surviving from age-class (i) to age-class (i+1)

mi = Mean number of offspring produced by individual in age-class (i)

lj = b1,b2,...,bj-1 = Survivorship to age-class (j)

Vj = lj mj = Net-reproduction at age j

Page 19: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Malthusian parameter as Darwinian fitness

Matrix Representation of Graph

λr

vAv

log eigenvalue Dominant ,

00

00

00

1

2

1

21

d

d

b

b

b

mmm

A

)()1( tAutu

rtNt

tutN j

)(log1

lim)()(

rate growth Population r

Characterization of r : rj

jV

e1 jjj mlV

Page 20: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Fisher‘s Theory Growth rate r characterizes Darwinian Fitness:

Malthusian Principle: r predicts the outcome of competition between variant and incumbent types

X

r

X*

r*

X X*

0

*:*

Δr

Xrr wins

0

:*

Δr

Xrr wins

r*

r

rj

jV

e1

rrr *

Page 21: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Fisher‘s evolutionary theory

Population growth rate

Mean Fitness

Fisher‘s principle: Evolution by natural selection results in an increase in the mean malthusian parameter

0d

d rV

t

r

ji

ijij prr,

r

rj

jV

e1

Page 22: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The Malthusian Parameter as Darwinian Fitness

Critique

Computational studies: In Competition between mutants and the

resident population the growth rate is not always a good predictor of invasion success

Empirical studies:Invasion success is highly correlated with

body size and is contingent on the resource constraints

Page 23: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Darwin‘s theory of evolution by natural selection is the doctrine of Gibbs, Boltzmann and Clasius applied to plants and animals.

Directionality theory

(1974)

Page 24: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Directionality theory

Evolutionary entropy, S , characterizes Darwinian Fitness

d

jjj ppS

1

log

rj

jj

Vp

e

Page 25: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary principles

1. Evolutionary dynamics within a single evolving lineage(Mutation and Selection)

Directionality Principle for Entropy• Limited Resources: Evolution increases entropy• Variable Resources: Evolution decreases entropy

2. Evolutionary dynamics within a taxon (Speciation and Extinction)

Fundamental Theorem of Evolution• The rate of change of mean entropy is equal to the variance in entropy• Mean entropy increases over geological time

3. Evolutionary dynamics within a a clade ( Speciation, background and mass extinction )

Secondary Theorem of Evolution• The upper entropic limit of species in a clade increases as the claded replaces

another over geological time

Page 26: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Organization

The origin of evolutionary entropy: Its demographic basis

The directionality principles for evolution:Their mathematical basis

Implications of directionality theory for the study of• Life history evolution• Evolution of body size• Evolution of senescence

Page 27: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Origin of evolutionary entropyDemographic model

Microstates:

Population growth rate:

j

j

j

m

l

V

:Fecundity

:ipSurvivorsh

:function vereproducti Net

Rate Growth

r

V

r

rj

j

e1

log

00

00

00

1

2

1

21

d

d

b

b

b

mmm

A

Page 28: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Biological networksMacrostates from microstates

λuAuaA ij 0)(

Theorem

for principle lVariationa λlog

00}{ ijijij app P

j

jijij u

uap

ijijiijiji appp logloglog

Hr

attained is sup the

whichfor matrix unique a exist There

)ˆ(ˆ.2

loglogsuplog.1

ij

ijijijijijij

pP

appp

P

Ann. App. Prob. (1974)

3.

Page 29: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Demographic networksMacrostates from microstates

0100

010

00121

dppp

P

λrV

prj

jj log

e

Entropy:

Reproductive potential:

Generation time:

j

jj

jj

jpT

VpE

ppS

log

log

SErT

T

S

T

Er

00

00

00

1

2

1

21

d

d

b

b

b

mmm

A

Page 30: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Properties of entropy

1. Measure of uncertainty

2. Measure of diversity

3. Measure of robustness

jj ppS logrj

jj

Vp

e

Page 31: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Uncertainty measure

Uncertainty in the age of the mother a randomly chosen newborn

pj Probability that the mother of a randomly chosen newborn belongs to age class (j)

d

jjj ppS

1

log

1,0,,0,0 121 dd pppp 0,,0,0 21 dppp

Page 32: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Robustness

Genealogies: Set of paths of the graphPath:

Matrix associated with the graph

)(1

)(

)(1

lim

...loglog

log

12110

10

nn

nn

xxxxxxn

xx

Sn

P

xSn

aaaS

a

nn

1 32 d......

0)(

),...2,1(...)( 210

ij

i

aA

dxxxx

Page 33: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Robustness

)(1

)( nSn

P nn

.

1)(

than moreby

mean the from differs

nn Sn

Q

)(log

1lim nn

Qn

R

Theorem: 0 RSAnnals. App. Prob.(1994)

Prob. that the sample mean

Page 34: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Reproduction potential and resource constraints

SrTESrTE

SrTE

0;0

Proposition: In Populations in dynamical equilibrium with resource conditions

E<0: Constant resource

E>0: Variable resource

jj VpE log

Page 35: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The Entropic Selection PrincipleEntropy as darwinian fitness

Competition betweem variant and incumbent is a stochastic process determined by entropy (S) and contingent on the resource constraints (E)

Limited resources: (E<0)Mutants with increased entropy have increased robustness and will prevail (a.s)

Variable resources: (E>0)• Large population size:

Mutants with decreased entropy will have decreased robustness and will prevail (a.s)

• Small population size:The outcome of competition will be a stochastic process described by probabilities contigent on population size

Page 36: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

X X*

S

S*

wins Xss :*

X X*

S*S

wins*:* Xss

X XX* X*

SSS*

S*

wins Xss :*wins *:* Xss

Invasion dynamicsEvolutionary entropy predicts the outcome

of competitionLimited Resources

Variable Resources

Page 37: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Predictions of directionality theory

Based on the entropic principes of selection we predict the evolutionary changes at three different levels of biological organization.

1. Single evolving lineage – Mutation and selection

2. Aggregate of phyletic lineages – Speciation and background

extinction

3. An ensemble of clades – Speciation and mass extinction

Page 38: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary dynamics within an evolving lineage

Long run changes in entropy as one population type replaces another under mutation and natural selection

Equilibrium species: Species subject to limited resource conditions

Opportunistic species: Species subject to variable resource conditions

Evolutionary principles: 1. Entropy increases in equilibrium species2. Entropy decreases in opportunistic species

jj ppS log

Page 39: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary dynamics within a taxon

Long run changes in mean entropy as one phyletic lineage replaces another under speciation and background extinction.

The rate of change in mean entropy is equal to variance in entropy

Mean entropy increases

SVdt

Sd

iiSpS

Page 40: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary dynamics within a clade

Long run changes in maximum entropy as one clade replaces another under mass extinction

The upper entropic limit increases as one clade replaces another over

geological time.

)(maxˆiSS

0ˆ S

Page 41: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Main tenets of the evolutionary process

1. Evolutionary dynamics within a single evolving lineage

• Equilibrium species: Entropy increases

• Opportunistic species: Entropy decreases

2. Evolutionary dynamics within a taxonThe rate of change of mean entropy is equal to the

variance in entropy

3. Evolutionary dynamics within a cladeThe upper entropic limit increases as one clade

replaces another

Page 42: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Implications of the evolutionary tenets

Evolution of life history

Evolution of body size

Evolution of senescence

Page 43: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Allometric relations

Body size and physiological timePhysica A.

(2003)Physiological time, Body size

Physiological time1. Cycle time of metabolic processes2. Generation time3. Life span

WT T W

132

Page 44: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Entropy and generation time

Theorem

j

jj

jpT

ppS log

TaS log

constantspecific Taxon a

Page 45: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The evolution and distribution of species body size

rj

jj

jj

Vp

ppS

e

log

WbaS log11

Relation between entropy S

and body size W

Page 46: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Empirical studyRelation between entropy and

body size

Page 47: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Directionality theory predicts evolutionary changes in body size

Changes in body size within a single evolving lineage

Limited resource conditions

Increase in body size Variable resource conditions

Decrease in body size

Page 48: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Changes in body size within the equid lineages

1. Increase in body size : North America2. Decrease in body size : Europe

Page 49: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Directionality theory predicts evolutionary change in body size

within a taxon

The rate of change of the mean body size of species within a phyletic lineage is equal to the species variance in body size

Mean body size increases within a taxon

( Cope‘s Rule )

Page 50: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Increase in mean body size within the equid taxon

Page 51: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Evolutionary changes in the upper limit of bodysize

The upper limit of body size increases as one clade replaces another over geological time.

Page 52: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Changes in the upper limit of body size

Page 53: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The evolution of life span

Evolutionary entropy is analytically related to life span L

Directionality theory predicts species variation in life span

LaS log2

Page 54: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Empirical observationEntropy and life span

Page 55: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

The evolution of senescence

Directionality theory explains variation in the rate of aging between equilibrium and opportunistic species.

Proposition: The intensity of natural selection is a convex function of age

Page 56: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Intensity of natural selection

Page 57: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Conclusion

1. Darwinian Fitness is characterized by evolutionary entropy

2. Diversity of species and evolutionary change in complexity can be described in terms of the following tenets:

a) Population level:Equilibrium species: Entropy increases

Opportunistic species: Entropy decreases

b) Phyletic level:Mean entropy increases

c) Clade:The upper entropic limit increases

Page 58: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Relation between thermodynamic variables and evolutionary parameters

Thermodynamic variables

Free energy,

Thermodynamic entropy,

Temperature,

Mean energy,

Evolutionary parameters

Growth rate,

Demographic rate, Reciprocal generation time,

Reproductive potentialE~

F~

S~

T~ T

r

S

TSr

TSEF

~~~~

Page 59: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Relation between thermodynamic principles and evolutionary principles

Thermodynamic entropy:

Diversity of energy distribution

Demographic entropy:

Diversity of energy flow

The entropic principle for evolution is a non—equilibrium analogue of the entropic principle for physical systems.

jj ppS ~log~~

jj ppS log

Page 60: Statistical Mechanics and Evolutionary Theory Lloyd Demetrius Harvard University, Cambridge, Mass., USA And Max Planck Institute, Berlin, Germany

Relation between thermodynamic principles and evolutionary principles

Thermodynamic entropy:

Demographic entropy:

Analytic relation between generation time, and Temeprature :

Theorem: The entropc principle for thermodynamic systems is the limit of the entropic principle for evolutionary processes.

T

dQSd ~~

dPTdS

T~ T

T

G

Tk

hT ~

*exp~

)0*( G