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The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years Liliana M. Dávalos National Science Foundation 15 July 2016

The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

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Page 1: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years

Liliana M. Dávalos

National Science Foundation15 July 2016

!

Page 2: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Who am I? Evolution & Conservation

Page 3: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Our research mission

Biological diversityDiversification Extinction

Page 4: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Focus first part

Biological diversity

Colonization, speciation Extinctionincrease decrease

Page 5: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

The debate: equilibrium

• Spp. richness ~ resource abundance

• Long-term spp. richness stable

• Diversity dynamics follow predictable course after perturbation

Page 6: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

The debate: disequilibrium

• Communities are unsaturated

• Disturbance prevents communities from reaching equilibria

• Dispersal limitation slows reaching equilibrium

Page 7: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Elements of the equilibrium model MacArthur & Wilson 1963 Evolution

Page 8: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Most common application

Morgan & Woods 1986 Biol. J. Linnean Soc.

Page 9: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Extended application Dávalos & Russell 2012 Ecol. Evol.

Page 10: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Change in habitat ~ change in spp. Dávalos & Russell 2012 Ecol. Evol.

Page 11: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

But larger Greater Antilles < spp. than expected Dávalos & Russell 2012 Ecol. Evol.

Page 12: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

But what about the dynamics over time? Rabosky & Hurlbert 2015 Am. Nat.

Page 13: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Phylogenies and equilibrium

• Test of MW evolutionary equilibrium dynamics using phylogenies

Ricklefs & Bermingham 2001 Science

Page 14: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

A model including speciation Valente et al. 2015 Ecol. Lett.

Page 15: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Key findings from model comparison

• Disequilibrium in most bird groups

• Tendency to equilibrium in Darwin’s finches

• Diversity-dependent

• Together, community dynamics are non-equilibrial

Valente et al. 2015 Ecol. Lett.

Page 16: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Rojas et al. 2016 Syst. Biol.

Page 17: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Rojas et al. 2016 Syst. Biol.

Page 18: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Figure 2

Ametrida Sphaeronycteris Centurio Pygoderma Ardops Ariteus Phyllops

† Phyllops silvai† Phyllops vetus

Stenoderma † Cubanycteris silvai

Artibeus (Artibeus)

† Artibeus anthonyiArtibeus (Koopmania)

Artibeus (Dermanura)

Ectophylla Enchisthenes Chiroderma Vampyressa (Vampyriscus)

Vampyressa (Metavampyressa)

Mesophylla

Vampyressa (Vampyressa)

Platyrrhinus Vampyrodes Uroderma

12 10 8 6 4 2 0

Mil l ion years before present

S A

M2.83

1.780.28

0.12

2.60

1.02

Founder-event dispersal(20% of cladogenetic events)

S A

M

1.13

0.32

6.465.04 0.68

0.73

Anagenetic dispersal(33% of cladogenetic events)

Miocene Pliocene

Tavares et al. in prep.

Page 19: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

How old are the Greater Antilles? 35 Ma?

Iturralde-Vinent & MacPhee 1999 Bull. Am. Mus. Nat. Hist

Page 20: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Input data on Greater Antillean bats Valente, Etienne, Dávalos in review

Page 21: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Equilibrium dynamics! Valente, Etienne, Dávalos in review

Age Ma

λc μ γ λa

20 0.28 0.33 0.030 0.1945 0.32 0.41 0.036 0.16

Page 22: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

What happens if no fossils? Valente, Etienne, Dávalos in review

Age Ma

λc μ γ λa

20 0.22 0.26 0.017 0.2745 0.26 0.35 0.021 0.27

Page 23: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Why are so many bats extinct? Climate? Humans?

Page 24: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

It’s looking more and more like humans Stoetzel et al. 2016 Quat. Sci. Rev.

Page 25: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

0 10 20 30 40

020

4060

80

Num

ber o

f end

emic

spe

cies

0 10 20 30 40

010

2030

4050

Num

ber o

f end

emic

spe

cies

Time (Ma)Time (Ma)

BA

How long to restore the species? Valente, Etienne, Dávalos in review

Page 26: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Conclusions part I

• First proposed in the 1960s, some evolutionary aspects of equilibrium theory can only be tested now

• Using phylogenies

• Longstanding questions remain to be answered, e.g.,

• is diversity predictable?

• relative contribution biotic vs. abiotic factors

Photo by Jon Flanders

Page 27: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

More conclusions part I

• Need to include extinct species

• Underestimate extinction rate (obvious)

• Underestimate immigration rate (less obvious)

• Human effects large

• Long time to recovery

• Habitat change probably important Dávalos & Russell 2012 Ecol. Evol.

Page 28: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Focus second part

Biological diversity

Colonization, speciation

Land use changeincrease decrease

Page 29: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

When the UN comes knocking The Special Session of 2016

Page 30: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

But illicit crops are everywherePrevious focus on

Colombia

Page 31: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Why tropical deforestation? I

• 2 models

• Immiserization:

• poor growers bring marginal land into production

• external shocks (e.g., debt crisis)

• internal dynamics (e.g., demographic growth)

Rudel & Roper 1997 World Dev.

Page 32: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Why tropical deforestation? II

• Frontier:

• investors/government build roads

• roads bring colonization

• colonists clear land

• frontier stabilizes (development),

• or recedes (hollow frontier)

Rudel & Roper 1997 World Dev.

Page 33: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

1400

1600

1800

2000

2200●

●●

3035404550

Forest

NP

1500

2000

2500

●●

28 30 32 34 36 38 40

Pasture

150200250300350400

●●

0.51.01.52.02.5

Coca

500

550

600

650

700 ●●

●●

3035404550

PA

(ha)

150

200

250

300

350

●●

●●

● ●

28 30 32 34 36 38 40

2468101214

●●●

●●

0.51.01.52.02.5

90

100

110

3035404550PLAND

EN

N (m

)

95100105110115120

● ●

28 30 32 34 36 38 40PLAND

300

400

500

600

0.51.01.52.02.5PLAND

Figure 2

BA

G

C

E FD

H I

253035404550

2001 2004 2007 201025

30

35

40

2001 2004 2007 2010

1

2

3

2001 2004 2007 2010

PLA

ND

K L M

The closing of the forest frontier

• An example from Guaviare, Colombia

• Forest declines, pastures increase

• Forest fragments become smaller and more isolated

• New stable equilibrium loses forest almost completely

Dávalos et al. 2014 Biol. Cons.

Page 34: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Where do illicit crops grow?

• In 2000s Colombia

• Correspond to forest frontier

• Interface between settled land and forests

• Spatially clustered

Dávalos et al. 2011 Environ. Sci. Technol.

Page 35: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

What happened in the 1960s? Etter et al. 2006 J. Environ. Manage.

Page 36: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Opening the frontier Denevan 1966 Geogr. Rev.

Page 37: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Roads and colonization projects

Brücher 1977 Geogr. Z. Schuurman 1978 Tijdschr. Econ. Soc. Ge.

Page 38: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Brazil

Bolivia

Peru

Colombia

Ecuador

Coca cultivation

Government-sponsored

before 1979

1990/1992

Projects

Coca cultivation

High

Low

2014

Percent forest Probability of coca

a b c

A remarkable spatial pattern

Dávalos, Sanchez, Armenteras in revision

Page 39: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Brazil

Bolivia

Peru

Colombia

Ecuador

Coca cultivation

Government-sponsored

before 1979

1990/1992

Projects

Coca cultivation

Percent forest

a b

Location of projects ~ C emissions Harris et al. 2012 Science

Page 40: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Coca cultivation

High

Low

2014

Percent forestHigh

Low

Probability of coca

b c

Is coca spatially clustered around projects? Dávalos, Sanchez, Armenteras in revision

Page 41: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

High

Low

Probability of coca

c

~40 years later, Amazonia coca remains clustered Dávalos, Sanchez, Armenteras in revision

Parameter 2.5 Mean 97.5Intercept -1.2671 -1.1540 -1.0410Distance to nearest project

-0.6096 -0.5613 -0.5129

Precision municipality intercept

1.116 1.4582 1.910

Precision spatial

0.243 0.5211 1.079

Page 42: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Coca is spatially associated with the frontier UNODC 2016

Page 43: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Can coca explain some deforestation?

• Three independent studies say no

• Dávalos et al. 2011 Environ. Sci. Technol. no effect after including social factors

• Armenteras et al. 2013 Reg. Environ. Change no effect of coca in Amazon

• Sánchez-Cuervo et al. 2013 Ecosystems no effect any time or place Photo by Ana Luz Porzecanski

Page 44: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

No relationship coca cultivation ~ deforestation

ratesUnpublished

Page 45: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Conclusions part II

• Actions from 4 decades ago have large effects

• Brought colonists to the Amazon

• Farmers turned to coca

• Landscapes transform following roads

• End point often minimal forest

Photo by OSITRAN, Peru

Page 46: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

More conclusions part II

• Spatial patterns misleading without history

• History illuminates the opening of the frontier

• Frontier deforestation can be connected to poverty

• But actually requires investment, e.g.,

• Roads

• Development projects

Page 47: The importance of models —dynamics of extinction and their drivers from the Miocene to the last 40 years (v.1)

Thanks!