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H7N9 AVIAN INFLUENZA VOL.2
新潟大学大学院 医歯学総合研究科 国際保健学分野
( ~ 2013.4.26)
Division of International Health (Public Health)Graduate School of Medical and Dental Sciences, Niigata University
H7N9 ウイルス遺伝子の特徴• HA 遺伝子はアヒル( H7N3) 、 NA は野鳥の(H7N9) 、内部遺伝子はニワトリの( H9N2)
• 二度大きな遺伝子組み換えが起こったと考えられる (1) A/Shanghai/1/2013
(2) A/Shanghai/2/2013 clusters • 低病原性 HA 遺伝子の開裂部位に塩基性配列が欠
如している• HA 遺伝子に哺乳類へ適応する変異 : Q226L/I と T160A
• PB2 に哺乳類の体温に適応する変異 : E627K と D701N
新潟大学大学院 医歯学総合研究科 国際保健学分野
• H7セグメント:浙江省の鴨群と韓国の野鳥群から分離• N9セグメント:韓国の野鳥 (wild bird) から分離上の 2 つ以外の残り 6 つのセグメントは H9N2 由来で、中国の上海・浙江・江蘇などの土地にいる鶏群からのものであった。
野鳥が移動する過程で、長江デルタ地域の鴨群・鶏群との間で reassortant を起こした可能性が高いと考えられている。
上海市を流れる黄浦江 (Huangpu river) で起こった、伝染病で死んだ豚の大量投棄 (6 , 000 ~ 10 , 000 頭 ) と今回の鳥インフルエンザとの関連性は、豚の死骸から H7N9 ウィルスが検出されなかったことを根拠に否定されている。 ( 豚の伝染病が何であったのかという報道は無い。 )
また、同時期に四川省で 1.000 羽のアヒルの死骸が大量投棄されているのも発見されたが、死因が特定されず、今回の H7N9 との関連性も確認されていない。
新潟大学大学院 医歯学総合研究科 国際保健学分野
HA and PB2 mutations associated with virus adaptation in mammals
H3 a.a. position (H5 no.)110
(103)158
160 (156)
224226
(222)228
(224)318
PB2:627
PB2:701
A/H5N1 wild-type H N T N Q G T E D
A/H5N1 mutant Y D A K L S I K N
A/Shanghai/1/2013 Q N A N Q G T K D
A/Shanghai/2/2013 Q N A N L G T K D
A/Chicken/Shanghai/S1053/2013 Q N A N L G T E D
A/Environment/Shanghai/S1088/2013
Q N A N L G T E D
A/Pigeon/Shanghai/S1069/2013 Q N A N L G T E D
A/Anhui/1/2013 Q N A N L G T K D
A/Hangzhou/1/2013 Q N A N I* G T -- D
A/Hangzhou/2/2013 Q N A N L G T K D
A/Hangzhou/3/2013 Q N A N L G T K D
A/Environment/Hangzhou/34/2013 Q N A N L G T E D
A/Zhejiang/DTID-ZJU01/2013 Q N A N L G T E N
A/chicken/Zhejiang/DTID-ZJU01/2013
Q N A N Q G T E D
Fouchier et al. Science (2012) 336:1534 [HA:H110Y, T160A, Q226L, G228S and PB2:E627K]Kawaoka et al. Nature (2012) 486:420 [HA: N158D, N224K, Q226L, T318I]
Chen et al. Lancet (2013) [HA: T156A, Q226L and PB2:D701N]
Gao et al. NEJM (2013) and Kageyama et al. Eurosurveillance (2013) 18:20453 [HA: T156A, Q226L and PB2:E627K]
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
HA 遺伝子開裂部位=低病原性 リシン、アルギニンの連続配列の欠如
proteolytic cleavage motif
Absence of polybasic sequences (K and R) in the recent H7N9 indicates low pathogenicity. Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
1_PB2
human H1N1pdm09
swine flu
human H3N2
avian flu
A/Environment/Hangzhou/34/2013 | A / H7N9 | 2013-04-04 | PB2 A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | PB2 A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | PB2 A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | PB2 A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | PB2 A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | PB2 (D701N) A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | PB2 (E627K) A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | PB2 (E627K) A/Hangzhou/3/2013 | A / H7N9 | 2013-04-02 | PB2 (E627K) A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | PB2 (E627K) A/Hangzhou/2/2013 | A / H7N9 | 2013-03-25 | PB2 (E627K) A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | PB2 A/chicken/Shanghai/C1/2012 | A / H9N2 | PB2 | 2012-01-01
A/chicken/Zhejiang/611/2011 | A / H9N2 | PB2 | 2011-06-01 A/Netherlands/127/03 | A / H7N7 | PB2 | 2003-01-01
A/green-winged teal/Xianghai/430/2011 | A / H5N2 | PB2 | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | PB2 | 2011-10-01
A/duck/Jiangsu/4/2010 | A / H3N6 | PB2 | 2010-03-01 A/baikal teal/Xianghai/426/2011 | A / H5N2 | PB2 | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | PB2 | 2011-10-01
A/swine/Guangdong/K4/2011 | A / H4N8 | PB2 | 2011-10-21 A/duck/Guangdong/W12/2011 | A / H3N2 | PB2 | 2011-12-22
A/duck/Hubei/5/2010 | A / H6N6 | PB2 | 2010-05-22 A/swine/Hubei/101/2009 | A / H1N1 | PB2 | 2009-08-18
A/duck/Zhejiang/10/2011 | A / H7N3 | PB2 | 2011-06-01 A/duck/Zhejiang/12/2011 | A / H7N3 | PB2 | 2011-06-01
A/duck/Zhejiang/0611-8/2011 | A / H1N3 | PB2 | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | PB2 | 2011-10-01 A/duck/Zhejiang/0224-6/2011 | A / H1N2 | PB2 | 2011-01-01
A/duck/Jiangsu/1-15/2011 | A / H4N2 | PB2 | 2011-01-12 A/duck/Jiangsu/m234/2012 | A / H5N2 | PB2 | 2012-01-18
A/duck/Guangxi/GXd-2/2010 | A / H6N2 | PB2 | 2010-04-02 A/baikal teal/Xianghai/421/2011 | A / H9N2 | PB2 | 2011-10-01
A/chicken/Vietnam/212/2005 | A / H5N1 | PB2 | 2005-12-09 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | PB2 | 2010-05-08
A/turkey/Minnesota/1/1988 | A / H7N9 | PB2 | 1988-07-13 A/blue-winged teal/Ohio/566/2006 | A / H7N9 | PB2 | 2006-01-01 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | PB2 | 2011-01-08 A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | PB2 | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | PB2 | 2008-03-05
A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | PB2 | 1995-05-21 A/Shanghai/60T/2009 | A / H1N1 | PB2 | 2009-05-28 A/Shanghai/37T/2009 | A / H1N1 | PB2 | 2009-05-24 A/Zhejiang/2/2009 | A / H1N1 | PB2 | 2009-05-31 A/Guangdong/02/2009 | A / H1N1 | PB2 | 2009-05-29 A/Zhoushan/52/2009 | A / H1N1 | PB2 | 2009-12-19 A/Shandong/1/2009 | A / H1N1 | PB2 | 2009-05-10 A/Nanjing/2/2009 | A / H1N1 | PB2 | 2009-06-17 A/Beijing/01/2009 | A / H1N1 | PB2 | 2009-05-15(2) A/Beijing/01/2009 | A / H1N1 | PB2 | 2009-05-15 A/GuangzhouSB/01/2009 | A / H1N1 | PB2 | 2009-05-17 A/Jiangsu/S61/2009 | A / H1N1 | PB2 | 2009-11-10 A/swine/Hong Kong/2237/2010 | A / H1N2 | PB2 | 2010-08-02 A/swine/Hubei/04/2009 | A / H1N2 | PB2 | 2009-03-10 A/swine/Guangdong/1/2010 | A / H1N2 | PB2 | 2010-01-30
A/swine/Guangdong/1/2010 | A / H1N1 | PB2 | 2010-01-15 A/swine/Guangdong/2712/2010 | A / H1N2 | PB2 | 2010-08-26 A/swine/Guangdong/2676/2010 | A / H1N2 | PB2 | 2010-08-26
A/swine/Guangdong/09/2009 | A / H1N1 | PB2 | 2009-09-02 A/swine/Guangdong/05/2009 | A / H1N1 | PB2 | 2009-05-05
A/Jilin-Chuanying/1156/2011 | A / H3N2 | PB2 | 2011-03-03 A/Hunan-Yanfeng/165/2011 | A / H3N2 | PB2 | 2011-04-14 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | PB2 | 2011-03-08 A/Shanghai-Luwan/188/2011 | A / H3N2 | PB2 | 2011-02-14 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | PB2 | 2011-05-10 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | PB2 | 2011-03-09 A/Tianjin-Hedong/195/2011 | A / H3N2 | PB2 | 2011-02-15 A/Beijing-Xicheng/1409/2011 | A / H3N2 | PB2 | 2011-02-22 A/Hunan-Beihu/1143/2011 | A / H3N2 | PB2 | 2011-03-11 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | PB2 | 2011-02-20
100
8876
73
70100
9692
100
100
757399
100
100
100
100
100
100
100
9994
100
9991
100
92
100
99
98
100
9982 100
99
9779
70
100100
88
99
85Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
2_PB1
avian flu
human H1N1pdm09
swine flu
human H3N2
A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | PB1 A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | PB1 A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | PB1 A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | PB1 A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | PB1 A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | PB1 A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | PB1 A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | PB1 A/chicken/Shanghai/C1/2012 | A / H9N2 | PB1 | 2012-01-01 A/chicken/Zhejiang/611/2011 | A / H9N2 | PB1 | 2011-06-01 A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | PB1
A/duck/Guangdong/W12/2011 | A / H3N2 | PB1 | 2011-12-22 A/swine/Guangdong/K4/2011 | A / H4N8 | PB1 | 2011-10-21
A/duck/Jiangsu/1-15/2011 | A / H4N2 | PB1 | 2011-01-12 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | PB1 | 2010-05-08
A/duck/Jiangsu/4/2010 | A / H3N6 | PB1 | 2010-03-01 A/duck/Jiangsu/m234/2012 | A / H5N2 | PB1 | 2012-01-18 A/baikal teal/Xianghai/421/2011 | A / H9N2 | PB1 | 2011-10-01
A/duck/Guangxi/GXd-2/2010 | A / H6N2 | PB1 | 2010-04-02 A/duck/Zhejiang/0224-6/2011 | A / H1N2 | PB1 | 2011-01-01 A/green-winged teal/Xianghai/430/2011 | A / H5N2 | PB1 | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | PB1 | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | PB1 | 2011-10-01 A/baikal teal/Xianghai/426/2011 | A / H5N2 | PB1 | 2011-10-01 A/duck/Zhejiang/12/2011 | A / H7N3 | PB1 | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | PB1 | 2011-10-01 A/duck/Zhejiang/10/2011 | A / H7N3 | PB1 | 2011-06-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | PB1 | 2011-06-01
A/duck/Hubei/5/2010 | A / H6N6 | PB1 | 2010-05-22 A/swine/Hubei/101/2009 | A / H1N1 | PB1 | 2009-08-18
A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | PB1 | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | PB1 | 2008-03-05
A/blue-winged teal/Ohio/566/2006 | A / H7N9 | PB1 | 2006-01-01 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | PB1 | 2011-01-08
A/turkey/Minnesota/1/1988 | A / H7N9 | PB1 | 1988-07-13 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | PB1 | 1995-05-21
A/Jilin-Chuanying/1156/2011 | A / H3N2 | PB1 | 2011-03-03 A/Hunan-Yanfeng/165/2011 | A / H3N2 | PB1 | 2011-04-14 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | PB1 | 2011-03-08
A/Shanghai-Luwan/188/2011 | A / H3N2 | PB1 | 2011-02-14 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | PB1 | 2011-05-10 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | PB1 | 2011-03-09 A/Tianjin-Hedong/195/2011 | A / H3N2 | PB1 | 2011-02-15 A/Beijing-Xicheng/1409/2011 | A / H3N2 | PB1 | 2011-02-22 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | PB1 | 2011-02-20 A/Hunan-Beihu/1143/2011 | A / H3N2 | PB1 | 2011-03-11 A/Shanghai/60T/2009 | A / H1N1 | PB1 | 2009-05-28 A/Zhejiang/2/2009 | A / H1N1 | PB1 | 2009-05-31 A/Shanghai/37T/2009 | A / H1N1 | PB1 | 2009-05-24 A/Guangdong/02/2009 | A / H1N1 | PB1 | 2009-05-29 A/GuangzhouSB/01/2009 | A / H1N1 | PB1 | 2009-05-17 A/Beijing/01/2009 | A / H1N1 | PB1 | 2009-05-15 A/Nanjing/2/2009 | A / H1N1 | PB1 | 2009-06-17 A/Beijing/01/2009 | A / H1N1 | PB1 | 2009-05-15(2) A/Jiangsu/S61/2009 | A / H1N1 | PB1 | 2009-11-10 A/Zhoushan/52/2009 | A / H1N1 | PB1 | 2009-12-19 A/Shandong/1/2009 | A / H1N1 | PB1 | 2009-05-10
A/swine/Guangdong/2676/2010 | A / H1N2 | PB1 | 2010-08-26 A/swine/Guangdong/2712/2010 | A / H1N2 | PB1 | 2010-08-26 A/swine/Guangdong/1/2010 | A / H1N1 | PB1 | 2010-01-15
A/swine/Hong Kong/2237/2010 | A / H1N2 | PB1 | 2010-08-02 A/swine/Hubei/04/2009 | A / H1N2 | PB1 | 2009-03-10 A/swine/Guangdong/1/2010 | A / H1N2 | PB1 | 2010-01-30
A/swine/Guangdong/05/2009 | A / H1N1 | PB1 | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | PB1 | 2009-09-02100
100
9899868782
100
100
86
77
100
97
97
82969484
100
100100
100
97
100
96
97
100
100100
84
100
77100
100
100
100
78100
99
100
0.02
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
3_PA
avian flu
human H1N1pdm09
swine flu
human H3N2
A/Shanghai/2/2013 | H7N9 | 2013-01-01 | PA A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | PA A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | PA A/Anhui/1/2013 | H7N9 | 2013-01-01 | PA A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | PA A/Shanghai/1/2013 | H7N9 | 2013-01-01| PA A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | PA
A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | PA A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | PA A/chicken/Shanghai/C1/2012 | A / H9N2 | PA | 2012-01-01 A/chicken/Zhejiang/611/2011 | A / H9N2 | PA | 2011-06-01
A/duck/Zhejiang/12/2011 | A / H7N3 | PA | 2011-06-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | PA | 2011-06-01 A/duck/Zhejiang/10/2011 | A / H7N3 | PA | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | PA | 2011-10-01
A/duck/Hubei/5/2010 | A / H6N6 | PA | 2010-05-22 A/canvasback/Xianghai/428/2011 | A / H5N2 | PA | 2011-10-01
A/green-winged teal/Xianghai/430/2011 | A / H5N2 | PA | 2011-10-01 A/duck/Jiangsu/4/2010 | A / H3N6 | PA | 2010-03-01
A/duck/Jiangsu/1-15/2011 | A / H4N2 | PA | 2011-01-12 A/duck/Jiangsu/m234/2012 | A / H5N2 | PA | 2012-01-18
A/duck/Guangxi/GXd-5/2010 | A / H6N1 | PA | 2010-05-08 A/baikal teal/Xianghai/421/2011 | A / H9N2 | PA | 2011-10-01 A/swine/Guangdong/K4/2011 | A / H4N8 | PA | 2011-10-21 A/duck/Guangxi/GXd-2/2010 | A / H6N2 | PA | 2010-04-02
A/duck/Zhejiang/0224-6/2011 | A / H1N2 | PA | 2011-01-01 A/duck/Guangdong/W12/2011 | A / H3N2 | PA | 2011-12-22
A/baikal teal/Xianghai/426/2011 | A / H5N2 | PA | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | PA | 2011-10-01
A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | PA | 1995-05-21 A/turkey/Minnesota/1/1988 | A / H7N9 | PA | 1988-07-13
A/swine/Guangdong/2676/2010 | A / H1N2 | PA | 2010-08-26 A/swine/Guangdong/2712/2010 | A / H1N2 | PA | 2010-08-26
A/swine/Guangdong/1/2010 | A / H1N1 | PA | 2010-01-15 A/swine/Hong Kong/2237/2010 | A / H1N2 | PA | 2010-08-02
A/swine/Guangdong/1/2010 | A / H1N2 | PA | 2010-01-30 A/swine/Hubei/04/2009 | A / H1N2 | PA | 2009-03-10 A/GuangzhouSB/01/2009 | A / H1N1 | PA | 2009-05-17 A/Jiangsu/S61/2009 | A / H1N1 | PA | 2009-11-10 A/Zhoushan/52/2009 | A / H1N1 | PA | 2009-12-19 A/Nanjing/2/2009 | A / H1N1 | PA | 2009-06-17
A/Shanghai/37T/2009 | A / H1N1 | PA | 2009-05-24 A/Guangdong/02/2009 | A / H1N1 | PA | 2009-05-29 A/Shanghai/60T/2009 | A / H1N1 | PA | 2009-05-28 A/Zhejiang/2/2009 | A / H1N1 | PA | 2009-05-31
A/Shandong/1/2009 | A / H1N1 | PA | 2009-05-10 A/Beijing/01/2009 | A / H1N1 | PA | 2009-05-15 A/Beijing/01/2009 | A / H1N1 | PA | 2009-05-15(2)
A/blue-winged teal/Ohio/566/2006 | A / H7N9 | PA | 2006-01-01 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | PA | 2011-01-08 A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | PA | 2008-02-07
A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | PA | 2008-03-05 A/swine/Hubei/101/2009 | A / H1N1 | PA | 2009-08-18 A/swine/Guangdong/05/2009 | A / H1N1 | PA | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | PA | 2009-09-02
A/Heilongjiang-Nangang/124/2011 | A / H3N2 | PA | 2011-03-08 A/Hunan-Yanfeng/165/2011 | A / H3N2 | PA | 2011-04-14 A/Jilin-Chuanying/1156/2011 | A / H3N2 | PA | 2011-03-03 A/Shanghai-Luwan/188/2011 | A / H3N2 | PA | 2011-02-14 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | PA | 2011-05-10 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | PA | 2011-03-09 A/Beijing-Xicheng/1409/2011 | A / H3N2 | PA | 2011-02-22 A/Tianjin-Hedong/195/2011 | A / H3N2 | PA | 2011-02-15 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | PA | 2011-02-20 A/Hunan-Beihu/1143/2011 | A / H3N2 | PA | 2011-03-11
100
8483100
86
98100
100100
100
100
100
100
73
9998
100100
99100
100
99
100
82
7989
100
95
85
91
100
99
99
100
99
100
100
85
79100
0.02
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
4_HA
human H1N1pdm09
swine flu
avian flu
human H3N2
A/Hangzhou/1/2013 | A / H7N9 | 2013-03-24 | HA A/Environment/Hangzhou/34/2013 | A / H7N9 | 2013-04-04 | HA A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | HA A/chicken/Jiangsu/K27/2013 | A / H7N9 | 2013-04-01 | HA A/Hangzhou/3/2013 | A / H7N9 | 2013-04-02 | HA A/Shanghai/2/2013 | 2013-01-01 | H7N9 | HA A/Anhui/1/2013 | 2013-01-01 | H7N9 | HA A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | HA A/chicken/Jiangsu/K89/2013 | A / H7N9 | 2013-04-01 | HA A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | HA A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | HA A/Hangzhou/2/2013 | A / H7N9 | 2013-03-25 | HA A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | HA A/Shanghai/1/2013 | 2013-01-01 | H7N9 | HA A/duck/Zhejiang/10/2011 | A / H7N3 | HA | 2011-06-01 A/duck/Zhejiang/12/2011 | A / H7N3 | HA | 2011-06-01
A/turkey/Minnesota/1/1988 | A / H7N9 | HA | 1988-07-13 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | HA | 1995-05-21 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | HA | 2011-01-08 A/blue-winged teal/Ohio/566/2006 | A / H7N9 | HA | 2006-01-01 A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | HA | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | HA | 2008-03-05
A/duck/Jiangsu/1-15/2011 | A / H4N2 | HA | 2011-01-12 A/swine/Guangdong/K4/2011 | A / H4N8 | HA | 2011-10-21
A/duck/Guangdong/W12/2011 | A / H3N2 | HA | 2011-12-22 A/duck/Jiangsu/4/2010 | A / H3N6 | HA | 2010-03-01
A/Beijing-Xicheng/1409/2011 | A / H3N2 | HA | 2011-02-22 A/Hunan-Beihu/1143/2011 | A / H3N2 | HA | 2011-03-11 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | HA | 2011-02-20 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | HA | 2011-03-09 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | HA | 2011-05-10 A/Shanghai-Luwan/188/2011 | A / H3N2 | HA | 2011-02-14 A/Hunan-Yanfeng/165/2011 | A / H3N2 | HA | 2011-04-14 A/Jilin-Chuanying/1156/2011 | A / H3N2 | HA | 2011-03-03 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | HA | 2011-03-08 A/Tianjin-Hedong/195/2011 | A / H3N2 | HA | 2011-02-15
A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | HA A/chicken/Shanghai/C1/2012 | A / H9N2 | HA | 2012-01-01 A/chicken/Zhejiang/611/2011 | A / H9N2 | HA | 2011-06-01 A/baikal teal/Xianghai/421/2011 | A / H9N2 | HA | 2011-10-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | HA | 2011-10-01
A/baikal teal/Xianghai/426/2011 | A / H5N2 | HA | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | HA | 2011-10-01 A/green-winged teal/Xianghai/430/2011 | A / H5N2 | HA | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | HA | 2011-10-01 A/duck/Jiangsu/m234/2012 | A / H5N2 | HA | 2012-01-18
A/duck/Hubei/5/2010 | A / H6N6 | HA | 2010-05-22 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | HA | 2010-05-08
A/duck/Guangxi/GXd-2/2010 | A / H6N2 | HA | 2010-04-02 A/duck/Zhejiang/0224-6/2011 | A / H1N2 | HA | 2011-01-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | HA | 2011-06-01
A/swine/Guangdong/1/2010 | A / H1N1 | HA | 2010-01-15 A/swine/Hubei/101/2009 | A / H1N1 | HA | 2009-08-18
A/swine/Guangdong/05/2009 | A / H1N1 | HA | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | HA | 2009-09-02 A/swine/Guangdong/1/2010 | A / H1N2 | HA | 2010-01-30 A/swine/Hubei/04/2009 | A / H1N2 | HA | 2009-03-10 A/swine/Guangdong/2676/2010 | A / H1N2 | HA | 2010-08-26 A/swine/Guangdong/2712/2010 | A / H1N2 | HA | 2010-08-26 A/swine/Hong Kong/2237/2010 | A / H1N2 | HA | 2010-08-02 A/Beijing/01/2009 | A / H1N1 | HA | 2009-05-15 A/GuangzhouSB/01/2009 | A / H1N1 | HA | 2009-05-17 A/Nanjing/2/2009 | A / H1N1 | HA | 2009-06-17 A/Shandong/1/2009 | A / H1N1 | HA | 2009-05-10 A/Jiangsu/S61/2009 | A / H1N1 | HA | 2009-11-10 A/Guangdong/02/2009 | A / H1N1 | HA | 2009-05-29 A/Zhoushan/52/2009 | A / H1N1 | HA | 2009-12-19 A/Shanghai/37T/2009 | A / H1N1 | HA | 2009-05-24 A/Shanghai/60T/2009 | A / H1N1 | HA | 2009-05-28 A/Zhejiang/2/2009 | A / H1N1 | HA | 2009-05-31
99
8699
748099
90
99
99
99
99
9999
868899
98849896
99
99
99
99
9799
99
99
99
78
9996
99
99
98
99
99
80
9994
99
99
avian flu
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
5_NP
avian flu
human H1N1pdm09
swine flu
human H3N2
A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | NP A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | NP A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | NP A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | NP A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | NP A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | NP A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | NP
A/chicken/Zhejiang/611/2011 | A / H9N2 | NP | 2011-06-01 A/chicken/Shanghai/C1/2012 | A / H9N2 | NP | 2012-01-01
A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | NP A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | NP
A/duck/Guangxi/GXd-5/2010 | A / H6N1 | NP | 2010-05-08 A/duck/Jiangsu/m234/2012 | A / H5N2 | NP | 2012-01-18 A/duck/Jiangsu/1-15/2011 | A / H4N2 | NP | 2011-01-12
A/duck/Jiangsu/4/2010 | A / H3N6 | NP | 2010-03-01 A/duck/Hubei/5/2010 | A / H6N6 | NP | 2010-05-22 A/baikal teal/Xianghai/421/2011 | A / H9N2 | NP | 2011-10-01
A/wild duck/Mongolia/1-241/2008 | A / H7N9 | 2008-04-01 | NP A/swine/Guangdong/K4/2011 | A / H4N8 | NP | 2011-10-21 A/duck/Zhejiang/0224-6/2011 | A / H1N2 | NP | 2011-01-01 A/duck/Zhejiang/10/2011 | A / H7N3 | NP | 2011-06-01 A/duck/Guangdong/W12/2011 | A / H3N2 | NP | 2011-12-22 A/duck/Zhejiang/12/2011 | A / H7N3 | NP | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | NP | 2011-10-01
A/duck/Zhejiang/0611-8/2011 | A / H1N3 | NP | 2011-06-01 A/swine/Hubei/101/2009 | A / H1N1 | NP | 2009-08-18
A/duck/Guangxi/GXd-2/2010 | A / H6N2 | NP | 2010-04-02 A/baikal teal/Xianghai/426/2011 | A / H5N2 | NP | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | NP | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | NP | 2011-10-01 A/green-winged teal/Xianghai/430/2011 | A / H5N2 | NP | 2011-10-01
A/turkey/Minnesota/1/1988 | A / H7N9 | NP | 1988-07-13 A/blue-winged teal/Ohio/566/2006 | A / H7N9 | NP | 2006-01-01
A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | NP | 2011-01-08 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | NP | 1995-05-21
A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | NP | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | NP | 2008-03-05
A/Shanghai/60T/2009 | A / H1N1 | NP | 2009-05-28 A/Shandong/1/2009 | A / H1N1 | NP | 2009-05-10 A/Shanghai/37T/2009 | A / H1N1 | NP | 2009-05-24 A/Guangdong/02/2009 | A / H1N1 | NP | 2009-05-29 A/Zhejiang/2/2009 | A / H1N1 | NP | 2009-05-31 A/Zhoushan/52/2009 | A / H1N1 | NP | 2009-12-19 A/Beijing/01/2009 | A / H1N1 | NP | 2009-05-15 A/Nanjing/2/2009 | A / H1N1 | NP | 2009-06-17 A/Beijing/01/2009 | A / H1N1 | NP | 2009-05-15(2) A/GuangzhouSB/01/2009 | A / H1N1 | NP | 2009-05-17 A/Jiangsu/S61/2009 | A / H1N1 | NP | 2009-11-10
A/swine/Hong Kong/2237/2010 | A / H1N2 | NP | 2010-08-02 A/swine/Hubei/04/2009 | A / H1N2 | NP | 2009-03-10 A/swine/Guangdong/1/2010 | A / H1N2 | NP | 2010-01-30 A/swine/Guangdong/1/2010 | A / H1N1 | NP | 2010-01-15 A/swine/Guangdong/2712/2010 | A / H1N2 | NP | 2010-08-26 A/swine/Guangdong/2676/2010 | A / H1N2 | NP | 2010-08-26
A/swine/Guangdong/09/2009 | A / H1N1 | NP | 2009-09-02 A/swine/Guangdong/05/2009 | A / H1N1 | NP | 2009-05-05
A/Shanghai-Fengxian/1170/2011 | A / H3N2 | NP | 2011-05-10 A/Hunan-Yanfeng/165/2011 | A / H3N2 | NP | 2011-04-14 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | NP | 2011-03-08 A/Jilin-Chuanying/1156/2011 | A / H3N2 | NP | 2011-03-03 A/Shanghai-Luwan/188/2011 | A / H3N2 | NP | 2011-02-14 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | NP | 2011-03-09 A/Tianjin-Hedong/195/2011 | A / H3N2 | NP | 2011-02-15 A/Hunan-Beihu/1143/2011 | A / H3N2 | NP | 2011-03-11 A/Beijing-Xicheng/1409/2011 | A / H3N2 | NP | 2011-02-22 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | NP | 2011-02-20
8189
75
100
100
10099
98
86
100
100
92
100
100
9693
100
96
94
70100
88
99
100
99
100
80
77
100 100100857284
100
0.02
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
avian flu
6_NA
human H3N2
swine flu
human H1N1pdm09
swine flu
A/Hangzhou/1/2013 | A / H7N9 | 2013-03-24 | NA A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | NA A/Hangzhou/3/2013 | A / H7N9 | 2013-04-02 | NA A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | NA A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | NA A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | NA A/Environment/Hangzhou/34/2013 | A / H7N9 | 2013-04-04 | NA A/Hangzhou/2/2013 | A / H7N9 | 2013-03-25 | NA A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | NA A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | NA A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | NA A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | NA A/turkey/Minnesota/1/1988 | A / H7N9 | NA | 1988-07-13 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | NA | 1995-05-21 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | NA | 2008-03-05 A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | NA | 2008-02-07 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | NA | 2011-01-08 A/blue-winged teal/Ohio/566/2006 | A / H7N9 | NA | 2006-01-01
A/duck/Jiangsu/4/2010 | A / H3N6 | NA | 2010-03-01 A/duck/Hubei/5/2010 | A / H6N6 | NA | 2010-05-22
A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | NA | 2011-10-01 A/green-winged teal/Xianghai/430/2011 | A / H5N2 | NA | 2011-10-01 A/baikal teal/Xianghai/426/2011 | A / H5N2 | NA | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | NA | 2011-10-01 A/duck/Guangxi/GXd-2/2010 | A / H6N2 | NA | 2010-04-02 A/baikal teal/Xianghai/421/2011 | A / H9N2 | NA | 2011-10-01 A/duck/Zhejiang/0224-6/2011 | A / H1N2 | NA | 2011-01-01
A/duck/Jiangsu/1-15/2011 | A / H4N2 | NA | 2011-01-12 A/duck/Jiangsu/m234/2012 | A / H5N2 | NA | 2012-01-18 A/duck/Guangdong/W12/2011 | A / H3N2 | NA | 2011-12-22 A/chicken/Zhejiang/611/2011 | A / H9N2 | NA | 2011-06-01 A/chicken/Shanghai/C1/2012 | A / H9N2 | NA | 2012-01-01 A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | NA A/swine/Guangdong/1/2010 | A / H1N2 | NA | 2010-01-30 A/swine/Hubei/04/2009 | A / H1N2 | NA | 2009-03-10 A/swine/Guangdong/2712/2010 | A / H1N2 | NA | 2010-08-26 A/swine/Guangdong/2676/2010 | A / H1N2 | NA | 2010-08-26 A/swine/Hong Kong/2237/2010 | A / H1N2 | NA | 2010-08-02 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | NA | 2011-05-10 A/Jilin-Chuanying/1156/2011 | A / H3N2 | NA | 2011-03-03 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | NA | 2011-03-08 A/Hunan-Yanfeng/165/2011 | A / H3N2 | NA | 2011-04-14 A/Shanghai-Luwan/188/2011 | A / H3N2 | NA | 2011-02-14 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | NA | 2011-02-20 A/Hunan-Beihu/1143/2011 | A / H3N2 | NA | 2011-03-11 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | NA | 2011-03-09 A/Beijing-Xicheng/1409/2011 | A / H3N2 | NA | 2011-02-22 A/Tianjin-Hedong/195/2011 | A / H3N2 | NA | 2011-02-15
A/duck/Zhejiang/10/2011 | A / H7N3 | NA | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | NA | 2011-10-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | NA | 2011-06-01 A/duck/Zhejiang/12/2011 | A / H7N3 | NA | 2011-06-01
A/swine/Guangdong/K4/2011 | A / H4N8 | NA | 2011-10-21 A/swine/Guangdong/05/2009 | A / H1N1 | NA | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | NA | 2009-09-02 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | NA | 2010-05-08
A/swine/Hubei/101/2009 | A / H1N1 | NA | 2009-08-18 A/swine/Guangdong/1/2010 | A / H1N1 | NA | 2010-01-15 A/GuangzhouSB/01/2009 | A / H1N1 | NA | 2009-05-17 A/Nanjing/2/2009 | A / H1N1 | NA | 2009-06-17 A/Beijing/01/2009 | A / H1N1 | NA | 2009-05-15 A/Beijing/01/2009 | A / H1N1 | NA | 2009-05-15(2) A/Guangdong/02/2009 | A / H1N1 | NA | 2009-05-29 A/Shandong/1/2009 | A / H1N1 | NA | 2009-05-10 A/Shanghai/37T/2009 | A / H1N1 | NA | 2009-05-24 A/Shanghai/60T/2009 | A / H1N1 | NA | 2009-05-28 A/Zhejiang/2/2009 | A / H1N1 | NA | 2009-05-31 A/Zhoushan/52/2009 | A / H1N1 | NA | 2009-12-19 A/Jiangsu/S61/2009 | A / H1N1 | NA | 2009-11-10
100
98
94
100
95
8484
87
97
95
97
82
88
90
8972
100
9594
92
9295
95
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
7_MP
avian flu
human H1N1pdm09
swine flu
human H3N2
swine flu
A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | MP A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | MP A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | MP A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | MP A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | MP A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | MP A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | MP A/Hangzhou/1/2013 | A / H7N9 | 2013-03-24 | MP A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | MP
A/chicken/Shanghai/C1/2012 | A / H9N2 | MP | 2012-01-01 A/chicken/Zhejiang/611/2011 | A / H9N2 | MP | 2011-06-01 A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | MP
A/duck/Jiangsu/4/2010 | A / H3N6 | MP | 2010-03-01 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | MP | 2010-05-08
A/duck/Hubei/5/2010 | A / H6N6 | MP | 2010-05-22 A/duck/Guangxi/GXd-2/2010 | A / H6N2 | MP | 2010-04-02
A/duck/Jiangsu/10-d4/2011 | A / H11N3 | MP | 2011-10-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | MP | 2011-06-01 A/duck/Zhejiang/12/2011 | A / H7N3 | MP | 2011-06-01 A/duck/Zhejiang/10/2011 | A / H7N3 | MP | 2011-06-01
A/swine/Guangdong/K4/2011 | A / H4N8 | MP | 2011-10-21 A/baikal teal/Xianghai/421/2011 | A / H9N2 | MP | 2011-10-01 A/green-winged teal/Xianghai/430/2011 | A / H5N2 | MP | 2011-10-01
A/canvasback/Xianghai/428/2011 | A / H5N2 | MP | 2011-10-01 A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | MP | 2011-10-01 A/baikal teal/Xianghai/426/2011 | A / H5N2 | MP | 2011-10-01
A/duck/Zhejiang/0224-6/2011 | A / H1N2 | MP | 2011-01-01 A/duck/Guangdong/W12/2011 | A / H3N2 | MP | 2011-12-22
A/duck/Jiangsu/1-15/2011 | A / H4N2 | MP | 2011-01-12 A/duck/Jiangsu/m234/2012 | A / H5N2 | MP | 2012-01-18
A/swine/Guangdong/2676/2010 | A / H1N2 | MP | 2010-08-26 A/swine/Guangdong/2712/2010 | A / H1N2 | MP | 2010-08-26
A/swine/Guangdong/1/2010 | A / H1N1 | MP | 2010-01-15 A/swine/Hong Kong/2237/2010 | A / H1N2 | MP | 2010-08-02
A/swine/Hubei/101/2009 | A / H1N1 | MP | 2009-08-18 A/Zhejiang/2/2009 | A / H1N1 | MP | 2009-05-31 A/Beijing/01/2009 | A / H1N1 | MP | 2009-05-15 A/Beijing/01/2009 | A / H1N1 | MP | 2009-05-15(2) A/Nanjing/2/2009 | A / H1N1 | MP | 2009-06-17 A/GuangzhouSB/01/2009 | A / H1N1 | MP | 2009-05-17 A/Shandong/1/2009 | A / H1N1 | MP | 2009-05-10 A/Jiangsu/S61/2009 | A / H1N1 | MP | 2009-11-10 A/Zhoushan/52/2009 | A / H1N1 | MP | 2009-12-19 A/Guangdong/02/2009 | A / H1N1 | MP | 2009-05-29 A/Shanghai/37T/2009 | A / H1N1 | MP | 2009-05-24 A/Shanghai/60T/2009 | A / H1N1 | MP | 2009-05-28
A/blue-winged teal/Ohio/566/2006 | A / H7N9 | MP | 2006-01-01 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | MP | 2011-01-08 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | MP | 1995-05-21 A/turkey/Minnesota/1/1988 | A / H7N9 | MP | 1988-07-13
A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | MP | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | MP | 2008-03-05
A/swine/Guangdong/05/2009 | A / H1N1 | MP | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | MP | 2009-09-02
A/swine/Guangdong/1/2010 | A / H1N2 | MP | 2010-01-30 A/swine/Hubei/04/2009 | A / H1N2 | MP | 2009-03-10
A/Hunan-Yanfeng/165/2011 | A / H3N2 | MP | 2011-04-14 A/Jilin-Chuanying/1156/2011 | A / H3N2 | MP | 2011-03-03 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | MP | 2011-03-08 A/Shanghai-Luwan/188/2011 | A / H3N2 | MP | 2011-02-14 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | MP | 2011-05-10 A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | MP | 2011-03-09 A/Tianjin-Hedong/195/2011 | A / H3N2 | MP | 2011-02-15 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | MP | 2011-02-20 A/Beijing-Xicheng/1409/2011 | A / H3N2 | MP | 2011-02-22 A/Hunan-Beihu/1143/2011 | A / H3N2 | MP | 2011-03-11
92
74
97
91
100
100
100100
100
99
88
100
100
100
100
100
88100
100
100
100
97
7789
100
88100
0.01
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
avian flu
human H1N1pdm09
swine flu
human H3N2
8_NS A/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-03 | NS A/chicken/Zhejiang/DTID-ZJU01/2013 | A / H7N9 | 2013-04-01 | NS A/Shanghai/1/2013 | A / H7N9 | 2013-01-01 | NS A/Pigeon/Shanghai/S1069/2013 | A / H7N9 | 2013-04-02 | NS A/Environment/Shanghai/S1088/2013 | A / H7N9 | 2013-04-03 | NS A/Chicken/Shanghai/S1053/2013 | A / H7N9 | 2013-04-03 | NS A/Shanghai/2/2013 | A / H7N9 | 2013-01-01 | NS A/Anhui/1/2013 | A / H7N9 | 2013-01-01 | NS
A/brambling/Beijing/16/2012 | A / H9N2 | 2012-11-07 | NS A/chicken/Zhejiang/611/2011 | A / H9N2 | NS | 2011-06-01
A/chicken/Shanghai/C1/2012 | A / H9N2 | NS | 2012-01-01 A/duck/Hubei/5/2010 | A / H6N6 | NS | 2010-05-22 A/duck/Guangxi/GXd-5/2010 | A / H6N1 | NS | 2010-05-08
A/swine/Guangdong/K4/2011 | A / H4N8 | NS | 2011-10-21 A/duck/Guangdong/W12/2011 | A / H3N2 | NS | 2011-12-22
A/duck/Jiangsu/m234/2012 | A / H5N2 | NS | 2012-01-18 A/duck/Jiangsu/1-15/2011 | A / H4N2 | NS | 2011-01-12
A/green-winged teal/Xianghai/430/2011 | A / H5N2 | NS | 2011-10-01 A/duck/Guangxi/GXd-2/2010 | A / H6N2 | NS | 2010-04-02
A/duck/Zhejiang/0224-6/2011 | A / H1N2 | NS | 2011-01-01 A/duck/Jiangsu/4/2010 | A / H3N6 | NS | 2010-03-01
A/spot-billed duck/Xianghai/427/2011 | A / H5N2 | NS | 2011-10-01 A/canvasback/Xianghai/428/2011 | A / H5N2 | NS | 2011-10-01 A/baikal teal/Xianghai/426/2011 | A / H5N2 | NS | 2011-10-01
A/baikal teal/Xianghai/421/2011 | A / H9N2 | NS | 2011-10-01 A/duck/Zhejiang/10/2011 | A / H7N3 | NS | 2011-06-01 A/duck/Zhejiang/0611-8/2011 | A / H1N3 | NS | 2011-06-01 A/duck/Jiangsu/10-d4/2011 | A / H11N3 | NS | 2011-10-01
A/duck/Zhejiang/12/2011 | A / H7N3 | NS | 2011-06-01 A/ruddy turnstone/Delaware Bay/220/1995 | A / H7N9 | NS | 1995-05-21
A/turkey/Minnesota/1/1988 | A / H7N9 | NS | 1988-07-13 A/blue-winged teal/Ohio/566/2006 | A / H7N9 | NS | 2006-01-01 A/northern shoverl/Mississippi/11OS145/2011 | A / H7N9 | NS | 2011-01-08
A/blue-winged teal/Guatemala/CIP049-01/2008 | A / H7N9 | NS | 2008-02-07 A/blue-winged teal/Guatemala/CIP049-02/2008 | A / H7N9 | NS | 2008-03-05
A/swine/Hubei/101/2009 | A / H1N1 | NS | 2009-08-18 A/Chongqing-Wanzhou/182/2011 | A / H3N2 | NS | 2011-02-20 A/Beijing-Xicheng/1409/2011 | A / H3N2 | NS | 2011-02-22 A/Hunan-Beihu/1143/2011 | A / H3N2 | NS | 2011-03-11 A/Tianjin-Hedong/195/2011 | A / H3N2 | NS | 2011-02-15
A/Heilongjiang-Xiangyang/1125/2011 | A / H3N2 | NS | 2011-03-09 A/Shanghai-Fengxian/1170/2011 | A / H3N2 | NS | 2011-05-10
A/Shanghai-Luwan/188/2011 | A / H3N2 | NS | 2011-02-14 A/Jilin-Chuanying/1156/2011 | A / H3N2 | NS | 2011-03-03 A/Heilongjiang-Nangang/124/2011 | A / H3N2 | NS | 2011-03-08 A/Hunan-Yanfeng/165/2011 | A / H3N2 | NS | 2011-04-14
A/swine/Guangdong/05/2009 | A / H1N1 | NS | 2009-05-05 A/swine/Guangdong/09/2009 | A / H1N1 | NS | 2009-09-02
A/swine/Guangdong/2676/2010 | A / H1N2 | NS | 2010-08-26 A/swine/Guangdong/2712/2010 | A / H1N2 | NS | 2010-08-26 A/swine/Guangdong/1/2010 | A / H1N1 | NS | 2010-01-15
A/swine/Hubei/04/2009 | A / H1N2 | NS | 2009-03-10 A/swine/Guangdong/1/2010 | A / H1N2 | NS | 2010-01-30 A/swine/Hong Kong/2237/2010 | A / H1N2 | NS | 2010-08-02
A/GuangzhouSB/01/2009 | A / H1N1 | NS | 2009-05-17 A/Beijing/01/2009 | A / H1N1 | NS | 2009-05-15(2) A/Shandong/1/2009 | A / H1N1 | NS | 2009-05-10 A/Nanjing/2/2009 | A / H1N1 | NS | 2009-06-17 A/Beijing/01/2009 | A / H1N1 | NS | 2009-05-15 A/Shanghai/37T/2009 | A / H1N1 | NS | 2009-05-24 A/Shanghai/60T/2009 | A / H1N1 | NS | 2009-05-28 A/Guangdong/02/2009 | A / H1N1 | NS | 2009-05-29 A/Zhejiang/2/2009 | A / H1N1 | NS | 2009-05-31 A/Jiangsu/S61/2009 | A / H1N1 | NS | 2009-11-10 A/Zhoushan/52/2009 | A / H1N1 | NS | 2009-12-19
7098
98
75
100
100
88100
100
99
82100
100
100
99
100
100
100
100
100
100
98
100
96
80
9388
Data source : GISAID http://platform.gisaid.org/epi3/frontend#5f426b
新潟大学大学院 医歯学総合研究科 国際保健学分野
Influenza H7N9 Reassortant
2011 2012 2013
H9N2 chickenA/chicken/Zhejiang/611/2011
H7N9 wild bird
H7N3 duck
H9N2 chickenA/chicken/Shanghai/C1/2012
H7N9 human
A/Shanghai/1/2013
H7N9 humanA/Shanghai/2/2013
A/Anhui/2/2013
A/duck/Zhejiang/12/2011
NA
HA
NP
内部遺伝子
A/Zhejiang/DTID-ZJU01/2013
新潟大学大学院 医歯学総合研究科 国際保健学分野
We gratefully acknowledge the authors, originating and submitting laboratories of the sequences from GISAID’s EpiFlu Database on these analysis is based. The list is detailed below.
All submitters of data may be contacted directly via the GISAID website www.gisaid.org or click on the links above (requires registration with GISAID)
Isolate IDSegment
sCountr
yCollection date Isolate name Originating/Submitting Lab. Submitter
EPI_ISL_138737
8 segments China 26 February 2013 A/Shanghai/1/2013 WHO Chinese National Influenza Center Yang, Lei
EPI_ISL_138738
8 segments China 05 March 2013 A/Shanghai/2/2013 WHO Chinese National Influenza Center Yang, Lei
EPI_ISL_138739
8 segments China 20 March 2013 A/Anhui/1/2013 WHO Chinese National Influenza Center Yang, Lei
EPI_ISL_138977
8 segments China 24 March 2013 A/Hangzhou/1/2013 Hangzhou Center for Disease Control and Prevention
Li, Jun
EPI_ISL_138985
8 segments China 02 April 2013 A/Pigeon/Shanghai/S1069/2013 Harbin Veterinary Research Institute Kong, Huihui
EPI_ISL_138984
8 segments China 03 April 2013 A/Environment/Shanghai/S1088/2013
Harbin Veterinary Research Institute Kong, Huihui
EPI_ISL_138983
8 segments China 03 April 2013 A/Chicken/Shanghai/S1053/2013 Harbin Veterinary Research Institute Kong, Huihui
EPI_ISL_139364 8 segments China April 2013 A/Zhejiang/DTID-ZJU01/2013 State Key Laboratory of Diagnosis and Treatment of Infectious Diseases, Zhejiang University
EPI_ISL_139501 8 segments China April 2013 A/chicken/Zhejiang/DTID-ZJU01/2013 State Key Laboratory of Diagnosis and Treatment of Infectious Diseases, Zhejiang University
新潟大学大学院 医歯学総合研究科 国際保健学分野