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lokosoo documents
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Mousa Rebouh- Topological Analysis of a Site-Specific Recombination Reaction
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Peter Virnau- Knots in Macromolecular Systems: Concepts and Challenges
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Robert Planque- The role of knot theory in DNA research
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Edward N. Trifonov and Igor N. Berezovsky- Evolutionary Aspects of Protein Structure and Folding
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Steven A. Wasserman and Nicholas R. Cozzarelli- Supercoiled DNA-directed Knotting by T4 Topoisomerase
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Mariel Vazquez, Sean D. Colloms and De Witt Sumners- Tangle Analysis of Xer Recombination Reveals only Three Solutions, all Consistent with a Single Threedimensional Topological Pathway
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R.Daniel Camerini-Otero and Gary Felsenfeld- Supercoiling energy and nucleosome formation: the role of the arginine-rich histone kerne
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James C. Wang- Helical repeat of DNA in solution
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H.J. Vollenweider, TH. Koller, J. Parello and J.M. Sogo- Superstructure of linear duplex DNA
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Maher Moakher and John H. Maddocks- A Double-Strand Elastic Rod Theory
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Hong Qian- Terminal Twist Induced Continuous Writhe of a Circular Rod with Intrinsic Curvature
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T.K. Caughey- Whirling of a Heavy Chain
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S. Neukirch, G.H.M. van der Heijden and J.M.T. Thompson- Writhing instabilities of twisted rods: from infinite to finite length
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Kathleen A. Hoffman, Robert S. Manning and Randy C. Paffenroth- Calculation of the Stability Index in Parameter-Dependent Calculus of Variations Problems: Buckling of a Twisted Elastic
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Joceline Lega & Alain Goriely- Pulses, fronts and oscillations of an elastic rod
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Bernard D. Coleman, Irwin Tobias, and David Swigon- Theory of the influence of end conditions on self-contact in DNA loops
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David Swigon, Bernard D. Coleman and Irwin Tobias- The Elastic Rod Model for DNA and Its Application to the Tertiary Structure of DNA Minicircles in Mononucleosomes
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Irwin Tobias, David Swigon and Bernard D. Coleman- Elastic stability of DNA configurations. I. General theory
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Bernard D. Coleman, David Swigon and Irwin Tobias- Elastic stability of DNA configurations. II. Supercoiled plasmids with self-contact
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Bernard D. Coleman and David Swigon- Theory of Supercoiled Elastic Rings with Self-Contact and Its Application to DNA Plasmids
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Bernard D. Coleman, Wilma K. Olson and David Swigon- Theory of sequence-dependent DNA elasticity
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