41
Museum of Anatolian Civilizations, B.C. 2. century Museum of Anatolian Civilizations, B.C. 2. century Biyoteknolojik yöntemlerle kiral biyoaktif ürünlere geçiş YEŞİL KİMYA AYHAN S. DEMIR Orta Doğu Teknik Üniversitesi Ankara [email protected]

YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

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Page 1: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Museum of Anatolian Civilizations, B.C. 2. centuryMuseum of Anatolian Civilizations, B.C. 2. century

Biyoteknolojik yöntemlerle kiral biyoaktif ürünlere

geçiş

YEŞİL KİMYA

AYHAN S. DEMIROrta Doğu Teknik ÜniversitesiAnkara [email protected]

Page 2: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

KimyaOrganik kimya

Öldürür Güldürür AglatırBayıltırMutlu ederMutsuz ederHasta ederTedavi ederAşkın temelidir

Savaştırır

Barıştırır

Page 3: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Principles of Principles of Principles of Principles of Principles of Principles of Principles of Principles of greengreengreengreengreengreengreengreen chemistrychemistrychemistrychemistrychemistrychemistrychemistrychemistry

Page 4: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Green chemistry strategies target each stage of a product’s lifecycle to continually

improve its biological and ecological safety,reduce its energy consumption, and

eliminate the production of hazardous and product waste.

http://www.coeh.ucla.edu/Greenchemistry.pdf

Page 5: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

�� � � �� � � �� �� � � � � � � � � � � � � � � � � � �

http://www.coeh.ucla.edu/Greenchemistry.pdf

Page 6: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

� Of the 81,600 chemicals

in the TSCA inventory,

62,000 were not

subjected to review for

their potential hazards to

human health or the

environment. The U.S.

EPA found that 85% of

notices submitted by

producers for new

chemicals lacked health

effects data

http://www.coeh.ucla.edu/Greenchemistry.pdf

Page 7: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

While the public perception is that plastics are recycled, in fact, plastic recovery

has hovered around 3 percent, while plastic waste generation grows steadily.

Source: U.S. EPA, 2005

http://www.coeh.ucla.edu/Greenchemistry.pdf

Environment

Page 8: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

� � � � � � � �� �

Air and waterAir and waterAir and water contaminationcontaminationcontaminationcontamination

� California DTSC estimates

that 61 of 85 of the

state’s largest hazardous

waste sites are leaking

into groundwater. Of 51

sites inspected for

groundwater intrusion,

94% were found to

present, “a major threat

to human health or the

environment.

http://www.coeh.ucla.edu/Greenchemistry.pdf

Page 9: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

� � � � � � � � � � � � � � � � �Breast milk contains many industrial chemicals, including methylene

chloride, toluene, trichloroethylene and xylene. While on balance breast

milk protects infant health, the potential effects of even minute amounts

of chemical contaminants in breast milk are of serious concern.

http://www.coeh.ucla.edu/Greenchemistry.pdf

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� � � � � � � �

’ Health

The vast majority of chemicals to which children are commonly

exposed have never been examined for their long-term effects on

the developing brain.

http://www.coeh.ucla.edu/Greenchemistry.pdf

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http://www.coeh.ucla.edu/Greenchemistry.pdf

The incidence of certain pediatric and reproductive health disorders is on the

rise, including hypospadias, reduced sperm count (variable by region), and the

childhood cancers that are most commonly linked to chemical exposures. Source:

Sharpe and Irvine, 2004, Surveillance Epidemiology and End Results (SEER)

Program 2004.

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� � ! " # # $ % " & 'In 2004, more than 4,000 Californians died prematurely from

chronic diseases attributable to workplace chemical exposures.

http://www.coeh.ucla.edu/Greenchemistry.pdf

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() * * + , - * . /0 1) 2offers many promises,

including substantial reductions in

the environmental footprint of many

chemical processes, improvements in

the health and safety of those

exposed to chemicals, and enhanced

security at facilities with hazardous

materials.

Page 14: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır
Page 15: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

3 45 6 78 9 : ;5< 7=>Chemical designChemical designChemical design

• Formulate chemicals to

be effective while

reducing human and ecosystem toxicity

• Favor renewable

materials over fossil fuel

feedstocks where it

provides a net ecological gain

• Design chemicals to break down into

innocuous substances

after use

http://www.coeh.ucla.edu/Greenchemistry.pdf

Page 16: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Green chemistry can be summarized in five

points as;

less

safe

process-oriented

waste-reducing

sustainable

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For a reaction to be green, it must;

• Use benign solvents or completely dispense with the solvent.

• Use alternate, more efficient and effective

reagents/catalysts.

• Optimize the reaction conditions by using cost-effective,

ecofriendly alternative processes.

Page 18: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Six methods exist for activating molecules

in chemical reactions;

Classical methods

thermal

photochemical

electrochemical

Nonclassical methods

sonication

mechanical

microwave

Page 19: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Comparison of the methodologies;

Page 20: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

? � �� � � � @ � � A �B C � � � � � � � � � � �� � D� �� � � � �Ultrasound Vs. Thermal Assisted ReactionsUltrasound Vs. Thermal Assisted ReactionsUltrasound Vs. Thermal Assisted Reactions

ICOOMe

ULTRASOUND;

Pd(PPh3)4, NEt3, CH3CN,

C6H6, 50oC, )))), 6h

COOMeTHERMAL;

76% (stir, 80oC, 24h, 71%)

HP

O

OEtOEt

S

NH

CH3

ULTRASOUND;

PhCH3, )))), 80oC, 90min, >90%

THERMAL;Thermal reaction exhibits an induction period of ca. 1 h, then proceeds to give 50% of the adduct after 2 h.

P

O

OEtOEt

NH

HS

H3C

Page 21: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

� � � � � � E� A �B C � � � � � � � � � � �� � D� �� � � � �Microwave Vs. Thermal Assisted ReactionsMicrowave Vs. Thermal Assisted ReactionsMicrowave Vs. Thermal Assisted Reactions

COOH H2SO4

(MW, 1min) (thermal, 80min)

CO2CH3

OMe HBr (MW, 1min)

(thermal, 72 hours)

OH

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F 45 8 4 9 : :5> = 5< GH I ;5< 7=> 7> = 9< J> K 45 K 78 I H L K5 8 9>therefore be listed as;

• Minimize overall number of steps.

• Maximize yield per step.

• Maximize atom-economy per step.

• Use stoichiometric conditions.

• In multistep syntheses, perform the following:

Maximize frequency of condensations, MCRs, rearrangements, C-C

and non-C-C bond-forming reactions. Minimize frequency of substitutions (protecting group strategies) and redox reactions.

• If forced to use oxidations, opt for hydrogen peroxide as oxidant.

• If forced to use reductions, opt for hydrogen as reductant.

• Devise electrochemical transformations.

• Devise catalytic methods where catalysts are recycled and reused.

• Devise regio-/stereoselective synthetic strategies.

• Opt for solventless reactions, recycle solvents, or use benign solvents

(ionic liquids).

• Minimize energy demands: heating, cooling, reactions under pressure.

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� � � � � � � � �

Green Chemistry

• Catalytic reagents reduce the energy of the

transition state, thereby reducing the energy

input required for a process.

• Catalysts are required in small quantities. In the

case of biocatalysts, the number of catalysts

(generally enzymes)needed compared to the

quantity of reactants is very low.

• The regeneration and reversibility of catalysts

are good for green processes.

Page 24: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

CH3

OH

3 CrO3 H2SO4CH3

O

3 Cr2(SO4)3 6H2O

Jones oxidation of secondary alcohol

CH3

OH

1/2O2catalyst CH3

O

H2O

Atom-economical oxidation of secondary alcohol

Page 25: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

• The use of zeolites in the manufacture of cumene is of immense

importance. About 7 million metric tons of cumene are produced

annually worldwide.

• The earlier-used process involved alkylation of benzene over a solid

phosphoric acid or an aluminum chloride catalyst.

• The Mobil/Badger cumene process (Mobil Technology Co., 1997)uses the less toxic carozine zeolite catalyst (see Fig. 3.7). In addition, it also generates less waste and requires less energy than

the earlier catalysts, thus simultaneously satisfying various

conditions of green chemistry.

Zeolite Catalyst

Mobil/Badger cumene process.

Page 26: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Synthesis of the anti-inflammatory drug naproxen

H3CO

CH3

O

1.CO2, electrolysis

2.H3O+

H3CO

CH3

OHCOOH

H2O

acid catalysis

chiral catalyst H3CO

CH2

COOHH2O

H3CO

CH3

COOH

BINAP [2,21-bis(diaryl phospheno)-

1,11-binaphthyl] is used

Page 27: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

M � � � � C � � N � � � � �

GREEN CHEMISTRY

o The use of enzymes and microorganisms, which nature has developed,is undoubtedly an ideal choice toward "greening" chemical reactions.

o The industrial use of enzymes and microorganisms in food processing and in the production of fine chemicals, drugs, and detergents has been undergoing a drastic development in the last decades (Stinson, 1999; Thayer, 2001).

o Stereospecific synthesis - the main stay of biotransforma-

tions - is of immense importance in the drug industry, with an estimated market of about US$100 billion worldwide (Stinson, 1999; Krishna, 2002).

o Moreover, the homochiral drug market is expected to grow even bigger, increasing from having 25% to accounting for 70% of the total fine chemical market during the 21st century (Schulze and Wubbolts, 1999).

Page 28: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

M �� � � � � � � � D� �� � � � E �B � � � � � � � D� �� � � �

Page 29: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

M � � C D � � � O � D � � C � � � �Enzymes can carry out exquisitely selective chemistry that

is very difficult to achieve by conventional means; thus, they may offer many valuable advantages across a range

of industry sectors.

Which industry sectors benefit from biotransformations?Which industry sectors benefit from biotransformations?Which industry sectors benefit from biotransformations?Which industry sectors benefit from biotransformations?

• Pharmaceuticals

• Fine & Bulk Chemicals

• Food

• Cosmetics

Page 30: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

P � � � �� � � � � � �� � � � � �� � � � � � What are the potential benefits of What are the potential benefits of What are the potential benefits of

biotransformations?biotransformations?biotransformations?biotransformations?

o Reduced cost of goods

o Environmentally friendly ('green' technology)

o Reduced by-products

o Cleaner effluent streams

o Shorter manufacturing routes

o Control/selection of required enantiomers by assymetric route development

o Chiral intermediates

o Resolution of racemic mixtures

o Eliminate need for heavy metals, high temperatures & pressures

o Neutral reaction conditions

o Natural processing

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CHIRALITY

Chiral molecules are

chemically identical to each

other but possess unique

three-dimensional shapes,

making them mirror-images

that are not superimposable

on each other. Although

chemically identical, chiral

molecules may possess very

different biological properties

Enantiomers can be separated - or one of the two can be preferentially

produced - through the use of biotransformations

http://www.novactabio.com/biotrans.php

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BIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONSBIOCATALYTIC REACTIONS

ENZYMATICWHOLE

CELL

Page 33: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Patents:EU : 1297159, 2000WO: 02002753, 2002.

J. Chem. Soc., Perkin Trans. I, 2001, 633

Adv. Synth. Catal. 2002, 344, 96

Org. Lett. 2003, 5, 2047

Clean 2007

Benzaldehyde lyase from Benzaldehyde lyase from Pseudomonas fluorescensPseudomonas fluorescens Biovar I Biovar I (BAL (BAL

EC 4.1.2.38)EC 4.1.2.38)

Catalyzed EnantioselectiveCatalyzed Enantioselective

Synthesis of Hydroxy Ketones Synthesis of Hydroxy Ketones viavia Cleavage anCleavage and d FormationFormation ofof

AcyloiAcyloin n LinkageLinkage

91-99%eeGonzales, B; Vicuna, R. J. Bacteriol, 1989, 171, 2401

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O

O

OCH3

OCH3

O

OH

OCH3

OCH3*

NH2

OH

O

OH*

P h eny lisoserin e(Ta xol sid e chain )

BAL BAL APPLICATIONSAPPLICATIONS

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TAXOL

O

O

OHOO

O

OH O

O

OH H

O

NH

OH

O

OH

O

+

Baccatin III

Taxol Side Chain

NH

OH

O

O

O

O

O

OHOO

O

OH O

O

H

OTaxol

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O

OH

Cl

O

OH

F

O

OHFF

SO2CH3FF F

N

Cl

O

HO

N

N

N O

H

HO

F

F

NH

F

F

N

N

N

N

S

CN

OH

Bupropion Sch 42427/ Sm9164 ER-303465

Ro 09-3355

1555U88

O

H

BAL

buffer/DMSO

acetaldehyde

O

OH

ee 97% - > 99%

cy: 80-98%

R R

Adv. Synthesis and Catalysis, 2002, 344, 96

Tetrahedron Asymmetry, 2001, 12, 1953

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HN

O N

S

COOH

HH

O

Me2SiCl2

PhNMe2CH2Cl2

HN

O N

S

COOSiMe2

HH

OCl

CH2Cl2 -40oC

PCl5

N

Cl N

S

COOSiMe2

HH

OCl

1. ROH

2. H2O

+H3N

N

S

COO-

HH

O

6-APA

Synthesis of PenicillinSynthesis of PenicillinSynthesis of PenicillinSynthesis of Penicillin----GGGG

Classical Method

Bio-catalytic Method (Enzymatic)

HN

O N

S

COOH

HH

O

Penicillin

acylase

+H3N

N

S

COO-

HH

O

COOR

6-APA

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� � � � � � � � � � � �� � � � �H3PO4

400-600 pSi

200-260oC

O2/ 80-130oC

SO2/ 60-100oC

OH O

70% H2O2

EDTAFe2+ or Co2+

70-80oC

OH

OH

OH

OH

Classical Method

O

OH

OH

OH

HOOH

E.coli AB2834/pKD136/pKD9.069 A

OH

OH

Bio-catalytic Method (Whole cell)

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www.cbc.ca/consumers/market/files/cars/biodiesel/

Page 40: YE Şİ L K İMYA - Çanakkale Onsekiz Mart Universitymaycalistaylari.comu.edu.tr/calistay2008/sunumlar/konferans/...Kimya Organik kimya Öldürür Güldürür Aglatır Bayıltır

Biodiesel Production

Biodiesel is biodegradable which means when it spills it

breaks down much faster than petroleum diesel

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Biodiesel Pros

- It's renewable, because it's produced from natural sources

- Can help stop our dependence on foreign oil

- Can help stop global warming

- Biodiesel is safer to

store and transport than petroleum diesel