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The Krebs Tricarboxylic Acid Cycle. The Final Common Pathway of Oxidative Metabolism 9/24/07. ⑤. ⑥. ①. ④. ②. ③. Liver. Gluconeogenesis; 1 Liver, Kidney. e - Ox phos. Pyruvate. GTP ATP (sub strate level. phosphorylation). Citric Acid Cycle (CAC) “Kreb Cycle” - PowerPoint PPT Presentation
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The Krebs Tricarboxylic Acid Cycle
The Final Common Pathway of Oxidative Metabolism
9/24/07
⑤
⑥
Liver
①
④
②
Gluconeogenesis; 1 Liver, Kidney
e-
Ox phos ③
Citric Acid Cycle (CAC)“Kreb Cycle”
Tricarboxylic Acid Cycle
2/3 of O2 consumption needed foroxidation of Acetyl CoA CO2
• Occurs exclusively in the mitochondrion (matrix)• OAA acts as carrier or acceptor of acetyl CoA units – is regenerated
• “Burns” acetyl CoA to CO2 – during this oxidation eˉs from acetyl CoA are trapped in the form of:
NADHFADH
Pyruvate
Pyruvate DehydrogenaseComplex “links”glycolysis to CAC
+ 2eˉ
+ 2eˉ
GTP ATP (substrate levelphosphorylation)
+ 2eˉ
+ 2eˉ
The Three Stages of Metabolism
The Krebs CycleCitric Acid Cycle; The TCA Cycle
• Pyruvate (actually the acetyl group) from glycolysis is degraded to CO2 – The acetyl group is formed in stage II of metabolism from
carbohydrate and amino acid metabolism• 1GTP (ATP in bacteria) and 1 FADH2 is produced
during one turn of the cycle• 3 NADH are produced during one turn of the cycle • NADH and FADH2 energize electron transport and
oxidative phosphorylation• Eight reactions make up the Krebs cycle
The Chemical Logic of the Krebs Cycle
• After condensing acetate with oxaloacetate to form citrate – oxidation yields CO2, oxaloacetate is regenerated, and the energy is captured as NADH, FADH2, and GTP (ATP)– Acetyl-CoA is called the stoichiometric substrate; it is
consumed in large amounts– Oxaloacetate is called the regenerating substrate; it is
continuously regenerated (it is not consumed)• The cycle is catalytic; oxaloacetate is consumed and
then regenerated.
Overview of the Krebs Cycle: A Mitochondrial Process
Anatomy of the Mitochondrion
• Which membrane is impermeable to protons and other ions?
• Which membrane will allow for the transport of molecules up to a molecular weight of about 1000?
Pyruvate Dehydrogenase Complex
Multimolecular aggregate3 Enzymes5 Coenzymes
5 Reactions
CoA contains thevitamin Pantothenic acid
Product Inhibition
CoenzymesThiamine Pyrophosphate (TTP) B1NAD+
FAD+
CoA
Lipoic acid
Mitochondrial matrix
Cytoplasm Pyruvate
* Pyruvate transporter
* Pyruvate mito matrix
Irreversible
Links glycolysis to CAC
PDH Deficiency – results in Congenital Lactic AcidosisPyruvate cannot enter the CAC and results in ↑ Lactic AcidPrimarily affects the brain – neonatal death3 Forms – psychomotor retardation√ Possible treatment is ketogenic diet:
Low in CHOHigh in fats
Produces ketone bodies as an alternate form of energy for the brain
CAC
Arsenic Poisoning – Pyruvate Dehydrogenase – -Ketoglutarate Dehydrogenase
Both require lipoic acid as a cofactor
Arsenite – Trivalent form of arsenic I° – Forms a stable complex with the thiol (-SH) group of Lipoic Acid II° – Glyceraldehyde 3-PO4 step forms complex with inorganic Pi thus prevents ATP formation in glycolysis
Affects the brain – Death, neurologic problems
√ Allosteric Regulation
√ AllostericRegulation
cAMP independent
Skeletal muscleContraction
Fluorocitrate OAA
( ¯ )
FluoroacetateFluroacetyl CoA
Rat poison
ADP (+)
One of the rate limiting Rxsof the CAC
ATP
Carrier
Aldo condensation
The entrance of acetyl CoA doesnot ↑ or ↓ intermediates in the CAC
Oxidative decarboxylatione¯Irreversible (1)
Isomerization
NADH ( - )
Oxidative decarboxylationVery similar to the Pyruvate Dehydrogenase complex
Irreversible (2)ATP. GTPSuccinyl CoANADH
( ¯ )
e¯
From oxidation ofodd number FAs
ADP GDPATP
Nucleoside BiphosphateKinase
“Substrate LevelPhosphorylation”
e¯ Oxidation reaction
Hydration reaction
e¯( 4 )
Reversible oxidation reaction
Main Points of the Krebs Cycle• Occurs in mitochondrion• All enzymes are hydrophilic and occur in the matrix
except for succinate dehydrogenase, which occurs in the inner mitochondrial membrane
• Citrate synthase, Isocitrate dehydrogenase and -ketoglutarate dehydrogenase are the three irreversible reactions
• ICD is the main regulatory enzyme, and it is activated by ADP
• Succinate dehydrogenase is inhibited by malonate and oxaloacetate
Summary
Regulation of the CACDependent on the energy state ofthe cell which is reflected by[ADP] [Pi]
[ATP]ratio
This ratio determines the rate ofoxidative phosphorylation
Named “Respiratory Control”of energy production because oxidationand phosphorylation of ADP must occur simultaneously
Electrochemical gradientOxidized Reduced
1
2 3
4
6
75
8
2 Shuttle systems to bring cytosolic NADH intomitochondria for oxidative phosphorylation
1) Glycerophosphate shuttle = 36 ATP
2) Malate-aspartate shuttle = 38 ATP
Count ATPs: Anerobic glycolysis = 2 Glycolysis + CAC + oxidative phosphorylation = 38NADH FADH2 ATP
1 Glycolysis 2
2 Glycolysis (G-3-P 1,3,BisP) 2 6
3 Pyruvate Acetyl CoA 2 6
4, 5, 6 CAC 6 18
7 CAC-FADH2 2 4
8 CAC – substrate level ATP 2
Total 38