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Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 1
The Biopharma Navigator
Semantics in action: up-to-date access and analytics of millions of Life Science documents
Stefan Geißler, Managing Director, Expert System Deutschland GmbH
ICIC, Heidelberg, Oct 2016
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 2
The challenge
• Many questions and analysis tasks involve huge volumes of unstructured data– Which expert is working on which topic?– In which stage is my competitor’s drug development?– What adverse events have been reported?– …
• Many of these require accessing large heterogeneous data sets– Scientific publications– Patents– News– FDA reports
• How to facilitate and accelerate these types of investigations?
Making search and analysis for researchers and analysts easier and more efficient
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 3
Introducing the Biopharma Navigator
Semantically enriched, quality approved, up-to-date information at your fingertips
What is happening? E.G. Chart the landscape of ongoing trials
What is happening? E.G. Chart the landscape of ongoing trials
Where and by whom: Find me experts and their affiliations
Where and by whom: Find me experts and their affiliations
When: Chronological overview on current topics
When: Chronological overview on current topics
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 4
Data Sources
Area of Interest
Publications
MEDLINE
DailyGrants
NIH
Weekly
Patents
USPTO
Weekly
News Releases
Every 30 Minutes
Regulatory Data
FDA Adverse Events
FDA Release Schedule
Clinical Trials
USA, Europe, WHO, etc.
Daily to Weekly
Experts
Multiple Sources
Daily
Subscription and Internal Data
Sources
Subscription and Internal Data
Sources
>15M
>400K
>1.3M
>1.4M>41M
>360K
>9M
Other SourcesOther Sources
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 5
Vocabularies
ConditionDisease, Disorder, Syndrome
InterventionDrugs-Chemical
& Biological type
Mechanism of Action
OrganizationCompanies, Universities, Agencies, Institutions
Source: Medical Subject Headings (MeSH) subset
Source: ChemID Plus & Enriched by us
Source: National Drug File Reference Terminology (NDFRT) & Enriched by us
Source: Created & Enriched by us
All vocabularies are reviewed, curated and updated on an on-going basis
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 6
From query to overviewClean, normalized results based on semantic processing
Conditions Sponsors Country
Interventions MoAs Phases
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Compile complex information into easy-to-digest dashboards
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 8
The Biopharma Navigator• The Biopharma Navigator is online at
https://www.biopharmanavigator.com/bpn
• Free test account on request (see above)
• Currently almost 1000 experts from the industry are using the system. The key client in Sanofi with more than 900 users.
• Online presentation by Archna Bhandari & Stefan Geißler from Expert System with an Introduction from Matthias Staab, Global Head - Published Information Access at Sanofi, at https://vimeo.com/160332655
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 9
Introducing Expert System
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• The leading pure-player in semantics & cognitive computing platform: Cogito• More than 220 people – present in 7 countries• Multilingual Cognitive Computing, Natural Language Understanding, Information
Extraction and Document Categorization• Merged with TEMIS in 2015
• The leading pure-player in semantics & cognitive computing platform: Cogito• More than 220 people – present in 7 countries• Multilingual Cognitive Computing, Natural Language Understanding, Information
Extraction and Document Categorization• Merged with TEMIS in 2015
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 11
Expert System clients from Health & Life Sciences
STM Publishing Life Sciences
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 12
What is a semantic platform?
Our semantic network is a rich map of definitions of words and associations
between words.
Semantic network (language ontology) to remove ambiguity.
Sensigrafo4 million concepts/ 6 million relations
Copyright © 2016 Expert System Enterprise - All Rights Reserved - Slide 13
Metadata generation via our API’s
http://www.intelligenceapi.com