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STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department of Chemistry Indian Institute of Technology Madras Chennai 600036 [email protected]

STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

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Page 1: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY

S. SANKARARAMAN

Department of Chemistry

Indian Institute of Technology Madras

Chennai 600036

[email protected]

Page 2: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

NOE Difference Spectrum

NOE is defined as the change in the intensity of one spin when the spin

transition of another nuclei is perturbed from equilibrium population

(by saturation or inversion).

Nuclear spin that are coupled through space (due to spatial proximity)

give rise to nuclear Overhauser effect (NOE).

NOE depends on (among various other things) the close proximity of

nuclear spins.

Allows elucidation of three dimensional molecular geometry.

NOE observed for spin (I) when spin (S) is perturbed is given by

I0 is the equilibrium intensity and I is intensity

in the presence of NOE

Page 3: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Method to obtain NOE difference spectrum

Page 4: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

a) Control 1D 1H NMR spectrum

b) and c) NOE difference spectra

Page 5: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

E vs Z geometry in the absence of scalar vicinal coupling

Page 6: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Aromatic substitution pattern

Page 7: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Beilstein J. Org. Chem. 2010, 6, 22. doi:10.3762/bjoc.6.22.

H

NH COOMe

HEtOOC

J = 12.9

J = 4.2

Page 8: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Mosher’s ester for the determination of enantiomeric composition

Enantiotopic protons are isochronous

Diastereotopic protons are anisochronous

Page 9: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

J. Org. Chem., 1969, 34, 2543-2549;

J. Am. Chem. Soc., 1973, 95, 512-519.

R acid chloride + rac alcohol

60 MHz NMR of (+) Mosher’s ester of racemic phenyl-t-butyl carbinol

Inset: Pure (+) isomer ester of (+) phenyl-t-butyl carbinol.

Page 10: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department
Page 11: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Lanthanide shift reagents for stereochemical determination

Paramagnetic lanthanide complexes (Eu, Pr typical) of beta diketones as ligands

Contact shift reagents – needs to coordinate to a basic site in the substrate

Induces large shifts in chemical shift valus of various protons

Induced shift depends on the angle and the distance as given below.

tBu

tBu

O

O

Ln

3 C3F7

tBu

O

O

Ln

3

O

C3F7

O

Ln3

Page 12: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Me

O2N

OH

CH2CN

O2N

Me

OH

CH2CN

E

Z [Eu]

Me of E isomer

Me of Z isomer

Page 13: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department
Page 14: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department
Page 15: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department
Page 16: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Stereoisomers can be distinguished from one another by comparison of

chemical shift and coupling constant values

Relative configurations can be established by comparison of J values

NOE difference spectroscopy can be used for determining geometry and

stereochemistry

Achiral lanthanide shift reagents can be used to distinguish

diastereomers

Chiral lanthanide shift reagents can be used to determine ee% of a mixture

Page 17: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

Timothy D. W. Claridge,

High-Resolution NMR Techniques in Chemistry,

Pergamon, 1999

John Wiley, 1998

Page 18: STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY …nptel.ac.in/courses/104106075/week3/MODULE 12.pdf · STEREOCHEMISTRY DETERMINATION USING NMR SPECTROSCOPY S. SANKARARAMAN Department

THANK YOU