EDUCATION AND POSITIONS 2014-‐ Principal Investigator, Fungal Genomics & Evolution Lab (Lendület Program), Institute of
Biochemistry, BRC, Szeged, Hungary.Positions 2013 Postdoctoral Research Fellow, Clark University, Worcester, USA.
2012 Research Fellow (Rosztóczy Alapítvány), Clark University, Worcester, USA.
2012 PhD. University of Szeged, Hungary.
2010 Visiting researcher (SYNTHESYS Program), University of Leiden, The Netherlands.
2009 The Fungal Research Trust Fellow (3 years), University of Szeged, Hungary.
2008 M.Sc. in Biology, University of Szeged, Hungary.
2006 Visiting researcher (SYNTHESYS Program), University of Leiden, The Netherlands.
PUBLICATIONS 2014 Nagy GL, Ohm R, Kovacs GM, Floudas D, Riley R, Gacser A, Davis JM, Doty SL, de Hoog S, Spatafora J, Martin F, Grigoriev IV, Hibbett DS. (2014) Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts. Nat Comms 5:4471 DOI: 10.1038/ncomms5471. Riley R, Salamov A, Brown D, Nagy GL, Floudas D, Held B, Levasseur A, Morin E, Otillar R, Linquist E, Baker S, Pisabarro A, Walton J, Blanchette R, Henrissat B, Martin F, Cullen D, Hibbett DS, Grigoriev IV (2014) Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/brown rot paradigm for wood decay fungi. Proc Natl Acad Sci U. S. A. doi/10.1073/pnas.1400592111. 2013 Ruiz-‐Duenas FJ, Lundell T, Floudas D, Nagy GL, Barrassa JM, Hibbett DS, Martinez AT. (2013) Lignin-‐degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes. Mycologia 105(6): 1426-‐44. Morin E, Kohler A, Baker AR, Foulongne-‐Oriol M, Lombard V, Nagy GL, Ohm RA, Patyshakuliyeva A, Brun A, Aerts AL, Bailey AM, Billette C, Coutinho PM, Deakin G, Doddapaneni H, Floudas D, Grimwood J, Hildén K, Kües U, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Murat C, Riley RW, Salamov AA, Schmutz J, Subramanian V, Wösten HAB, Xu J, Eastwood DC, Foster GD, Sonnenberg ASM, Cullen D, de Vries RP, Lundell T, Hibbett DS, Henrissat B, Burton KS, Kerrigan RW, Challen MP, Grigoriev IV, Martin F. (2013) Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-‐rich ecological niche. Proc Natl Acad Sci U. S. A. doi: 10.1073/pnas.1206847109
Tóth A, Hausknecht A, Krisai-‐Greilhuber I, Vágvölgyi Cs, Papp T, Nagy GL. 2013. An iterative alignment strategy helps eliminating guide tree bias from alignment and phylogeny of the mushroom family Bolbitiaceae. Plos One 8(2): e56143, doi:10.1371/journal.pone.0056153 Nagy GL, Desjardin D, Vágvölgyi Cs, Papp T. 2013. A phylogenetic species concept identifies multiple species within morphologically discerned taxa of sections Lanatuli and Atramentarii of the genus Coprinopsis. Mycologia 105(1): 112-‐24. Nagy GL, Vágvölgyi Cs, Papp T. 2013. Morphological characterization of clades of the Psathyrellaceae (Agaricales) inferred from a multigene phylogeny. Mycological Progress, 12(3): 505-‐517. 2012 Nagy GL, Kocsubé S, Csanádi Z, Kovács GM, Petkovits T, Vágvölgyi Cs, Papp T. 2012 Re-‐Mind the gap! Insertion-‐Deletion Data reveal neglected phylogenetic potential of the fungal internal trabscribed spacer. Plos One 7(11): e49794. doi:10.1371/journal.pone.0049794 Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Górecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kües U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy GL, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-‐Dueñas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS (2012) Paleozoic origin of enzymatic lignin decomposition reconstructed using 31 fungal genomes. Science 336: 1715-‐19. Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Bolchacova E, Voigt K, Crous PW, Miller AN, Wingfield MJ, Aime MC, An KD, Bai FY, Barreto RW, Begerow D, Bergeron MJ, Blackwell M, Boekhout T, Bogale M, Boonyuen N, Burgaz AR, Buyck B, Cai L, Cai Q, Cardinali G, Chaverri P, Coppins BJ, Crespo A, Cubas P, Cummings C, Damm U, de Beer ZW, de Hoog GS, Del-‐Prado R, Dentinger B, Diéguez-‐Uribeondo J, Divakar PK, Douglas B, Dueñas M, Duong TA, Eberhardt U, Edwards JE, Elshahed MS, Fliegerova K, Furtado M, García MA, Ge ZW, Griffith GW, Griffiths K, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Guo LD, Hagen F, Hambleton S, Hamelin RC, Hansen K, Harrold P, Heller G, Herrera C, Hirayama K, Hirooka Y, Ho HM, Hoffmann K, Hofstetter V, Högnabba F, Hollingsworth PM, Hong SB, Hosaka K, Houbraken J, Hughes K, Huhtinen S, Hyde KD, James T, Johnson EM, Johnson JE, Johnston PR, Jones EB, Kelly LJ, Kirk PM, Knapp DG, Kõljalg U, Kovács GM, Kurtzman CP, Landvik S, Leavitt SD, Liggenstoffer AS, Liimatainen K, Lombard L, Luangsa-‐Ard JJ, Lumbsch HT, Maganti H, Maharachchikumbura SS, Martin MP, May TW, McTaggart AR, Methven AS, Meyer W, Moncalvo JM, Mongkolsamrit S, Nagy GL, Nilsson RH, Niskanen T, Nyilasi I, Okada G, Okane I, Olariaga I, Otte J, Papp T, Park D, Petkovits T, Pino-‐Bodas R, Quaedvlieg W, Raja HA, Redecker D, Rintoul TL, Ruibal C, Sarmiento-‐
Ramírez JM, Schmitt I, Schüßler A, Shearer C, Sotome K, Stefani FO, Stenroos S, Stielow B, Stockinger H, Suetrong S, Suh SO, Sung GH, Suzuki M, Tanaka K, Tedersoo L, Telleria MT, Tretter E, Untereiner WA, Urbina H, Vágvölgyi C, Vialle A, Vu TD, Walther G, Wang QM, Wang Y, Weir BS, Weiß M, White MM, Xu J, Yahr R, Yang ZL, Yurkov A, Zamora JC, Zhang N, Zhuang WY, Schindel D. (2012) Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc Natl Acad Sci U S A. 109:6241-‐6. Pintye A, Bereczky Z, Kovács GM, Nagy GL, Xu X, Legler SE, Váczy Z, Váczy KZ, Caffi T, Rossi V, Kiss L (2012) No Indication of Strict Host Associations in a Widespread Mycoparasite: Grapevine Powdery Mildew (Erysiphe necator) Is Attacked by Phylogenetically Distant Ampelomyces Strains in the Field. Phytopathology 102:707-‐16. Nagy GL, Házi J, Szappanos B, Kocsubé S, Bálint B, Rákhely G, Vágvölgyi Cs, Papp T. (2012) The Evolution of Defense Mechanisms Correlate with the Explosive Diversification of Autodigesting Coprinellus Mushrooms (Agaricales, Fungi). Systematic Biology, 61: 595-‐607. Nagy GL, Házi J, Vágvölgyi Cs, Papp T. (2012) Phylogeny and Species Delimitation in the Genus Coprinellus with Special Emphasis on the Haired Species. Mycologia 104: 254-‐275. 2011 Petkovits T, Nagy GL, Hoffmann K, Wagner L, Nyilasi I, Griebel T, Schnabelrauch D, Vogel H, Voigt K, Vágvölgyi Cs, Papp T. (2011) Data Partitions, Bayesian Analysis and Phylogeny of the Zygomycetous Fungal Family Mortierellaceae, Inferred from Nuclear Ribosomal DNA Sequences. Plos One, 6(11): e27507. doi:10.1371/journal.pone.0027507 Nagy GL, Petkovits T, Kovács GM, Vágvölgyi Cs, Papp T. Where is the unseen fungal diversity hidden? A study of Mortierella reveals a large contribution of reference collections to the identification of fungal environmental sequences. New Phytologist 191, 2011, 789-‐794. Házi J, Nagy GL, Vágvölgyi Cs, Papp T. (2011) Coprinellus radicellus, a new species with northern distribution. Mycol Progress. 10:363-‐371. Nagy GL, Walther G, Vágvölgyi Cs, Papp T. (2011) Understanding the Evolutionary Processes of Fungal Fruiting Bodies: Correlated Evolution and Divergence Times in the Psathyrellaceae. Systematic Biology, 60:303-‐317. Nagy GL, Urban A, Örstadius L, Larsson E, Papp T, Vágvölgyi Cs. (2010)
The evolution of autodigestion in the mushroom family Psathyrellaceae (Agaricales) inferred from Maximum Likelihood and Bayesian methods Mol. Phylogenet. Evol. 57(3):1037-‐48. Nagy GL, Vágvölgyi Cs, Papp T. (2010) Type studies and nomenclatural revisions in Parasola (Psathyrellaceae) and related taxa Mycotaxon 112:103-‐114. Nagy GL, Kocsubé S, Papp T,, Vágvölgyi Cs. (2009) Phylogeny and character evolution of the coprinoid mushroom genus Parasola as inferred from LSU and ITS nrDNA sequence data Persoonia 22:28-‐37. Takó M, Tóth A, Nagy GL, Krisch J, Vágvölgyi Cs, Papp T. (2010) A new b-‐glucosidase gene from the zygomycete fungus Rhizomucor miehei. Antonie van Leeuwenhoek 97:1–10. Kredics L, Kocsubé S, Nagy GL, Komon-‐Telazowska M, Manczinger L, Nagy A, Vágvölgyi Cs, Kubicek CP, Druzhinina IS, Hatvani L. (2009) Molecular identification of Trichoderma species associated with Pleurotus ostreatus and natural substrates of the oyster mushroom. FEMS Microbiol Lett FEMS Microbiol Lett 300:58-‐67 Bidartondo MI, Bruns TD, Blackwell M, ... Nagy GL (65th author) ... et al. (2008) Preserving accuracy in GenBank. Science 319:1616.