1
The Yang cycle in higher plants Benjamin Pommerrenig 1 , Wolfgang Zierer 1 , Franz Klebl 1 , Kirsten Feussner 2 , Ivo Feussner 2 , Norbert Sauer 1 1 Molekulare Pflanzenphysiologie, FAU ErlangenNürnberg, Staudtstraße 5, 91058 Erlangen, Germany 2 Abteilung Biochemie der Pflanze, AlbrechtvonHallerInstitut für Pflanzenwissenschaften, JustusvonLiebigWeg 11, 37077 Göttingen, Germany 2 Vascular specific expression of MTN, MTK and ARD genes 1 Introduction and overview 6 Summary We identified all genes coding for enzymes of the plant Yang cycle to be expressed exclusively or predominantly in the phloem part of the vascular tissue. We could show this for the so far known Yang cycle genes coding for MTN, MTK and ARD enzymes as well as for the yet missing genes coding for MTI and DEP proteins. Comparative metabolite analyses of both SAM and MTA in isolated vascular tissue and mesophyll from Plantago source leaves could show a clear accumulation of these two Yang cycle products in the vascular bundles. The Yang cycle [also named Methionine cycle, Methionine salvage pathway or 5‘Methylthioadenosine (MTA) cycle] is a set of reactions that recycle MTA to methionine. MTA is produced either from SAdenosyl methionine (SAM) or decarboxylated SAM (dSAM) in the biosynthetic pathways leading to either ethylene, polyamines or phytosiderophores. With quantitative RTPCR and PromoterGUS analyses we investigated the expression of genes coding for enzymes of the Yang cycle in Arabidopsis and Plantago major. To analyze distribution of SAM and MTA in isolated vascular tissue and mesophyll from Plantago source leaves, comparative analyses by UPLCTOF were performed in these tissues. Additionally we identified so far uncharacterized genes coding for enzymes that catalyze two important steps in the Yang cycle, namely the conversion of MTR1P to MTRu1P and from MTRu1P to DHKMP (see Yang cycle overview below for abbreviations). Yeast mutants defective in the Yang cycle genes MRI1, MDE1 or UTR1 transformed with the genes for the predicted Arabidopsis homologs either in sense (s) or in antisense (as) orientation. Expression of MTI1 in (s) but not in (as) complements the growth defect of the mri1 mutant on MTA medium. Expression of DEP1 (for DEHYDRATASEENOLASEPHOSPHATASE COMPLEX1) complements the growth defects of mde1 and utr4 mutants. 3 MTI1 and DEP1: Two newly identified Yang cycle genes Hier kommt ein Foto von mir rein 4 Vascular specific epression of MTI and DEP genes Vascular specific expression was detected for the MTI1 and the DEP1 genes both with qPCR with cDNA from vascular against nonvascular tissue from Plantago (A) and with PromoterGUS analyses in Arabidosis (B). In Plantago, two homologous DEP genes, named PmDEP1 and PmDEP2 were identified. A B pAtMTI1:: AtMTI::GUS pDEP1:: AtDEP1::GUS (A) qPCR with cDNA from isolated vascular bundles (VB) and leaf tissue without VB from Plantago major. mRNA levels of MTK1 and ARD1 transcripts are highly enriched in the VB fraction. (B) Vascular tissue can easily be separated from Plantago leaves. Bundles and remaining leaf tissue can be used for RNA isolation and for metabolite analyses as well. White arrowheads point to minor veins, which cannot be separated from the mesophyll. (C) Staining of Arabidopsis plants expressing GUS fusions under the control of promoters from known Yang cycle genes is specific for the vascular tissue. PmMTK1 PmARD1 A pAtMTK::GUS Staining in the vasculature of whole leaves (a,b) and in the phloem part of a small (c) and large (d) bundle pAtARD1::AtARD1:: GUS (a, b) pAtARD2::AtARD2:: GUS (c) pAtARD3::GUS (d, e) pAtARD4::AtARD4:: GUS (f) pAtMTN1::GUS Staining in the leaf vasculature (a,b) and in the phloem (c) a b c d a b c f e d a b c C B 5 Detection of Yang cycle metabolites in vascular bundles The Yang cycle in plants In a series of reactions MTA, produced as a byproduct from e.g. polyamine synthesis is converted back to methionine. A nucleosidase (MTN), a kinase (MTK), an isomerase (MTI), a dehydrataseenolasephosphatase complex (DEP) and a acidoreductonedioxygenase (ARD) are all involved in this backconversion. In the overview on the left, metabolites are printed in black, MTA producing biosynthetic pathways are highlighted in yellow and catalyzing enzymes are printed in blue. MIPS numbers are given for corresponding genes in Arabidopsis. BoxWhisker plots of 6 metabolites that were measured by UPLCTOF. Disaccharides were 8fold enriched in vascular bundles, whereas hexoses were 10fold higher in the mesophyll. Three Yangcycle metabolites, Met, SAM and MTA, could be identified in our preparations. Met and MTA were about 6fold enriched in the vasculature, the enrichment of SAM was about 200fold. This high value for SAM is the consequence of low intensities in vascular preparations and intensities below the detection limit in preparations from nonvascular tissue. Surprisingly, arginine, a precursor of putrescine biosynthesis in Arabidopsis was also more than 100fold enriched in the vasculature. yellow 6 Summary

The Yang cycle in higher plants...The Yang cycle in higher plants Benjamin Pommerrenig1, Wolfgang Zierer1, Franz Klebl1 , Kirsten Feussner ... biosynthetic pathways are highlighted

  • Upload
    others

  • View
    3

  • Download
    0

Embed Size (px)

Citation preview

  • The Yang cycle in higher plantsBenjamin Pommerrenig1, Wolfgang Zierer1, Franz Klebl1 , Kirsten Feussner2 , Ivo Feussner2, Norbert Sauer11 Molekulare Pflanzenphysiologie, FAU Erlangen‐Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany2 Abteilung Biochemie der Pflanze, Albrecht‐von‐Haller‐Institut für Pflanzenwissenschaften, Justus‐von‐Liebig‐Weg 11, 37077 Göttingen, Germany

    2  Vascular specific expression of MTN, MTK and ARD genes

    1  Introduction and overview

    6  Summary

    We identified all genes coding for enzymes of the plant Yang cycle to be expressedexclusively or predominantly in the phloem part of the vascular tissue. We couldshow this for the so far known Yang cycle genes coding for MTN, MTK and ARDenzymes as well as for the yet missing genes coding for MTI and DEP proteins.Comparative metabolite analyses of both SAM and MTA in isolated vascular tissueand mesophyll from Plantago source leaves could show a clear accumulation ofthese two Yang cycle products in the vascular bundles.

    The Yang cycle [also named Methionine cycle, Methionine salvage pathway or 5‘‐Methylthioadenosine (MTA) cycle] is a set of reactions that recycle MTA tomethionine. MTA is produced either from S‐Adenosyl methionine (SAM) ordecarboxylated SAM (dSAM) in the biosynthetic pathways leading to eitherethylene, polyamines or phytosiderophores. With quantitative RT‐PCR andPromoter‐GUS analyses we investigated the expression of genes coding forenzymes of the Yang cycle in Arabidopsis and Plantago major. To analyzedistribution of SAM and MTA in isolated vascular tissue and mesophyll fromPlantago source leaves, comparative analyses by UPLC‐TOF were performed inthese tissues. Additionally we identified so far uncharacterized genes coding forenzymes that catalyze two important steps in the Yang cycle, namely theconversion of MTR‐1‐P to MTRu‐1‐P and from MTRu‐1‐P to DHKMP (see Yangcycle overview below for abbreviations).

    Yeast mutants defective in the Yang cyclegenes MRI1, MDE1 or UTR1 transformedwith the genes for the predictedArabidopsis homologs either in sense (s)or in antisense (as) orientation.Expression of MTI1 in (s) but not in (as)complements the growth defect of themri1 mutant on MTA medium.Expression of DEP1 (for DEHYDRATASE‐ENOLASE‐PHOSPHATASE COMPLEX1)complements the growth defects ofmde1 and utr4mutants.

    3  MTI1 and DEP1: Two newly identified Yang cycle genes 

    Hier kommt ein Foto von mir rein

    4 Vascular specific epression of MTI and DEP genes 

    Vascular specific expression was detected for the MTI1 andthe DEP1 genes both with qPCR with cDNA from vascularagainst non‐vascular tissue from Plantago (A) and withPromoter‐GUS analyses in Arabidosis (B). In Plantago, twohomologous DEP genes, named PmDEP1 and PmDEP2 wereidentified.

    A BpAtMTI1::AtMTI::GUS

    pDEP1::AtDEP1::GUS

    (A) qPCR with cDNA from isolated vascular bundles (VB) and leaf tissue without VB fromPlantago major. mRNA levels of MTK1 and ARD1 transcripts are highly enriched in the VBfraction.(B) Vascular tissue can easily be separated from Plantago leaves. Bundles and remaining leaftissue can be used for RNA isolation and for metabolite analyses as well. White arrowheadspoint to minor veins, which cannot be separated from the mesophyll.(C) Staining of Arabidopsis plants expressing GUS fusions under the control of promoters fromknown Yang cycle genes is specific for the vascular tissue.

    PmMTK1

    PmARD1

    A

    pAtMTK::GUSStaining in the vasculature of whole leaves (a,b) and in the phloem part of a small (c) and large (d) bundle 

    pAtARD1::AtARD1::GUS (a, b)pAtARD2::AtARD2::GUS (c)pAtARD3::GUS (d, e)pAtARD4::AtARD4::GUS (f)

    pAtMTN1::GUS Staining in the leafvasculature (a,b) and in the phloem (c) 

    a b c

    d

    a b c

    fed

    a b

    c

    C

    B

    5 Detection of Yang cycle metabolites in vascular bundles 

    The Yang cycle in plants

    In a series of reactions MTA, produced as abyproduct from e.g. polyamine synthesis isconverted back to methionine. Anucleosidase (MTN), a kinase (MTK), anisomerase (MTI), a dehydratase‐enolase‐phosphatase complex (DEP) and aacidoreductone‐dioxygenase (ARD) are allinvolved in this back‐conversion. In theoverview on the left, metabolites areprinted in black, MTA producingbiosynthetic pathways are highlighted inyellow and catalyzing enzymes are printedin blue. MIPS numbers are given forcorresponding genes in Arabidopsis.

    Box‐Whisker plots of 6 metabolites thatwere measured by UPLC‐TOF.Disaccharides were 8‐fold enriched invascular bundles, whereas hexoseswere 10‐fold higher in the mesophyll.Three Yang‐cycle metabolites, Met, SAMand MTA, could be identified in ourpreparations. Met and MTA were about6‐fold enriched in the vasculature, theenrichment of SAM was about 200‐fold.This high value for SAM is theconsequence of low intensities invascular preparations and intensitiesbelow the detection limit inpreparations from non‐vascular tissue.Surprisingly, arginine, a precursor ofputrescine biosynthesis in Arabidopsiswas also more than 100‐fold enriched inthe vasculature.

    yellow

    6 Summary